RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Large1Q9Z1M7 756 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Npc1l1Q6T3U4 1333 aa11.37□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Prl3d2F6R3P9 224 aa11.37□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Kiaa1524Q8BWY9 907 aa11.37□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Tmem266Q8BZB3 538 aa11.37□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Rec8Q8C5S7 591 aa11.37□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Trim52Q8CDV4 233 aa11.37□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Ccne2Q9Z238 404 aa11.37□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Anks1aP59672 1150 aa11.37□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Pfkfb1P70266 471 aa11.37□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Dnm3Q8BZ98 863 aa11.37□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Acot9Q9R0X4 439 aaKnown RBP11.37□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Pde3aQ9Z0X4 1141 aa11.37□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 AK157302I3ITR1 129 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Cplx1P63040 134 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Nol10Q5RJG1 687 aaKnown RBP11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Mei4Q8BRM6 389 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Cnot6lQ8VEG6 555 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Odf2lQ9D478 642 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Isca1Q9D924 129 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 CoblQ5NBX1 1337 aaKnown RBP11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Ric1Q69ZJ7 1422 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Tpm1P58771 284 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Pald1P70261 859 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Myl10Q62082 202 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 GptQ8QZR5 496 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Nop2Q922K7 793 aaKnown RBP11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Fam213aQ9CYH2 218 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Zeb2Q9R0G7 1215 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Rimbp3Q3V0F0 1606 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Kcna6Q61923 529 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Acap3Q6NXL5 833 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Larp6Q8BN59 492 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 DymQ8CHY3 669 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Sept12Q9D451 317 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Magi2Q9WVQ1 1275 aa11.36□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Ints5Q8CHT3 1018 aa11.35□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Ints4Q8CIM8 964 aa11.35□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Topaz1E5FYH1 1653 aa11.35□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Slc1a4O35874 532 aa11.35□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 LtkP08923 888 aa11.35□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Tpcn2Q8BWC0 731 aa11.35□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Ddx41Q91VN6 622 aaKnown RBP11.35□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 AtrnQ9WU60 1428 aa11.35□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Slit1Q80TR4 1531 aa11.35□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Atf3Q60765 181 aa11.35□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Prpf4bQ61136 1007 aaKnown RBP11.35□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Emilin1Q99K41 1017 aa11.35□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Gm43638A0A0J9YU36 694 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Dnm1P39053 867 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Llgl2Q3TJ91 1027 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Map10Q8BJS7 891 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Zkscan8Q8BSL0 588 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Mical1Q8VDP3 1048 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Ssfa2Q922B9 1252 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Txnrd1Q9JMH6 613 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Grin2dQ03391 1323 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Cyp3a57D3YYZ0 503 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Me1P06801 572 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 MlecQ6ZQI3 291 aaKnown RBP11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Zkscan5Q9Z1D8 819 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Lipo1J3QME6 396 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Ms4a1P19437 291 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Gm28047Q3US59 414 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Panx2Q6IMP4 677 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Acsbg1Q99PU5 721 aa11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Yeats4Q9CR11 227 aaKnown RBP11.34□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 TsksO54887 585 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Cyp26a1O55127 497 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Dnajc2P54103 621 aaKnown RBP11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Irx2P81066 474 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 CtcfQ61164 736 aaKnown RBP11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Edrf1Q6GQV7 1239 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 ImmtQ8CAQ8 757 aaKnown RBP11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Appbp2Q9DAX9 585 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Telo2Q9DC40 840 aaKnown RBP11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Atp12aQ9Z1W8 1035 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Rgs12Q8CGE9 1381 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Gm20425E9Q035 978 aaKnown RBP11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Metap2O08663 478 aaKnown RBP11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Cyp2d9P11714 504 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 SrprbP47758 269 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ftl2P49945 183 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 MpndQ3TV65 487 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Cep120Q7TSG1 988 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Lmod1Q8BVA4 595 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 MbipQ99LQ1 341 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Lmtk3Q5XJV6 1424 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Sik3Q6P4S6 1311 aa11.33□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Znf653Q6YND2 615 aa11.32□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Vps18Q8R307 973 aa11.32□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Ccng2O08918 344 aa11.32□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Znf532Q6NXK2 1036 aa11.32□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Gnl2Q99LH1 728 aaKnown RBP11.32□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Vnn1Q9Z0K8 512 aa11.32□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Sall1Q9ER74 1322 aa11.32□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Diaph1O08808 1255 aa11.32□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Znf326O88291 580 aa11.32□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Gpr182P43142 395 aa11.32□□□□□ -0.6
Ccdc40-202ENSMUST00000053440 Prkag3Q8BGM7 489 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms