RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
HCG27-202ENST00000414008 PARP3Q9Y6F1 533 aa12.39□□□□□ -0.43
HCG27-202ENST00000414008 FANCIQ9NVI1 1328 aa12.38□□□□□ -0.43
HCG27-202ENST00000414008 NFIXQ14938 502 aa12.38□□□□□ -0.43
HCG27-202ENST00000414008 PROSER3Q2NL68 480 aa12.38□□□□□ -0.43
HCG27-202ENST00000414008 TRAF7Q6Q0C0 670 aa12.38□□□□□ -0.43
HCG27-202ENST00000414008 CLEC4GQ6UXB4 293 aa12.38□□□□□ -0.43
HCG27-202ENST00000414008 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
HCG27-202ENST00000414008 EPS8L1Q8TE68 723 aa12.38□□□□□ -0.43
HCG27-202ENST00000414008 SYT17Q9BSW7 474 aa12.38□□□□□ -0.43
HCG27-202ENST00000414008 CHPF2Q9P2E5 772 aa12.38□□□□□ -0.43
HCG27-202ENST00000414008 DBF4Q9UBU7 674 aaPredicted RBP12.38□□□□□ -0.43
HCG27-202ENST00000414008 ANXA1P04083 346 aa12.37□□□□□ -0.43
HCG27-202ENST00000414008 DDR1Q08345 913 aa12.37□□□□□ -0.43
HCG27-202ENST00000414008 TWISTNBQ3B726 338 aaPredicted RBP12.37□□□□□ -0.43
HCG27-202ENST00000414008 TBC1D9BQ66K14 1250 aa12.37□□□□□ -0.43
HCG27-202ENST00000414008 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
HCG27-202ENST00000414008 BICDL1Q6ZP65 573 aa12.37□□□□□ -0.43
HCG27-202ENST00000414008 TTLL7Q6ZT98 887 aa12.37□□□□□ -0.43
HCG27-202ENST00000414008 LRP10Q7Z4F1 713 aa12.37□□□□□ -0.43
HCG27-202ENST00000414008 ZNF652Q9Y2D9 606 aa12.37□□□□□ -0.43
HCG27-202ENST00000414008 C4AP0C0L4 1744 aa12.37□□□□□ -0.43
HCG27-202ENST00000414008 COL24A1Q17RW2 1714 aa12.37□□□□□ -0.43
HCG27-202ENST00000414008 LAMB4A4D0S4 1761 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 MAGEB6P1A0A0J9YX57 407 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 ERVV-1B6SEH8 477 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 J3QL48 77 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 POLRMTO00411 1230 aaKnown RBP12.36□□□□□ -0.43
HCG27-202ENST00000414008 EXOSC9Q06265 439 aaKnown RBP12.36□□□□□ -0.43
HCG27-202ENST00000414008 AIMP1Q12904 312 aaKnown RBP12.36□□□□□ -0.43
HCG27-202ENST00000414008 CCDC30Q5VVM6 783 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 COPS6Q7L5N1 327 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 SH3BP5LQ7L8J4 393 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 SH3RF1Q7Z6J0 888 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 MPNDQ8N594 471 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 HYPKQ9NX55 129 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 CD2APQ9Y5K6 639 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 WASF2Q9Y6W5 498 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 MAP3K15Q6ZN16 1313 aa12.36□□□□□ -0.43
HCG27-202ENST00000414008 E9PSI1 815 aa12.35□□□□□ -0.43
HCG27-202ENST00000414008 SERPINB2P05120 415 aa12.35□□□□□ -0.43
HCG27-202ENST00000414008 SMPD1P17405 629 aa12.35□□□□□ -0.43
HCG27-202ENST00000414008 PTK2Q05397 1052 aa12.35□□□□□ -0.43
HCG27-202ENST00000414008 HLFQ16534 295 aa12.35□□□□□ -0.43
HCG27-202ENST00000414008 XAGE3Q8WTP9 111 aa12.35□□□□□ -0.43
HCG27-202ENST00000414008 SETDB2Q96T68 719 aa12.35□□□□□ -0.43
HCG27-202ENST00000414008 ARHGAP9Q9BRR9 750 aa12.35□□□□□ -0.43
HCG27-202ENST00000414008 TRIM34Q9BYJ4 488 aa12.35□□□□□ -0.43
HCG27-202ENST00000414008 VAMP4O75379 141 aa12.34□□□□□ -0.43
HCG27-202ENST00000414008 SLFN5Q08AF3 891 aa12.34□□□□□ -0.43
HCG27-202ENST00000414008 C4orf48Q5BLP8 95 aa12.34□□□□□ -0.43
HCG27-202ENST00000414008 GPSM3Q9Y4H4 160 aa12.34□□□□□ -0.43
HCG27-202ENST00000414008 HNRNPUQ00839 825 aaKnown RBP eCLIP12.33□□□□□ -0.44
HCG27-202ENST00000414008 ZBTB33Q86T24 672 aa12.33□□□□□ -0.44
HCG27-202ENST00000414008 NLGN2Q8NFZ4 835 aa12.33□□□□□ -0.44
HCG27-202ENST00000414008 STK31Q9BXU1 1019 aa12.33□□□□□ -0.44
HCG27-202ENST00000414008 NIP7Q9Y221 180 aaKnown RBP eCLIP12.33□□□□□ -0.44
HCG27-202ENST00000414008 TLL2Q9Y6L7 1015 aa12.33□□□□□ -0.44
HCG27-202ENST00000414008 TCERG1O14776 1098 aaKnown RBP12.32□□□□□ -0.44
HCG27-202ENST00000414008 ARID5BQ14865 1188 aa12.32□□□□□ -0.44
HCG27-202ENST00000414008 MTMR14Q8NCE2 650 aa12.32□□□□□ -0.44
HCG27-202ENST00000414008 PHAXQ9H814 394 aaKnown RBP12.32□□□□□ -0.44
HCG27-202ENST00000414008 PRM3Q9NNZ6 103 aa12.32□□□□□ -0.44
HCG27-202ENST00000414008 SNRKQ9NRH2 765 aa12.32□□□□□ -0.44
HCG27-202ENST00000414008 CARMIL3Q8ND23 1372 aa12.31□□□□□ -0.44
HCG27-202ENST00000414008 NPHP1O15259 732 aa12.31□□□□□ -0.44
HCG27-202ENST00000414008 AVPP01185 164 aa12.31□□□□□ -0.44
HCG27-202ENST00000414008 TGFB2P61812 414 aa12.31□□□□□ -0.44
HCG27-202ENST00000414008 PLBD2Q8NHP8 589 aa12.31□□□□□ -0.44
HCG27-202ENST00000414008 SCN7AQ01118 1682 aa12.3□□□□□ -0.44
HCG27-202ENST00000414008 GPTP24298 496 aa12.3□□□□□ -0.44
HCG27-202ENST00000414008 HSP90AB3PQ58FF7 597 aa12.3□□□□□ -0.44
HCG27-202ENST00000414008 PRR5LQ6MZQ0 368 aa12.3□□□□□ -0.44
HCG27-202ENST00000414008 TPTE2Q6XPS3 522 aa12.3□□□□□ -0.44
HCG27-202ENST00000414008 NBPF5PQ86XG9 351 aaPredicted RBP12.3□□□□□ -0.44
HCG27-202ENST00000414008 ZNF34Q8IZ26 560 aa12.3□□□□□ -0.44
HCG27-202ENST00000414008 TRMT2AQ8IZ69 625 aaKnown RBP12.3□□□□□ -0.44
HCG27-202ENST00000414008 CDK15Q96Q40 435 aa12.3□□□□□ -0.44
HCG27-202ENST00000414008 C1QTNF2Q9BXJ5 285 aa12.3□□□□□ -0.44
HCG27-202ENST00000414008 NDUFB9Q9Y6M9 179 aa12.3□□□□□ -0.44
HCG27-202ENST00000414008 C10orf71Q711Q0 1435 aa12.29□□□□□ -0.44
HCG27-202ENST00000414008 FAM177BA6PVY3 158 aa12.29□□□□□ -0.44
HCG27-202ENST00000414008 DDX58O95786 925 aaKnown RBP12.29□□□□□ -0.44
HCG27-202ENST00000414008 TCIRG1Q13488 830 aa12.29□□□□□ -0.44
HCG27-202ENST00000414008 CTC1Q2NKJ3 1217 aa12.29□□□□□ -0.44
HCG27-202ENST00000414008 CNBD1Q8NA66 436 aa12.29□□□□□ -0.44
HCG27-202ENST00000414008 ATP10DQ9P241 1426 aa12.28□□□□□ -0.44
HCG27-202ENST00000414008 A0A0G2JLW4 131 aa12.28□□□□□ -0.44
HCG27-202ENST00000414008 DPEP1P16444 411 aa12.28□□□□□ -0.44
HCG27-202ENST00000414008 GTF2E1P29083 439 aaPredicted RBP12.28□□□□□ -0.44
HCG27-202ENST00000414008 ST5P78524 1137 aa12.28□□□□□ -0.44
HCG27-202ENST00000414008 ERFEQ4G0M1 354 aa12.28□□□□□ -0.44
HCG27-202ENST00000414008 PARP10Q53GL7 1025 aa12.28□□□□□ -0.44
HCG27-202ENST00000414008 SUSD4Q5VX71 490 aa12.28□□□□□ -0.44
HCG27-202ENST00000414008 TRMT44Q8IYL2 757 aaKnown RBP12.28□□□□□ -0.44
HCG27-202ENST00000414008 BRIP1Q9BX63 1249 aa12.28□□□□□ -0.44
HCG27-202ENST00000414008 NYXQ9GZU5 481 aa12.28□□□□□ -0.44
HCG27-202ENST00000414008 BCORQ6W2J9 1755 aa12.28□□□□□ -0.44
HCG27-202ENST00000414008 ADH1CP00326 375 aa12.27□□□□□ -0.45
HCG27-202ENST00000414008 GPR162Q16538 588 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms