RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Arhgef5E9Q7D5 1581 aa11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Gm15262A0A140LIQ5 728 aa11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Pdzrn4E9PUZ9 1014 aa11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Mum1l1Q4VA55 681 aa11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Znf568E9PYI1 671 aa11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 PhexP70669 749 aa11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Satb1Q60611 764 aa11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Wdr44Q6NVE8 915 aa11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 ErmapQ9JLN5 566 aa11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Cep85lA0A1W2P884 806 aa11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 4930449I24RikQ9D5E3 319 aa11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Ccdc13D3YV10 709 aa11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Mrps27Q8BK72 415 aaKnown RBP11.62□□□□□ -0.55
Col6a3-201ENSMUST00000056925 PrphP15331 475 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Ankrd49Q8VE42 238 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Surf6P70279 355 aaKnown RBP11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Fbxo41Q6NS60 873 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Kif2cQ922S8 721 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Stx12Q9ER00 274 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Sun3Q5SS91 320 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Btbd11Q6GQW0 1109 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Efcab14Q8BGQ6 484 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Znf287Q9EQB9 759 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Stk11Q9WTK7 436 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Hook2Q7TMK6 716 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Cul5Q9D5V5 780 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Traf3ip1Q149C2 625 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Rnf40Q3U319 1001 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Q8R1Y2 203 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Haus2Q9CQS9 234 aa11.61□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Zbtb41Q811F1 908 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Rab11fip4Q8BQP8 635 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Tshz3Q8CGV9 1081 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Atp8b3Q6UQ17 1335 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Ggnbp2Q5SV77 696 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Bcap29Q61334 240 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Rps6ka5Q8C050 863 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Myo1cQ9WTI7 1063 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Rad50P70388 1312 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Jade3Q6IE82 823 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Ncf2O70145 525 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Arl1P61211 181 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Gm10093D3YYI8 482 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Hdac1O09106 482 aaKnown RBP11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Kmt5bQ3U8K7 883 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Atxn3Q9CVD2 355 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Bach2P97303 839 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Actr5Q80US4 605 aaKnown RBP11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Fam204aQ8C6C7 236 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Hdac9Q99N13 588 aa11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Rfwd2Q9R1A8 733 aaKnown RBP11.6□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Arhgap30Q640N3 1101 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Zmynd15Q8C0R7 736 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Sirt1Q923E4 737 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Saal1Q9D2C2 474 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Q9D5Q8 446 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Ankrd2Q9WV06 328 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Dzip1Q8BMD2 852 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 St13Q99L47 371 aaKnown RBP11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Speer4f2E9Q366 295 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Zbtb21E9Q444 1094 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Sycp2lA0A0M3U1B0 842 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Stk10O55098 966 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Hirip3Q8BLH7 601 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Mapk8ip1Q9WVI9 707 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 PrxO55103 1391 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Cnga4Q3UW12 575 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Zranb3Q6NZP1 1069 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Esyt2Q3TZZ7 845 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Ubash3aQ3V3E1 624 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 2310002L09RikQ9D7L5 217 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Taf7Q9R1C0 341 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Ccdc129Q14B48 1034 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Slc51bQ80WK2 128 aa11.59□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Cul9Q80TT8 1865 aa11.58□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Smarca4Q3TKT4 1613 aaKnown RBP11.58□□□□□ -0.55
Col6a3-201ENSMUST00000056925 Faf1P54731 649 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Slc12a2P55012 1205 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Rnf216P58283 853 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 SfswapQ3USH5 945 aaKnown RBP11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Lonp1Q8CGK3 949 aaKnown RBP11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Ppfia4B8QI36 1187 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Atp6v0a2P15920 856 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Eef2P58252 858 aaKnown RBP11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Cwc25Q9DBF7 416 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 LrpprcQ6PB66 1392 aaKnown RBP11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Top2aQ01320 1528 aaKnown RBP11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Dnm1P39053 867 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Unc13aQ4KUS2 1712 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Pds5bQ4VA53 1446 aaKnown RBP11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Tbc1d7Q9D0K0 293 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Taf4bG5E8Z2 855 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Sptlc2P97363 560 aaKnown RBP11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Krit1Q6S5J6 736 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Serpinb13Q8CDC0 389 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Ccdc105Q9D4K7 499 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Capn12Q9ER56 720 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Zc3h18Q0P678 948 aaKnown RBP11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Atp2a1Q8R429 994 aa11.58□□□□□ -0.56
Col6a3-201ENSMUST00000056925 Soga1E1U8D0 1418 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms