RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 HELBQ8NG08 1087 aaPredicted RBP18.13■□□□□ 0.49
ATP2A2-204ENST00000539276 GTPBP4Q9BZE4 634 aaKnown RBP18.13■□□□□ 0.49
ATP2A2-204ENST00000539276 LRRC24Q50LG9 513 aa18.13■□□□□ 0.49
ATP2A2-204ENST00000539276 NSUN7Q8NE18 718 aaKnown RBP18.13■□□□□ 0.49
ATP2A2-204ENST00000539276 UTP14AQ9BVJ6 771 aaKnown RBP18.13■□□□□ 0.49
ATP2A2-204ENST00000539276 PTPN12Q05209 780 aaKnown RBP18.13■□□□□ 0.49
ATP2A2-204ENST00000539276 PCDHA7Q9UN72 937 aa18.13■□□□□ 0.49
ATP2A2-204ENST00000539276 TMEM131LA2VDJ0 1609 aa18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 CASQ1P31415 396 aa18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 RESTQ13127 1097 aa18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 SKIDA1Q1XH10 827 aa18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 SPECC1Q5M775 1068 aa18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 ANKRD18BA2A2Z9 1011 aa18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 STARD3NLO95772 234 aa18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 HSP90B2PQ58FF3 399 aa18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 TTLL7Q6ZT98 887 aa18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 ANO1Q5XXA6 986 aa18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 ARHGEF25Q86VW2 580 aa18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 PHKBQ93100 1093 aa18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 GPHNQ9NQX3 736 aaPredicted RBP18.12■□□□□ 0.49
ATP2A2-204ENST00000539276 WASF1Q92558 559 aa18.11■□□□□ 0.49
ATP2A2-204ENST00000539276 BMS1Q14692 1282 aaKnown RBP18.11■□□□□ 0.49
ATP2A2-204ENST00000539276 MYL10Q9BUA6 226 aa18.11■□□□□ 0.49
ATP2A2-204ENST00000539276 RAI14Q9P0K7 980 aa18.11■□□□□ 0.49
ATP2A2-204ENST00000539276 PDIA3P30101 505 aaKnown RBP18.11■□□□□ 0.49
ATP2A2-204ENST00000539276 NDUFA8P51970 172 aa18.11■□□□□ 0.49
ATP2A2-204ENST00000539276 ATL3Q6DD88 541 aa18.11■□□□□ 0.49
ATP2A2-204ENST00000539276 B4E1Z4 1266 aa18.1■□□□□ 0.49
ATP2A2-204ENST00000539276 MAP3K12Q12852 859 aa18.1■□□□□ 0.49
ATP2A2-204ENST00000539276 XAGE2Q96GT9 111 aa18.1■□□□□ 0.49
ATP2A2-204ENST00000539276 GTF2F1P35269 517 aaKnown RBP eCLIP18.1■□□□□ 0.491e-11■□□□□ 10.8
ATP2A2-204ENST00000539276 BRAPQ7Z569 592 aa18.1■□□□□ 0.49
ATP2A2-204ENST00000539276 ZCRB1Q8TBF4 217 aaKnown RBP18.1■□□□□ 0.49
ATP2A2-204ENST00000539276 SMARCE1Q969G3 411 aa18.1■□□□□ 0.49
ATP2A2-204ENST00000539276 IFT172Q9UG01 1749 aa18.1■□□□□ 0.49
ATP2A2-204ENST00000539276 GPAA1O43292 621 aa18.1■□□□□ 0.49
ATP2A2-204ENST00000539276 ERO1AQ96HE7 468 aa18.1■□□□□ 0.49
ATP2A2-204ENST00000539276 KIAA1468Q9P260 1216 aa18.1■□□□□ 0.49
ATP2A2-204ENST00000539276 IQSEC3Q9UPP2 1182 aaPredicted RBP18.1■□□□□ 0.49
ATP2A2-204ENST00000539276 CLIC4Q9Y696 253 aa18.1■□□□□ 0.49
ATP2A2-204ENST00000539276 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 FANCCQ00597 558 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 NOL10Q9BSC4 688 aaKnown RBP18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 DSCC1Q9BVC3 393 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 SPTLC3Q9NUV7 552 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 PREX1Q8TCU6 1659 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 ZAP70P43403 619 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 AFMP43652 599 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 PTPN21Q16825 1174 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 CCDC144BQ3MJ40 725 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 GJB4Q9NTQ9 266 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 PHKG2P15735 406 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 KIF4BQ2VIQ3 1234 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 MYSM1Q5VVJ2 828 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 ADALQ6DHV7 355 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 ZKSCAN3Q9BRR0 538 aa18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 PUS3Q9BZE2 481 aaKnown RBP18.09■□□□□ 0.49
ATP2A2-204ENST00000539276 AP5Z1O43299 807 aa18.08■□□□□ 0.49
ATP2A2-204ENST00000539276 DPCR1Q3MIW9 517 aa18.08■□□□□ 0.49
ATP2A2-204ENST00000539276 MRFAP1L1Q96HT8 127 aa18.08■□□□□ 0.49
ATP2A2-204ENST00000539276 CCDC12Q8WUD4 166 aaPredicted RBP18.08■□□□□ 0.48
ATP2A2-204ENST00000539276 RCOR1Q9UKL0 485 aa18.08■□□□□ 0.48
ATP2A2-204ENST00000539276 CEP170BQ9Y4F5 1589 aaPredicted RBP18.08■□□□□ 0.48
ATP2A2-204ENST00000539276 ADD1P35611 737 aaKnown RBP18.08■□□□□ 0.48
ATP2A2-204ENST00000539276 AXIN2Q9Y2T1 843 aa18.08■□□□□ 0.48
ATP2A2-204ENST00000539276 NRKQ7Z2Y5 1582 aa18.07■□□□□ 0.48
ATP2A2-204ENST00000539276 RANBP6O60518 1105 aaKnown RBP18.07■□□□□ 0.48
ATP2A2-204ENST00000539276 MYL5Q02045 173 aa18.07■□□□□ 0.48
ATP2A2-204ENST00000539276 KARSQ15046 597 aaKnown RBP18.07■□□□□ 0.48
ATP2A2-204ENST00000539276 MFSD6Q6ZSS7 791 aa18.07■□□□□ 0.48
ATP2A2-204ENST00000539276 ERCC6LQ2NKX8 1250 aa18.07■□□□□ 0.48
ATP2A2-204ENST00000539276 STX17P56962 302 aa18.07■□□□□ 0.48
ATP2A2-204ENST00000539276 MARCH6O60337 910 aa18.06■□□□□ 0.48
ATP2A2-204ENST00000539276 FGAP02671 866 aa18.06■□□□□ 0.48
ATP2A2-204ENST00000539276 APPBP2Q92624 585 aa18.06■□□□□ 0.48
ATP2A2-204ENST00000539276 ZNF274Q96GC6 653 aaPredicted RBP18.06■□□□□ 0.48
ATP2A2-204ENST00000539276 PFKFB1P16118 471 aa18.06■□□□□ 0.48
ATP2A2-204ENST00000539276 TTF1Q15361 905 aaPredicted RBP18.06■□□□□ 0.48
ATP2A2-204ENST00000539276 CAGE1Q8TC20 777 aa18.06■□□□□ 0.48
ATP2A2-204ENST00000539276 CEP131Q9UPN4 1083 aa18.06■□□□□ 0.48
ATP2A2-204ENST00000539276 CCDC196A0A1B0GTZ2 297 aa18.05■□□□□ 0.48
ATP2A2-204ENST00000539276 ANGEL1Q9UNK9 670 aaKnown RBP18.05■□□□□ 0.48
ATP2A2-204ENST00000539276 MAST3O60307 1309 aa18.05■□□□□ 0.48
ATP2A2-204ENST00000539276 KIF5CO60282 957 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 ADORA1P30542 326 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 KRT40Q6A162 431 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 PI16Q6UXB8 463 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 CLTCQ00610 1675 aaKnown RBP18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 NLRP12P59046 1061 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 NCBP1Q09161 790 aaKnown RBP18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 PNOCQ13519 176 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 WTAPQ15007 396 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 TXLNAP40222 546 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 RTN1Q16799 776 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 CCDC191Q8NCU4 936 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 DHX58Q96C10 678 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 CARD6Q9BX69 1037 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 GOLPH3LQ9H4A5 285 aa18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 USP42Q9H9J4 1324 aaKnown RBP18.04■□□□□ 0.48
ATP2A2-204ENST00000539276 SIGLEC1Q9BZZ2 1709 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms