RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Prl7a2O54831 253 aa12.21□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Pus3Q9JI38 481 aa12.21□□□□□ -0.45
Rnf40-201ENSMUST00000033088 N4bp2F8VQG7 1678 aaKnown RBP12.21□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Ttc41Q692V3 1318 aa12.21□□□□□ -0.45
Rnf40-201ENSMUST00000033088 Abcc10Q8R4P9 1501 aa12.21□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Myl3P09542 204 aa12.21□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Gngt1Q61012 74 aa12.21□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Rad17Q6NXW6 688 aa12.21□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Tbc1d31Q6NXY1 996 aa12.21□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Rab3gap1Q80UJ7 981 aa12.21□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Hps3Q91VB4 1002 aa12.21□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Terf2ipQ91VL8 393 aa12.21□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Erc1Q99MI1 1120 aa12.21□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Capn12Q9ER56 720 aa12.21□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Cyp2j7A0A140T8U1 504 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Rgs22G3UYX5 1258 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Idi1P58044 227 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Ccdc148Q6P5U8 527 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Lonrf3Q9D4H7 753 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Nphp3Q7TNH6 1325 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Tns3Q5SSZ5 1440 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Fkbp5Q64378 456 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 AmfrQ9R049 643 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 CoblQ5NBX1 1337 aaKnown RBP12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Akr1c19G3X9Y6 323 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Ap1g2O88512 791 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Hspa2P17156 633 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Gsdma3Q5Y4Y6 464 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Bicc1Q99MQ1 977 aaKnown RBP12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Add3Q9QYB5 706 aaKnown RBP12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Iqsec2Q5DU25 1478 aa12.2□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Ddx49Q4FZF3 480 aaKnown RBP12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Abcf1Q6P542 837 aaKnown RBP12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Nxf7Q80SZ6 620 aaKnown RBP12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Prdm4Q80V63 803 aa12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Med1Q925J9 1575 aa12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Zfp597E9Q6S0 419 aa12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Cct6aP80317 531 aaKnown RBP12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Kctd19Q562E2 927 aa12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Gm21985Q6P6P5 1106 aa12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Adck5Q80V03 582 aa12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Etf1Q8BWY3 437 aaKnown RBP12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Sel1lQ9Z2G6 790 aa12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Zfp804bA0A0G2JGH6 1343 aa12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 C5P06684 1680 aa12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Ankrd24Q80VM7 985 aa12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Zfp202Q8C879 641 aa12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Amotl1Q9D4H4 968 aa12.19□□□□□ -0.46
Rnf40-201ENSMUST00000033088 DgkiD3YWQ0 1071 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Rsph10bE9PYQ0 876 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Tm6sf1P58749 370 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Eif3j1Q3UGC7 261 aaKnown RBP12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Eif3j2Q66JS6 263 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Ppp1r10Q80W00 888 aaKnown RBP12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Ttc12Q8BW49 704 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Tsnaxip1Q99P25 704 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Stx17Q9D0I4 301 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Prr29B1ARI9 187 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Ccdc191J3QQ27 883 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Clec11aO88200 328 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Stard3nlQ9DCI3 235 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 TefQ9JLC6 301 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Ercc4Q9QZD4 917 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Myo1cQ9WTI7 1063 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Als2Q920R0 1651 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Cnbd1B1AWM0 430 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Usp28Q5I043 1051 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Fermt3Q8K1B8 665 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Trim11Q99PQ2 467 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Tgfb1i1Q62219 461 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Rps6kb1Q8BSK8 525 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 HgsQ99LI8 775 aa12.18□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Mybbp1aQ7TPV4 1344 aaKnown RBP12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Pet2A2AHY8 747 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Metap2O08663 478 aaKnown RBP12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Slc1a4O35874 532 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 VimP20152 466 aaKnown RBP12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Myo1bP46735 1107 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Rhot2Q8JZN7 620 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 AatfQ9JKX4 526 aaKnown RBP12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Zscan20B2KFW1 1030 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 CalrP14211 416 aaKnown RBP12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Wdr70Q3TWF6 657 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Kmt5bQ3U8K7 883 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 RragbQ6NTA4 374 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Pip4k2bQ80XI4 416 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Commd10Q8JZY2 202 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Cdca7Q9D0M2 382 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Cfap45Q9D9U9 551 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Akap8Q9DBR0 687 aaKnown RBP12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Mon2Q80TL7 1715 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Eya1P97767 591 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Zbtb38Q3LR78 1197 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Naa25Q8BWZ3 972 aa12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Brd3Q8K2F0 726 aaKnown RBP12.17□□□□□ -0.46
Rnf40-201ENSMUST00000033088 CemipQ8BI06 1361 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 MybP06876 636 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Chd4Q6PDQ2 1915 aaKnown RBP12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Nrxn3Q6P9K9 1571 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Ncoa7Q6DFV7 943 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms