RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 IRX1P78414 480 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 SARNPP82979 210 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 SETQ01105 290 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 SEMA3FQ13275 785 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 MTMR2Q13614 643 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 ARID5BQ14865 1188 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 BRD3Q15059 726 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 TTLL5Q6EMB2 1281 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 LRRC31Q6UY01 552 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 SND1Q7KZF4 910 aaKnown RBP eCLIP5.52□□□□□ -1.536e-6■□□□□ 9.2
SNRNP40-206ENST00000489853 C16orf71Q8IYS4 520 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 MICALL1Q8N3F8 863 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 LRRN4CLQ8ND94 238 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 GIMAP7Q8NHV1 300 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 STK32AQ8WU08 396 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 RABGGTAQ92696 567 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 MIEF2Q96C03 454 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 PPP1R13BQ96KQ4 1090 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 OSBPL5Q9H0X9 879 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 CLSTN2Q9H4D0 955 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 OSBPL3Q9H4L5 887 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 DNAI1Q9UI46 699 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 CARMIL2Q6F5E8 1435 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 GPATCH8Q9UKJ3 1502 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 TTC21BQ7Z4L5 1316 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 CCDC151A5D8V7 595 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 ANKRD33BA6NCL7 494 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 UNCXA6NJT0 531 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 TTC36A6NLP5 189 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 H3BQF6 201 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 NRDCO43847 1150 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 EIF3JO75822 258 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 ERLIN2O94905 339 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 U2AF1L5P0DN76 240 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 TMPOP42166 694 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 HSPA2P54652 639 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 EVCP57679 992 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 U2AF1Q01081 240 aaKnown RBP eCLIP5.52□□□□□ -1.535e-8■■□□□ 11.8
SNRNP40-206ENST00000489853 DNM1Q05193 864 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 DDR1Q08345 913 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 APOBRQ0VD83 1088 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 BIRC2Q13490 618 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 IQCB1Q15051 598 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 E4F1Q66K89 784 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 FOXR1Q6PIV2 292 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 HDXQ7Z353 690 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 FMNL3Q8IVF7 1028 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 RPAP2Q8IXW5 612 aaPredicted RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 HNRNPLLQ8WVV9 542 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 DDX11Q96FC9 970 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 CCDC34Q96HJ3 373 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 ESYT1Q9BSJ8 1104 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 SIGLEC1Q9BZZ2 1709 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 GNL3LQ9NVN8 582 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 STK26Q9P289 416 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 ARAP3Q8WWN8 1544 aa5.52□□□□□ -1.53
SNRNP40-206ENST00000489853 KIAA0556O60303 1618 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 RNF17Q9BXT8 1623 aaKnown RBP5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 C9orf84Q5VXU9 1444 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 SSH2Q76I76 1423 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 TMCO5BA8MYB1 307 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 MTHFSP49914 203 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 TUBB4BP68371 445 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 FUT2Q10981 343 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 CAMK4Q16566 473 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 LONRF2Q1L5Z9 754 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 NBPF6Q5VWK0 638 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 RSRC2Q7L4I2 434 aaKnown RBP5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 NBPF5PQ86XG9 351 aaPredicted RBP5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 ANKRD44Q8N8A2 993 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 CCDC150Q8NCX0 1101 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 HELBQ8NG08 1087 aaPredicted RBP5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 ITFG2Q969R8 447 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 NBPF4Q96M43 638 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 FAM210AQ96ND0 272 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 PARD6BQ9BYG5 372 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 TERF2IPQ9NYB0 399 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 VPS18Q9P253 973 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 SEPT9Q9UHD8 586 aaPredicted RBP5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 TRAK1Q9UPV9 953 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 SMC3Q9UQE7 1217 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 MYOM1P52179 1685 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 ZNF518AQ6AHZ1 1483 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 ABCC4O15439 1325 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 ABCA8O94911 1581 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 IQGAP1P46940 1657 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 FAM135BQ49AJ0 1406 aa5.51□□□□□ -1.53
SNRNP40-206ENST00000489853 GOLGA6L4A6NEF3 574 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 CLSTN1O94985 981 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 KRT85P78386 507 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 NEDD9Q14511 834 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 GBP6Q6ZN66 633 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 NOL8Q76FK4 1167 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 HOMER1Q86YM7 354 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 CKAP2LQ8IYA6 745 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 PRAM1Q96QH2 718 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 PLEKHF1Q96S99 279 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 MPHOSPH8Q99549 860 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms