RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 EregQ61521 162 aa10.64□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Eif2b4Q61749 524 aa10.64□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Esco1Q69Z69 843 aa10.64□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Pip4k2bQ80XI4 416 aa10.64□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Sv2bQ8BG39 683 aa10.64□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Ttc12Q8BW49 704 aa10.64□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 OsgepQ8BWU5 335 aa10.64□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Glis1Q8K1M4 789 aa10.64□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Q9CYS6 286 aa10.64□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Cdip1Q9DB75 208 aa10.64□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 TroapB7ZNG4 668 aa10.63□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Gpr165Q3V3A3 455 aa10.63□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 NfkbibQ60778 359 aa10.63□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 HhipQ7TN16 700 aa10.63□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Rapgef3Q8VCC8 918 aa10.63□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Vmn1r47Q9EQ51 310 aa10.63□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Kcnq5Q9JK45 933 aa10.63□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Stk11Q9WTK7 436 aa10.63□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Prrt2E9PUL5 346 aa10.62□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Wdr66E9Q743 1299 aa10.62□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Map4k2Q61161 821 aa10.62□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 DmknQ6P253 517 aa10.62□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Bsdc1Q80Y55 427 aa10.62□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Srek1Q8BZX4 494 aaKnown RBP10.62□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Cdca7lQ922M5 438 aa10.62□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 MeiobQ9D513 470 aa10.62□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Cbx8Q9QXV1 362 aa10.62□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Mpp2Q9WV34 552 aa10.62□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Faap100A2ACJ2 879 aa10.61□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Gm7361D3Z6R1 267 aa10.61□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Ccdc74aE9Q9U8 364 aa10.61□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Irx3P81067 507 aa10.61□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Aplp2Q06335 707 aa10.61□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Col19a1Q0VF58 1136 aa10.61□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Q3USZ8 430 aa10.61□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Trim75Q3UWZ0 467 aa10.61□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Zkscan4Q5SZT6 480 aa10.61□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Emilin1Q99K41 1017 aa10.61□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Crocc2F6XLV1 1638 aa10.6□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Gm8765B7ZWJ3 1017 aa10.6□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Gm906Q3V0M1 1017 aa10.6□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Dalrd3Q6PJN8 538 aa10.6□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Fbxo18Q8K2I9 1042 aa10.6□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Prkag2Q91WG5 566 aa10.6□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Ap3b2Q9JME5 1082 aa10.6□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Fmn1Q05860 1466 aa10.6□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Dnaja1P63037 397 aaKnown RBP10.59□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Ttbk2Q3UVR3 1243 aa10.59□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Ppp1r1bQ60829 194 aa10.59□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Zfp91Q62511 572 aa10.59□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Lrrc14Q8VC16 493 aa10.59□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 MthfrQ9WU20 654 aa10.59□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 Cngb1E1AZ71 1325 aa10.58□□□□□ -0.71
Ccdc54-201ENSMUST00000062439 SvopQ8BFT9 548 aa10.58□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Clec2hQ8C1T8 218 aa10.58□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Tmem79Q9D709 391 aa10.58□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Urb2E9Q7L1 1524 aaKnown RBP10.58□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Dhx29Q6PGC1 1365 aaKnown RBP10.57□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Gpatch11Q3UFS4 262 aa10.57□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Zc3h12cQ5DTV4 884 aa10.57□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Map3k12Q60700 888 aa10.57□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Tmem132eQ6IEE6 982 aa10.57□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Prr5Q812A5 387 aa10.57□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Phf20Q8BLG0 1010 aaKnown RBP10.57□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Bend7Q8BSV3 434 aa10.57□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 BcamQ9R069 622 aa10.57□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Gm5580A0A0N4SVP8 411 aa10.56□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Znf652Q5DU09 608 aa10.56□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Pou4f3Q63955 338 aa10.56□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 GancQ8BVW0 898 aa10.56□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Psrc1Q9D0P7 329 aa10.56□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Mrpl14Q9D1I6 145 aa10.56□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Hic2Q9JLZ6 619 aaKnown RBP10.56□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 PolkQ9QUG2 852 aa10.56□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 LrpprcQ6PB66 1392 aaKnown RBP10.55□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Gm13030A2APQ6 143 aa10.55□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Rsbn1lD3Z0K6 821 aa10.55□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Ccdc85cE9Q6B2 420 aa10.55□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Akap2O54931 893 aa10.55□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Suz12Q80U70 741 aaKnown RBP10.55□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 SharpinQ91WA6 380 aa10.55□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Igf1rQ60751 1373 aa10.54□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Rnf19bA2A7Q9 732 aa10.54□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Gpr3P35413 330 aa10.54□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 SnrpnP63163 240 aaKnown RBP10.54□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Pcdh19Q80TF3 1145 aa10.54□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Ces2aQ8QZR3 558 aa10.54□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Plb1Q3TTY0 1478 aa10.54□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Mroh3A0A1D5RM54 893 aa10.53□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 1700015F17RikD3YUK8 150 aa10.53□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Gm11239E9Q5Z9 360 aa10.53□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Slc2a7P0C6A1 513 aa10.53□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Gm428Q3UTE2 360 aa10.53□□□□□ -0.72
Ccdc54-201ENSMUST00000062439 Ier5O89113 308 aa10.52□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Q66JV7 365 aa10.52□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Efr3bQ6ZQ18 817 aa10.52□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Ireb2Q811J3 963 aaKnown RBP10.52□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Mrgprb3Q91ZC1 312 aa10.52□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 LsrQ99KG5 594 aa10.52□□□□□ -0.73
Ccdc54-201ENSMUST00000062439 Mzb1Q9D8I1 188 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms