RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 PDE6AP16499 860 aa14.18□□□□□ -0.14
PKP4-213ENST00000486254 GJB2P29033 226 aa14.18□□□□□ -0.14
PKP4-213ENST00000486254 FAM196AQ6ZSG2 479 aa14.18□□□□□ -0.14
PKP4-213ENST00000486254 RGS22Q8NE09 1264 aa14.18□□□□□ -0.14
PKP4-213ENST00000486254 PIH1D3Q9NQM4 214 aaKnown RBP14.18□□□□□ -0.14
PKP4-213ENST00000486254 DDX49Q9Y6V7 483 aaKnown RBP14.18□□□□□ -0.14
PKP4-213ENST00000486254 PFKFB2O60825 505 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 SLC9C2Q5TAH2 1124 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 PI16Q6UXB8 463 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 NLRP3Q96P20 1036 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 PUS7LQ9H0K6 701 aaKnown RBP14.17□□□□□ -0.14
PKP4-213ENST00000486254 GNL3LQ9NVN8 582 aaKnown RBP14.17□□□□□ -0.14
PKP4-213ENST00000486254 COL4A1P02462 1669 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 PNPLA7Q6ZV29 1317 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 GOLGA6L3A6NEY3 463 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 F13A1P00488 732 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 FGAP02671 866 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 GNAT2P19087 354 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 CSPP1Q1MSJ5 1256 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 NBPF5PQ86XG9 351 aaPredicted RBP14.17□□□□□ -0.14
PKP4-213ENST00000486254 ARHGEF1Q92888 912 aaKnown RBP14.17□□□□□ -0.14
PKP4-213ENST00000486254 ZNF274Q96GC6 653 aaPredicted RBP14.17□□□□□ -0.14
PKP4-213ENST00000486254 ANKRD2Q9GZV1 360 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 MTMR6Q9Y217 621 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 KIF3AQ9Y496 699 aa14.17□□□□□ -0.14
PKP4-213ENST00000486254 BRWD3Q6RI45 1802 aa14.16□□□□□ -0.14
PKP4-213ENST00000486254 ZNF445P59923 1031 aa14.16□□□□□ -0.14
PKP4-213ENST00000486254 TRAPPC3LQ5T215 181 aa14.16□□□□□ -0.14
PKP4-213ENST00000486254 Q6ZUG5 572 aa14.16□□□□□ -0.14
PKP4-213ENST00000486254 ZNF532Q9HCE3 1301 aa14.15□□□□□ -0.14
PKP4-213ENST00000486254 MAST2Q6P0Q8 1798 aa14.15□□□□□ -0.14
PKP4-213ENST00000486254 KIAA1551Q9HCM1 1747 aa14.15□□□□□ -0.14
PKP4-213ENST00000486254 FAM177BA6PVY3 158 aa14.15□□□□□ -0.14
PKP4-213ENST00000486254 IDH1O75874 414 aaKnown RBP14.15□□□□□ -0.14
PKP4-213ENST00000486254 GTF2E1P29083 439 aaPredicted RBP14.15□□□□□ -0.14
PKP4-213ENST00000486254 MRE11P49959 708 aa14.15□□□□□ -0.14
PKP4-213ENST00000486254 HMGN5P82970 282 aaKnown RBP14.15□□□□□ -0.14
PKP4-213ENST00000486254 HELBQ8NG08 1087 aaPredicted RBP14.15□□□□□ -0.14
PKP4-213ENST00000486254 SMARCC2Q8TAQ2 1214 aa14.15□□□□□ -0.14
PKP4-213ENST00000486254 MINPP1Q9UNW1 487 aa14.15□□□□□ -0.14
PKP4-213ENST00000486254 TCHHQ07283 1943 aa14.15□□□□□ -0.14
PKP4-213ENST00000486254 DUOX1Q9NRD9 1551 aa14.15□□□□□ -0.14
PKP4-213ENST00000486254 TNRC6CQ9HCJ0 1690 aaKnown RBP14.15□□□□□ -0.14
PKP4-213ENST00000486254 CHD4Q14839 1912 aa14.14□□□□□ -0.15
PKP4-213ENST00000486254 MYH13Q9UKX3 1938 aa14.14□□□□□ -0.15
PKP4-213ENST00000486254 MCM5P33992 734 aa14.14□□□□□ -0.15
PKP4-213ENST00000486254 RFC4P35249 363 aa14.14□□□□□ -0.15
PKP4-213ENST00000486254 RPS8P62241 208 aaKnown RBP14.14□□□□□ -0.15
PKP4-213ENST00000486254 COL9A3Q14050 684 aaPredicted RBP14.14□□□□□ -0.15
PKP4-213ENST00000486254 SLFNL1Q499Z3 407 aa14.14□□□□□ -0.15
PKP4-213ENST00000486254 C3orf67Q6ZVT6 689 aa14.14□□□□□ -0.15
PKP4-213ENST00000486254 MB21D2Q8IYB1 491 aaPredicted RBP14.14□□□□□ -0.15
PKP4-213ENST00000486254 NCOA7Q8NI08 942 aa14.14□□□□□ -0.15
PKP4-213ENST00000486254 STRBPQ96SI9 672 aaKnown RBP14.14□□□□□ -0.15
PKP4-213ENST00000486254 MTA3Q9BTC8 594 aa14.14□□□□□ -0.15
PKP4-213ENST00000486254 QTRT2Q9H974 415 aaKnown RBP14.14□□□□□ -0.15
PKP4-213ENST00000486254 SRP68Q9UHB9 627 aaKnown RBP14.14□□□□□ -0.15
PKP4-213ENST00000486254 ZNF213O14771 459 aa14.13□□□□□ -0.15
PKP4-213ENST00000486254 PRPF40AO75400 957 aaKnown RBP14.13□□□□□ -0.15
PKP4-213ENST00000486254 CAVIN4Q5BKX8 364 aa14.13□□□□□ -0.15
PKP4-213ENST00000486254 BRF1Q92994 677 aa14.13□□□□□ -0.15
PKP4-213ENST00000486254 AIDAQ96BJ3 306 aa14.13□□□□□ -0.15
PKP4-213ENST00000486254 WWC3Q9ULE0 1092 aa14.13□□□□□ -0.15
PKP4-213ENST00000486254 DENND2AQ9ULE3 1009 aa14.13□□□□□ -0.15
PKP4-213ENST00000486254 CACNA1SQ13698 1873 aa14.13□□□□□ -0.15
PKP4-213ENST00000486254 SALL1Q9NSC2 1324 aa14.13□□□□□ -0.15
PKP4-213ENST00000486254 RGPD3A6NKT7 1758 aaPredicted RBP14.13□□□□□ -0.15
PKP4-213ENST00000486254 RGPD4Q7Z3J3 1758 aa14.13□□□□□ -0.15
PKP4-213ENST00000486254 KCNQ4P56696 695 aa14.13□□□□□ -0.15
PKP4-213ENST00000486254 FBXO33Q7Z6M2 555 aa14.13□□□□□ -0.15
PKP4-213ENST00000486254 NECAB1Q8N987 351 aa14.13□□□□□ -0.15
PKP4-213ENST00000486254 SYAP1Q96A49 352 aaPredicted RBP14.13□□□□□ -0.15
PKP4-213ENST00000486254 TAF1P21675 1872 aa14.12□□□□□ -0.15
PKP4-213ENST00000486254 BCAMP50895 628 aa14.12□□□□□ -0.15
PKP4-213ENST00000486254 FGD1P98174 961 aa14.12□□□□□ -0.15
PKP4-213ENST00000486254 LARP1BQ659C4 914 aaKnown RBP14.12□□□□□ -0.15
PKP4-213ENST00000486254 TTLL5Q6EMB2 1281 aa14.12□□□□□ -0.15
PKP4-213ENST00000486254 KRT27Q7Z3Y8 459 aa14.12□□□□□ -0.15
PKP4-213ENST00000486254 RALYLQ86SE5 291 aaKnown RBP14.12□□□□□ -0.15
PKP4-213ENST00000486254 CELF1Q92879 486 aaKnown RBP14.12□□□□□ -0.15
PKP4-213ENST00000486254 TCEANC2Q96MN5 208 aa14.12□□□□□ -0.15
PKP4-213ENST00000486254 LARP6Q9BRS8 491 aaKnown RBP14.12□□□□□ -0.15
PKP4-213ENST00000486254 ELP1O95163 1332 aa14.12□□□□□ -0.15
PKP4-213ENST00000486254 PATL2C9JE40 543 aaKnown RBP14.11□□□□□ -0.15
PKP4-213ENST00000486254 DHX16O60231 1041 aaKnown RBP14.11□□□□□ -0.15
PKP4-213ENST00000486254 TM4SF1P30408 202 aa14.11□□□□□ -0.15
PKP4-213ENST00000486254 NAA16Q6N069 864 aaPredicted RBP14.11□□□□□ -0.15
PKP4-213ENST00000486254 C15orf52Q6ZUT6 534 aaKnown RBP14.11□□□□□ -0.15
PKP4-213ENST00000486254 GPT2Q8TD30 523 aa14.11□□□□□ -0.15
PKP4-213ENST00000486254 GZF1Q9H116 711 aaPredicted RBP14.11□□□□□ -0.15
PKP4-213ENST00000486254 LRRC4BQ9NT99 713 aa14.11□□□□□ -0.15
PKP4-213ENST00000486254 COL1A1P02452 1464 aaPredicted RBP14.11□□□□□ -0.15
PKP4-213ENST00000486254 NCLP19338 710 aaKnown RBP14.1□□□□□ -0.15
PKP4-213ENST00000486254 UBE2HP62256 183 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 SCRN1Q12765 414 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 TRDNQ13061 729 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 NFIXQ14938 502 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 CRY2Q49AN0 593 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 BICDL1Q6ZP65 573 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 AMIGO3Q86WK7 504 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms