RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Zbtb40Q6PCS8 1258 aa22.13■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Trim52Q8CDV4 233 aa22.13■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Znf568E9PYI1 671 aa22.12■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Atg9aQ68FE2 551 aa22.12■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Prl3d2F6R3P9 224 aa22.12■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 InhbeO08717 350 aa22.12■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Zpr1Q62384 459 aa22.12■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Ift57Q8BXG3 429 aa22.12■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Rrs1Q9CYH6 365 aaKnown RBP22.12■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Xpo4Q9ESJ0 1151 aa22.12■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 LratQ9JI60 231 aa22.12■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Carmil3Q3UFQ8 1375 aa22.11■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Gm43638A0A0J9YU36 694 aa22.11■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Cyp2d10P24456 504 aa22.11■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Gm28047Q3US59 414 aa22.11■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Kiaa1524Q8BWY9 907 aa22.11■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Stard3nlQ9DCI3 235 aa22.11■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Pus3Q9JI38 481 aa22.11■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Hspa2P17156 633 aa22.11■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Sptlc2P97363 560 aaKnown RBP22.11■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Abcf1Q6P542 837 aaKnown RBP22.11■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Tmem67Q8BR76 992 aa22.11■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Dnajc14Q921R4 703 aa22.11■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Syde2E9PUP1 1314 aa22.1■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Kif2aP28740 705 aa22.1■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 U2af1l4Q8BGJ9 220 aa22.1■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Frmd3Q8BHD4 595 aa22.1■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Slc39a6Q8C145 765 aa22.1■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 4930572O03RikQ8C5Y0 211 aa22.1■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Psrc1Q9D0P7 329 aa22.1■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Stxbp4Q9WV89 557 aa22.1■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Gm29094F6Q785 221 aa22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Asap2Q7SIG6 958 aa22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Asic4Q7TNS7 539 aa22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Ulbp1Q8HWA3 334 aa22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Ciao1Q99KN2 339 aa22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 MthfsQ9D110 203 aa22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Pald1P70261 859 aa22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 ErmnQ5EBJ4 281 aa22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Itga6Q61739 1091 aa22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Zranb3Q6NZP1 1069 aa22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Lmbrd2Q8C561 694 aa22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 ImmtQ8CAQ8 757 aaKnown RBP22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 PigbQ9JJQ0 542 aa22.09■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Ccng2O08918 344 aa22.08■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Cwc25Q9DBF7 416 aa22.08■■□□□ 1.13
Ccdc50-201ENSMUST00000039443 Ktn1Q61595 1327 aaKnown RBP22.08■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Mrc1Q61830 1456 aa22.08■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Eya2O08575 532 aa22.08■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Spty2d1Q68FG3 682 aa22.08■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Eif3bQ8JZQ9 803 aaKnown RBP22.08■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Ehd4Q9EQP2 541 aa22.08■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Elf2Q9JHC9 593 aa22.08■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Clic4Q9QYB1 253 aa22.08■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Timm10P62073 90 aa22.07■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Cdc37Q61081 379 aa22.07■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Spag5Q7TME2 1165 aa22.07■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Zfp202Q8C879 641 aa22.06■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Rbm17Q8JZX4 405 aaKnown RBP22.06■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 SdsQ8VBT2 327 aa22.06■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Kri1Q8VDQ9 704 aaKnown RBP22.06■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Efcab2Q9CQ46 164 aa22.06■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Cyp2d34L7N463 504 aa22.05■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Myo1bP46735 1107 aa22.05■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Cep55Q8BT07 462 aa22.05■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Eno4Q8C042 619 aa22.05■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Kat6bQ8BRB7 1872 aa22.05■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Chmp3Q9CQ10 224 aa22.05■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Kdm3aQ6PCM1 1323 aa22.04■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Znf326O88291 580 aa22.04■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Tshz1Q5DTH5 1084 aa22.04■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 IqcgQ80W32 419 aa22.04■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Pm20d1Q8C165 503 aa22.04■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Fer1l6E0CZ42 1862 aa22.04■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Tnrc6cQ3UHC0 1690 aaKnown RBP22.04■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Ank1Q02357 1862 aa22.04■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Sf3b2Q3UJB0 878 aaKnown RBP22.04■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Dnm3Q8BZ98 863 aa22.04■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Gtpbp4Q99ME9 634 aaKnown RBP22.04■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Filip1Q9CS72 1211 aa22.04■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Akap11E9Q777 1895 aa22.03■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Cacna1sQ02789 1880 aa22.03■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 GmnnO88513 206 aa22.03■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Rec8Q8C5S7 591 aa22.03■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Dctpp1Q9QY93 170 aa22.03■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Pramel3A2AHA7 463 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Gm7903A2AWL1 463 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 AV320801A2AWL3 467 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Zfp597E9Q6S0 419 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Gm15023L7MUB4 467 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 PsdQ5DTT2 1024 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Nwd2Q6P5U7 1742 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Tpcn2Q8BWC0 731 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Alg3Q8K2A8 438 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Hps3Q91VB4 1002 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Sik3Q6P4S6 1311 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 AK157302I3ITR1 129 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Pfkfb1P70266 471 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Isca1Q9D924 129 aa22.02■■□□□ 1.12
Ccdc50-201ENSMUST00000039443 Vmn2r23E9PXI5 849 aa22.01■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms