RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 Rtel1Q0VGM9 1203 aa14.88□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Rassf4Q8CB96 322 aa14.88□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Cyp2c23E9Q5K4 494 aa14.87□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Nyap1Q6PFX7 833 aa14.87□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Syt1P46096 421 aa14.87□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Ice2Q3UZ18 988 aaKnown RBP14.87□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Sp8Q8BMJ8 486 aa14.87□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Kiaa0319lQ8K135 1048 aa14.87□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Ppp4r3bQ922R5 820 aa14.87□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Ttc14Q9CSP9 761 aa14.87□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Vps33aQ9D2N9 598 aa14.87□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Rai14Q9EP71 979 aaKnown RBP14.87□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Mapk8ip1Q9WVI9 707 aa14.87□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Gm11983V9GXS8 105 aa14.87□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 4930523C07RikE9Q2T4 99 aa14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Pde8bE9Q4S1 865 aa14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 F2rP30558 430 aa14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Plbd2Q3TCN2 594 aa14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Fam160b2Q80YR2 744 aa14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Spata32Q8C5V0 334 aa14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Lrrfip2Q91WK0 415 aa14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Gm13023A2A8N2 498 aa14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Snrpa1P57784 255 aaKnown RBP14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Pkp1P97350 728 aaKnown RBP14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Rtkn2Q14B46 604 aa14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Kmt5bQ3U8K7 883 aa14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Ift57Q8BXG3 429 aa14.86□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Cspp1B2RX88 1205 aa14.85□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Ppfibp2O35711 882 aa14.85□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Ms4a1P19437 291 aa14.85□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Zc3h12cQ5DTV4 884 aa14.85□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Afg3l2Q8JZQ2 802 aaKnown RBP14.85□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Plekho1Q9JIY0 408 aa14.85□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Dpf1Q9QX66 387 aa14.85□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Plekhf1Q3TB82 279 aa14.85□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Rps6kb1Q8BSK8 525 aa14.85□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Taok3Q8BYC6 898 aa14.85□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Rbm17Q8JZX4 405 aaKnown RBP14.85□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Ifi35Q9D8C4 286 aa14.85□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Sept1P42209 366 aa14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Pcmtd1P59913 357 aa14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Lrrc43Q3V0L5 667 aa14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Usp44Q8C2S0 711 aa14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Lmbrd2Q8C561 694 aa14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Scn11aQ9R053 1765 aa14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Q8BT18 775 aa14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Fam53cQ8BXQ8 393 aa14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Mrpl50Q8VDT9 159 aaKnown RBP14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Riok1Q922Q2 567 aa14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Atp1b3P97370 278 aa14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Anp32eP97822 260 aaKnown RBP14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Nlrp9aQ66X03 949 aa14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Lrit1Q8K099 624 aa14.84□□□□□ -0.03
Prpf40a-206ENSMUST00000209364 Fbxl16A2RT62 479 aa14.83□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Npy5rO70342 466 aa14.83□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Sptlc3Q8BG54 563 aa14.83□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Otud6bQ8K2H2 294 aa14.83□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Tceanc2Q8R2M0 207 aa14.83□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Zcrb1Q9CZ96 217 aaKnown RBP14.83□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Sh3bp5Q9Z131 463 aa14.83□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Znfx1Q8R151 1909 aaKnown RBP14.83□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Map10Q8BJS7 891 aa14.83□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 IncenpQ9WU62 880 aa14.83□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Setdb1O88974 1307 aa14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Cfap73J3QPZ5 306 aa14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Psen1P49769 467 aa14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Hspd1P63038 573 aaKnown RBP14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Ptcd1Q8C2E4 695 aaKnown RBP14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Nop14Q8R3N1 860 aaKnown RBP14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Stox1B2RQL2 990 aa14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Prl7a2O54831 253 aa14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Prl3d1P18121 224 aa14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Cdk4P30285 303 aa14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Cpa2Q504N0 417 aa14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 AidaQ8C4Q6 305 aa14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Smc3Q9CW03 1217 aaKnown RBP14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Ube3bQ9ES34 1070 aa14.82□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Arhgap33Q80YF9 1305 aa14.81□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Zkscan4Q5SZT6 480 aa14.81□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Gimap8Q75N62 688 aa14.81□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Chaf1aQ9QWF0 911 aa14.81□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Zfp804bA0A0G2JGH6 1343 aa14.81□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 CoblQ5NBX1 1337 aaKnown RBP14.81□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Irgm2A0A140LIF8 407 aa14.81□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 CltaO08585 235 aa14.81□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Trim56Q80VI1 734 aaKnown RBP14.81□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Rassf8Q8CJ96 419 aa14.81□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Creld2Q9CYA0 350 aa14.81□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 EcsitQ9QZH6 435 aa14.81□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Speer4dL7N216 212 aa14.8□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 VeztQ3ZK22 780 aa14.8□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Il17raQ60943 864 aa14.8□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Ctr9Q62018 1173 aaKnown RBP14.8□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Rbm33Q9CXK9 1231 aaKnown RBP14.8□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Myh3P13541 1940 aa14.8□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Gm4340L7N2C4 268 aa14.8□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 MycbpQ9EQS3 103 aa14.8□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Duox1A2AQ92 1551 aa14.8□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 Brpf3B2KF05 1204 aaKnown RBP14.79□□□□□ -0.04
Prpf40a-206ENSMUST00000209364 HmcesQ8R1M0 353 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms