RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 RNF135Q8IUD6 432 aa5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 NBPF15Q8N660 670 aa5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 PLVAPQ9BX97 442 aa5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 TBC1D2Q9BYX2 928 aa5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 QTRT2Q9H974 415 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 MYH14Q7Z406 1995 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 MYBBP1AQ9BQG0 1328 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 KDM6AO15550 1401 aaPredicted RBP5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 SPDYE3A6NKU9 549 aa5.13□□□□□ -1.59
SMARCE1-215ENST00000578995 ERVH48-1M5A8F1 160 aa5.13□□□□□ -1.59
SMARCE1-215ENST00000578995 MEN1O00255 615 aa5.13□□□□□ -1.59
SMARCE1-215ENST00000578995 AMPHP49418 695 aa5.13□□□□□ -1.59
SMARCE1-215ENST00000578995 CHSY3Q70JA7 882 aa5.13□□□□□ -1.59
SMARCE1-215ENST00000578995 AEBP1Q8IUX7 1158 aa5.13□□□□□ -1.59
SMARCE1-215ENST00000578995 USHBP1Q8N6Y0 703 aa5.13□□□□□ -1.59
SMARCE1-215ENST00000578995 STRN4Q9NRL3 753 aa5.13□□□□□ -1.59
SMARCE1-215ENST00000578995 ATXN7L1Q9ULK2 861 aaPredicted RBP5.13□□□□□ -1.59
SMARCE1-215ENST00000578995 THRAP3Q9Y2W1 955 aaKnown RBP5.13□□□□□ -1.59
SMARCE1-215ENST00000578995 C4AP0C0L4 1744 aa5.13□□□□□ -1.59
SMARCE1-215ENST00000578995 C4BP0C0L5 1744 aa5.13□□□□□ -1.59
SMARCE1-215ENST00000578995 CASZ1Q86V15 1759 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 ZBTB7CA1YPR0 619 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 SPATA31C2B4DYI2 1134 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 ATP5J2-PTCD1G3V325 749 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 C2CD2LO14523 706 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 H2AFB1P0C5Y9 115 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 H2AFB2P0C5Z0 115 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 ARAFP10398 606 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 RAB15P59190 212 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 LBRQ14739 615 aaKnown RBP5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 RIC3Q7Z5B4 369 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 TCP11L2Q8N4U5 519 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 HELBQ8NG08 1087 aaPredicted RBP5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 TRIM11Q96F44 468 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 RSPH6AQ9H0K4 717 aa5.12□□□□□ -1.59
SMARCE1-215ENST00000578995 CACNA1FO60840 1977 aa5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 CYP27B1O15528 508 aa5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 DIAPH1O60610 1272 aaKnown RBP5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 ELNP15502 786 aa5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 RXRBP28702 533 aa5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 PRRT3Q5FWE3 981 aa5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 TOM1L2Q6ZVM7 507 aa5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 TAS1R3Q7RTX0 852 aa5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 SEPT12Q8IYM1 358 aa5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 MARCH10Q8NA82 808 aaPredicted RBP5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 LTV1Q96GA3 475 aaPredicted RBP5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 NLRP3Q96P20 1036 aa5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 PLEKHF1Q96S99 279 aa5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 BEGAINQ9BUH8 593 aa5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 KCPQ6ZWJ8 1503 aa5.11□□□□□ -1.59
SMARCE1-215ENST00000578995 NEURL1BA8MQ27 555 aa5.1□□□□□ -1.59
SMARCE1-215ENST00000578995 PPM1GO15355 546 aaPredicted RBP5.1□□□□□ -1.59
SMARCE1-215ENST00000578995 THBS1P07996 1170 aa5.1□□□□□ -1.59
SMARCE1-215ENST00000578995 IL2RBP14784 551 aa5.1□□□□□ -1.59
SMARCE1-215ENST00000578995 EVA1CP58658 441 aa5.1□□□□□ -1.59
SMARCE1-215ENST00000578995 CNGB1Q14028 1251 aaPredicted RBP5.1□□□□□ -1.59
SMARCE1-215ENST00000578995 BCORQ6W2J9 1755 aa5.1□□□□□ -1.59
SMARCE1-215ENST00000578995 NACC1Q96RE7 527 aa5.1□□□□□ -1.59
SMARCE1-215ENST00000578995 CDCA7Q9BWT1 371 aaPredicted RBP5.1□□□□□ -1.59
SMARCE1-215ENST00000578995 GRIP2Q9C0E4 1043 aa5.1□□□□□ -1.59
SMARCE1-215ENST00000578995 CYLDQ9NQC7 956 aa5.1□□□□□ -1.59
SMARCE1-215ENST00000578995 NLRP2Q9NX02 1062 aa5.1□□□□□ -1.59
SMARCE1-215ENST00000578995 N4BP2Q86UW6 1770 aaPredicted RBP5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 CEMIPQ8WUJ3 1361 aa5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 ZC3H4Q9UPT8 1303 aaKnown RBP5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 A0A1W2PRU2 124 aa5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 CSB-PGBD3P0DP91 1061 aa5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 FGFR3P22607 806 aa5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 PTK2Q05397 1052 aa5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 TTLL12Q14166 644 aaPredicted RBP5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 CSPP1Q1MSJ5 1256 aa5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 FAM182BQ5T319 152 aa5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 SULT6B1Q6IMI4 303 aa5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 PTF1AQ7RTS3 328 aa5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 PNISRQ8TF01 805 aaKnown RBP5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 PHACTR3Q96KR7 559 aa5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 USP35Q9P2H5 1018 aa5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 FKBPLQ9UIM3 349 aa5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 ARID1BQ8NFD5 2236 aaPredicted RBP5.09□□□□□ -1.59
SMARCE1-215ENST00000578995 HMOX1P09601 288 aa5.08□□□□□ -1.6
SMARCE1-215ENST00000578995 PHKG2P15735 406 aa5.08□□□□□ -1.6
SMARCE1-215ENST00000578995 CTBSQ01459 385 aa5.08□□□□□ -1.6
SMARCE1-215ENST00000578995 UBAP2LQ14157 1087 aaKnown RBP5.08□□□□□ -1.6
SMARCE1-215ENST00000578995 MTHFSDQ2M296 383 aaKnown RBP5.08□□□□□ -1.6
SMARCE1-215ENST00000578995 KRT27Q7Z3Y8 459 aa5.08□□□□□ -1.6
SMARCE1-215ENST00000578995 PGBD3Q8N328 593 aa5.08□□□□□ -1.6
SMARCE1-215ENST00000578995 GPAMQ9HCL2 828 aa5.08□□□□□ -1.6
SMARCE1-215ENST00000578995 GPSM3Q9Y4H4 160 aa5.08□□□□□ -1.6
SMARCE1-215ENST00000578995 ANKRD36CQ5JPF3 1778 aa5.08□□□□□ -1.6
SMARCE1-215ENST00000578995 SCN7AQ01118 1682 aa5.08□□□□□ -1.6
SMARCE1-215ENST00000578995 MAP3K5Q99683 1374 aa5.07□□□□□ -1.6
SMARCE1-215ENST00000578995 NUP98P52948 1817 aa5.07□□□□□ -1.6
SMARCE1-215ENST00000578995 PCDH11XQ9BZA7 1347 aa5.07□□□□□ -1.6
SMARCE1-215ENST00000578995 PCDH11YQ9BZA8 1340 aa5.07□□□□□ -1.6
SMARCE1-215ENST00000578995 PRKAR2BP31323 418 aa5.07□□□□□ -1.6
SMARCE1-215ENST00000578995 DDB1Q16531 1140 aa5.07□□□□□ -1.6
SMARCE1-215ENST00000578995 DIEXFQ68CQ4 756 aaKnown RBP5.07□□□□□ -1.6
SMARCE1-215ENST00000578995 ZCRB1Q8TBF4 217 aaKnown RBP5.07□□□□□ -1.6
SMARCE1-215ENST00000578995 ADAM32Q8TC27 787 aa5.07□□□□□ -1.6
SMARCE1-215ENST00000578995 ABHD17AQ96GS6 310 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms