RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W GTR1Q00582 310 aa2.48□□□□□ -2.01
SNC1YAL030W SLU7Q02775 382 aaKnown RBP2.48□□□□□ -2.01
SNC1YAL030W GCN5Q03330 439 aa2.48□□□□□ -2.01
SNC1YAL030W PLB2Q03674 706 aa2.48□□□□□ -2.01
SNC1YAL030W CIA1Q05583 330 aa2.48□□□□□ -2.01
SNC1YAL030W RXT3Q07458 294 aa2.48□□□□□ -2.01
SNC1YAL030W VHS3Q08438 674 aa2.48□□□□□ -2.01
SNC1YAL030W SGO1Q08490 590 aa2.48□□□□□ -2.01
SNC1YAL030W SSP2Q08646 371 aa2.48□□□□□ -2.01
SNC1YAL030W NEW1Q08972 1196 aaKnown RBP2.48□□□□□ -2.01
SNC1YAL030W NPC2Q12408 173 aa2.48□□□□□ -2.01
SNC1YAL030W TRM11Q12463 433 aa2.48□□□□□ -2.01
SNC1YAL030W SSM4P40318 1319 aa2.47□□□□□ -2.01
SNC1YAL030W VAS1P07806 1104 aaKnown RBP2.47□□□□□ -2.01
SNC1YAL030W ADH4P10127 382 aa2.47□□□□□ -2.01
SNC1YAL030W MTF2P10849 440 aa2.47□□□□□ -2.01
SNC1YAL030W YCL049CP25577 312 aa2.47□□□□□ -2.01
SNC1YAL030W CWH43P25618 953 aa2.47□□□□□ -2.01
SNC1YAL030W CDC20P26309 610 aa2.47□□□□□ -2.01
SNC1YAL030W RPN12P32496 274 aa2.47□□□□□ -2.01
SNC1YAL030W SHM2P37291 469 aaKnown RBP2.47□□□□□ -2.01
SNC1YAL030W APM3P38153 483 aa2.47□□□□□ -2.01
SNC1YAL030W PSY4P38193 441 aa2.47□□□□□ -2.01
SNC1YAL030W YHR112CP38716 378 aa2.47□□□□□ -2.01
SNC1YAL030W CCT3P39077 534 aaKnown RBP2.47□□□□□ -2.01
SNC1YAL030W MEF2P39677 819 aa2.47□□□□□ -2.01
SNC1YAL030W SCS2P40075 244 aaKnown RBP2.47□□□□□ -2.01
SNC1YAL030W MAD2P40958 196 aa2.47□□□□□ -2.01
SNC1YAL030W PXA1P41909 870 aa2.47□□□□□ -2.01
SNC1YAL030W BIT61P47041 543 aa2.47□□□□□ -2.01
SNC1YAL030W ECL1P48235 211 aa2.47□□□□□ -2.01
SNC1YAL030W MNT2P53059 558 aa2.47□□□□□ -2.01
SNC1YAL030W GTF1P53260 183 aaPredicted RBP2.47□□□□□ -2.01
SNC1YAL030W NRG1Q03125 231 aa2.47□□□□□ -2.01
SNC1YAL030W RCR2Q03446 210 aaKnown RBP2.47□□□□□ -2.01
SNC1YAL030W ROT1Q03691 256 aa2.47□□□□□ -2.01
SNC1YAL030W YAP6Q03935 383 aa2.47□□□□□ -2.01
SNC1YAL030W VBA4Q04602 768 aaKnown RBP2.47□□□□□ -2.01
SNC1YAL030W PEX19Q07418 342 aa2.47□□□□□ -2.01
SNC1YAL030W ACK1Q07622 623 aaPredicted RBP2.47□□□□□ -2.01
SNC1YAL030W BRE4Q07660 1125 aa2.47□□□□□ -2.01
SNC1YAL030W ISA1Q07821 250 aaPredicted RBP2.47□□□□□ -2.01
SNC1YAL030W ENB1Q08299 606 aa2.47□□□□□ -2.01
SNC1YAL030W PHO5P00635 467 aa2.46□□□□□ -2.02
SNC1YAL030W TUF1P02992 437 aaKnown RBP2.46□□□□□ -2.02
SNC1YAL030W HMG2P12684 1045 aa2.46□□□□□ -2.02
SNC1YAL030W GFA1P14742 717 aaKnown RBP2.46□□□□□ -2.02
SNC1YAL030W RNR1P21524 888 aaKnown RBP2.46□□□□□ -2.02
SNC1YAL030W CBP3P21560 335 aa2.46□□□□□ -2.02
SNC1YAL030W SIR1P21691 654 aa2.46□□□□□ -2.02
SNC1YAL030W KIN82P25341 720 aa2.46□□□□□ -2.02
SNC1YAL030W PRP45P28004 379 aaPredicted RBP2.46□□□□□ -2.02
SNC1YAL030W PRE4P30657 266 aa2.46□□□□□ -2.02
SNC1YAL030W IMP2'P32351 346 aa2.46□□□□□ -2.02
SNC1YAL030W MTC7P32633 139 aa2.46□□□□□ -2.02
SNC1YAL030W MFT1P33441 392 aaKnown RBP2.46□□□□□ -2.02
SNC1YAL030W CTF13P35203 478 aa2.46□□□□□ -2.02
SNC1YAL030W OMA1P36163 345 aa2.46□□□□□ -2.02
SNC1YAL030W NPR3P38742 1146 aa2.46□□□□□ -2.02
SNC1YAL030W RPP1P38786 293 aa2.46□□□□□ -2.02
SNC1YAL030W PPE1P38796 400 aa2.46□□□□□ -2.02
SNC1YAL030W MSS4P38994 779 aa2.46□□□□□ -2.02
SNC1YAL030W STT3P39007 718 aaKnown RBP2.46□□□□□ -2.02
SNC1YAL030W SPC72P39723 622 aa2.46□□□□□ -2.02
SNC1YAL030W NOC2P39744 710 aaKnown RBP2.46□□□□□ -2.02
SNC1YAL030W PRM2P40534 656 aa2.46□□□□□ -2.02
SNC1YAL030W IMA5P40884 581 aa2.46□□□□□ -2.02
SNC1YAL030W BUD8P41698 603 aa2.46□□□□□ -2.02
SNC1YAL030W ERR3P42222 437 aa2.46□□□□□ -2.02
SNC1YAL030W NOP9P47077 666 aaKnown RBP2.46□□□□□ -2.02
SNC1YAL030W ARC35P53731 342 aaKnown RBP2.46□□□□□ -2.02
SNC1YAL030W ESF2P53743 316 aaKnown RBP2.46□□□□□ -2.02
SNC1YAL030W YNR071CP53757 342 aa2.46□□□□□ -2.02
SNC1YAL030W TEX1P53851 422 aaKnown RBP2.46□□□□□ -2.02
SNC1YAL030W MRPL22P53881 309 aa2.46□□□□□ -2.02
SNC1YAL030W MOT3P54785 490 aaKnown RBP2.46□□□□□ -2.02
SNC1YAL030W GAD1Q04792 585 aa2.46□□□□□ -2.02
SNC1YAL030W YLR224WQ05947 369 aa2.46□□□□□ -2.02
SNC1YAL030W VPS36Q06696 566 aa2.46□□□□□ -2.02
SNC1YAL030W CRD1Q07560 283 aa2.46□□□□□ -2.02
SNC1YAL030W DIN7Q12086 430 aa2.46□□□□□ -2.02
SNC1YAL030W RTK1Q12100 620 aaPredicted RBP2.46□□□□□ -2.02
SNC1YAL030W RTP1Q12751 981 aa2.46□□□□□ -2.02
SNC1YAL030W DFG16Q99234 619 aa2.46□□□□□ -2.02
SNC1YAL030W MIS1P09440 975 aaKnown RBP2.45□□□□□ -2.02
SNC1YAL030W BIK1P11709 440 aa2.45□□□□□ -2.02
SNC1YAL030W SEC18P18759 758 aaKnown RBP2.45□□□□□ -2.02
SNC1YAL030W RPA135P22138 1203 aaKnown RBP2.45□□□□□ -2.02
SNC1YAL030W STE11P23561 717 aa2.45□□□□□ -2.02
SNC1YAL030W PEX1P24004 1043 aa2.45□□□□□ -2.02
SNC1YAL030W RER1P25560 188 aa2.45□□□□□ -2.02
SNC1YAL030W KAR4P25583 335 aa2.45□□□□□ -2.02
SNC1YAL030W FRD1P32614 470 aaKnown RBP2.45□□□□□ -2.02
SNC1YAL030W RPT3P33298 428 aaKnown RBP2.45□□□□□ -2.02
SNC1YAL030W SEG2P34250 1132 aa2.45□□□□□ -2.02
SNC1YAL030W RRN3P36070 627 aa2.45□□□□□ -2.02
SNC1YAL030W YHR033WP38690 423 aa2.45□□□□□ -2.02
SNC1YAL030W KAP123P40069 1113 aaKnown RBP2.45□□□□□ -2.02
SNC1YAL030W MNT3P40549 630 aa2.45□□□□□ -2.02
SNC1YAL030W BAP3P41815 604 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms