RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 NCBP1Q09161 790 aaKnown RBP13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 PIK3C2GO75747 1445 aa13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 MRPL50Q8N5N7 158 aaKnown RBP13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 PARP3Q9Y6F1 533 aa13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 NSRP1Q9H0G5 558 aaKnown RBP13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 STMN4Q9H169 189 aaPredicted RBP13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 TOM1O60784 492 aa13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 GNA11P29992 359 aa13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 ATP8B2P98198 1209 aa13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 LDHBP07195 334 aaKnown RBP13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 OTUD6BQ8N6M0 293 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 ZSWIM4Q9H7M6 989 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 C6orf163Q5TEZ5 329 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 MSANTD4Q8NCY6 345 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 PPM1EQ8WY54 764 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 MCM9Q9NXL9 1143 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 CALCOCO1Q9P1Z2 691 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 FBLN1P23142 703 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 SKILP12757 684 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 SYT1P21579 422 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 VTI1AQ96AJ9 217 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 BRAPQ7Z569 592 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 LINS1Q8NG48 757 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 SPTLC2O15270 562 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 MYH9P35579 1960 aaKnown RBP13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 USP48Q86UV5 1035 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 COL17A1Q9UMD9 1497 aaPredicted RBP13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 TACC1O75410 805 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 POLD1P28340 1107 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 ARID5AQ03989 594 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 LMBR1LQ6UX01 489 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 CEP83Q9Y592 693 aa13.94□□□□□ -0.18
KCNQ3-201ENST00000388996 IGHDP01880 384 aa13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 TCOF1Q13428 1488 aaKnown RBP13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 A0A1W2PP64 1363 aa13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 LMBR1Q8WVP7 490 aa13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 F13A1P00488 732 aa13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 DYNC1I1O14576 645 aa13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 RP1L1Q8IWN7 2480 aaPredicted RBP13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 PARP1P09874 1014 aaKnown RBP13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 TYRO3Q06418 890 aa13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 HSP90AA4PQ58FG1 418 aa13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 LRSAM1Q6UWE0 723 aa13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 AOPEPQ8N6M6 819 aa13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 RTCBQ9Y3I0 505 aaKnown RBP13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 NEK11Q8NG66 645 aa13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 PRIMPOLQ96LW4 560 aa13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 EYA3Q99504 573 aa13.93□□□□□ -0.18
KCNQ3-201ENST00000388996 DZIP3Q86Y13 1208 aaKnown RBP13.92□□□□□ -0.18
KCNQ3-201ENST00000388996 ANKS4BQ8N8V4 417 aa13.92□□□□□ -0.18
KCNQ3-201ENST00000388996 TPTE2Q6XPS3 522 aa13.92□□□□□ -0.18
KCNQ3-201ENST00000388996 CNBD1Q8NA66 436 aa13.92□□□□□ -0.18
KCNQ3-201ENST00000388996 DCAF5Q96JK2 942 aa13.92□□□□□ -0.18
KCNQ3-201ENST00000388996 JDP2Q8WYK2 163 aa13.92□□□□□ -0.18
KCNQ3-201ENST00000388996 ZNF354CQ86Y25 554 aa13.92□□□□□ -0.18
KCNQ3-201ENST00000388996 CHD1O14646 1710 aa13.92□□□□□ -0.18
KCNQ3-201ENST00000388996 UBXN1Q04323 297 aa13.92□□□□□ -0.18
KCNQ3-201ENST00000388996 CCDC77Q9BR77 488 aa13.92□□□□□ -0.18
KCNQ3-201ENST00000388996 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
KCNQ3-201ENST00000388996 ATP2A1O14983 1001 aa13.92□□□□□ -0.18
KCNQ3-201ENST00000388996 PTGS1P23219 599 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 PRDM10Q9NQV6 1147 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 IRS4O14654 1257 aaPredicted RBP13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 C8orf58Q8NAV2 365 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 RBM28Q9NW13 759 aaKnown RBP13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 LMOD1P29536 600 aaPredicted RBP13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 CBX1P83916 185 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 GSTA5Q7RTV2 222 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 NFATC2IPQ8NCF5 419 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 RGS22Q8NE09 1264 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 SPATA24Q86W54 205 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 GTF2F1P35269 517 aaKnown RBP eCLIP13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 GJC1P36383 396 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 KRT79Q5XKE5 535 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 CCDC50Q8IVM0 306 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 DHX58Q96C10 678 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 GNPATO15228 680 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 BICC1Q9H694 974 aaKnown RBP13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 ARFGAP3Q9NP61 516 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 RP1P56715 2156 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 CTAGE15A4D2H0 777 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 CTAGE8P0CG41 777 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 DNM1Q05193 864 aaKnown RBP13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 CTAGE6Q86UF2 777 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 CTAGE4Q8IX94 777 aa13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 RBM17Q96I25 401 aaKnown RBP13.91□□□□□ -0.18
KCNQ3-201ENST00000388996 ARL1P40616 181 aaPredicted RBP13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 HS2ST1Q7LGA3 356 aa13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 ZNF318Q5VUA4 2279 aa13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 RAD50Q92878 1312 aa13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 TFCP2Q12800 502 aa13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 MCM7P33993 719 aa13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 TFCP2L1Q9NZI6 479 aa13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 TMEM110-MUSTN1A8MSY1 372 aa13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 CREB3L3Q68CJ9 461 aa13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 MIGA1Q8NAN2 632 aa13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 PAIP2Q9BPZ3 127 aaKnown RBP13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 TCHPQ9BT92 498 aa13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 PA2G4Q9UQ80 394 aaKnown RBP13.9□□□□□ -0.18
KCNQ3-201ENST00000388996 PCDHB15Q9Y5E8 787 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms