RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Sept12Q9D451 317 aa14.89□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Cyp3a59D3Z2W7 503 aa14.88□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Trim34bJ3QNR8 485 aa14.88□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Exoc5Q3TPX4 708 aa14.88□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Lrrc59Q922Q8 307 aaKnown RBP14.88□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Rtn4Q99P72 1162 aaKnown RBP14.88□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Naa16Q9DBB4 864 aa14.88□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Lama4P97927 1816 aa14.88□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Cspp1B2RX88 1205 aa14.88□□□□□ -0.03
Rnf4-201ENSMUST00000030992 NcapgE9PWG6 1004 aa14.88□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Clec11aO88200 328 aa14.88□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Nme8Q715T0 586 aa14.88□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Pcdhb22Q91XZ8 794 aa14.88□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Rrp1P56183 494 aaKnown RBP14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Polr3gQ6NXY9 223 aa14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Abtb2Q7TQI7 1024 aa14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 U2af1l4Q8BGJ9 220 aa14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Znf526Q8BI66 675 aa14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Tsen34Q8BMZ5 316 aa14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Inpp5bQ8K337 993 aa14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Ddx54Q8K4L0 874 aaKnown RBP14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Telo2Q9DC40 840 aaKnown RBP14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Ubn2Q80WC1 1314 aa14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Tpcn2Q8BWC0 731 aa14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Cnot6lQ8VEG6 555 aa14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Ybx3Q9JKB3 361 aaKnown RBP14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Ccng2O08918 344 aa14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Pdia4P08003 638 aaKnown RBP14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Pcdhb15Q91Y04 786 aa14.87□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Fer1l6E0CZ42 1862 aa14.86□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Tcof1O08784 1320 aaKnown RBP14.86□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Tpm3P21107 285 aaKnown RBP14.86□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Ankrd23Q812A3 306 aa14.86□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Rapgef4Q9EQZ6 1011 aa14.86□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Hmgn5Q9JL35 406 aa14.86□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Scn11aQ9R053 1765 aa14.86□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Ncbp1Q3UYV9 790 aaKnown RBP14.86□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Fsd2Q8BZ52 692 aa14.86□□□□□ -0.03
Rnf4-201ENSMUST00000030992 SdsQ8VBT2 327 aa14.86□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Dusp10Q9ESS0 483 aa14.86□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Gm20425E9Q035 978 aaKnown RBP14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Gm4340L7N2C4 268 aa14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 SrprbP47758 269 aa14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Susd4Q8BH32 490 aa14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Slfnl1Q8BHW9 410 aa14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Plekho1Q9JIY0 408 aa14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Rgs12Q8CGE9 1381 aa14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Cfap99A0A140LIX9 648 aa14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Casp12O08736 419 aa14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Acap3Q6NXL5 833 aa14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Atp1a3Q6PIC6 1013 aa14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Nop14Q8R3N1 860 aaKnown RBP14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 CpdO89001 1377 aa14.85□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Nucb2P81117 420 aa14.84□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Ubxn4Q8VCH8 506 aa14.84□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Tulp1Q9Z273 543 aa14.84□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Mroh6V9GX81 722 aa14.84□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Mast3Q3U214 1321 aa14.84□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Lipo1J3QME6 396 aa14.84□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Snrpa1P57784 255 aaKnown RBP14.84□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Esco1Q69Z69 843 aa14.84□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Gimap5Q8BWF2 308 aa14.84□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Cdc45Q9Z1X9 566 aa14.84□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Nhsl1Q8CAF4 1587 aa14.84□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Pramel3A2AHA7 463 aa14.83□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Gm7903A2AWL1 463 aa14.83□□□□□ -0.03
Rnf4-201ENSMUST00000030992 AV320801A2AWL3 467 aa14.83□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Gm15023L7MUB4 467 aa14.83□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Hook1Q8BIL5 728 aa14.83□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Gpatch3Q8BIY1 525 aa14.83□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Odf2lQ9D478 642 aa14.83□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Clic4Q9QYB1 253 aa14.83□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Plch1Q4KWH5 1682 aa14.83□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Kif3aP28741 701 aa14.83□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Gpr108Q91WD0 569 aa14.83□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Zbtb43Q9DAI4 467 aa14.83□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Med23Q80YQ2 1367 aa14.83□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Stx1aO35526 288 aa14.83□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Cyp26a1O55127 497 aa14.83□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Pde6aP27664 859 aa14.83□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Yeats4Q9CR11 227 aaKnown RBP14.83□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Bcl2l12Q9D3J3 255 aa14.83□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Tbc1d8Q9Z1A9 1134 aa14.83□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Frmd7A2AD83 703 aa14.82□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Speer4dL7N216 212 aa14.82□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Prkag3Q8BGM7 489 aa14.82□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Srek1Q8BZX4 494 aaKnown RBP14.82□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Tbc1d7Q9D0K0 293 aa14.82□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Naaladl2A0A0N4SUJ3 795 aa14.82□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Prr29B1ARI9 187 aa14.82□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Wdr78E9PYY5 807 aa14.82□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Ptgs1P22437 602 aa14.82□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Pla2g4fQ50L41 855 aa14.82□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Tex2Q6ZPJ0 1128 aaKnown RBP14.82□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Myh3P13541 1940 aa14.82□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Gm28047Q3US59 414 aa14.81□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Prdm1Q60636 856 aa14.81□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Kiaa0753Q6A000 959 aa14.81□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Slf2Q6P9P0 1278 aa14.81□□□□□ -0.04
Rnf4-201ENSMUST00000030992 Rps6ka5Q8C050 863 aa14.81□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms