RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Bin2D3Z6Q9 489 aa12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 Glg1Q61543 1175 aaKnown RBP12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 Cul9Q80TT8 1865 aa12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 Eif5P59325 429 aaKnown RBP12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ddx27Q921N6 760 aaKnown RBP12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 Kdm3aQ6PCM1 1323 aa12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 MaddQ80U28 1577 aa12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 Aox2Q5SGK3 1345 aa12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 Nphp3Q7TNH6 1325 aa12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 Cyp2c23E9Q5K4 494 aa12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 NpeppsQ11011 920 aa12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 Slfnl1Q8BHW9 410 aa12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 9230110C19RikQ8CC70 267 aa12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 Gm29094F6Q785 221 aa12.5□□□□□ -0.41
Msh3-201ENSMUST00000022220 Atp1b3P97370 278 aa12.5□□□□□ -0.41
Msh3-201ENSMUST00000022220 Mkrn3Q60764 544 aa12.5□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ccdc82Q6PG04 518 aa12.5□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ifi35Q9D8C4 286 aa12.5□□□□□ -0.41
Msh3-201ENSMUST00000022220 WtapQ9ER69 396 aa12.5□□□□□ -0.41
Msh3-201ENSMUST00000022220 Elf2Q9JHC9 593 aa12.5□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ppp1r10Q80W00 888 aaKnown RBP12.5□□□□□ -0.41
Msh3-201ENSMUST00000022220 Triml1Q8BVP1 470 aa12.5□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ccdc129Q14B48 1034 aa12.5□□□□□ -0.41
Msh3-201ENSMUST00000022220 Tmco3Q8BH01 678 aa12.5□□□□□ -0.41
Msh3-201ENSMUST00000022220 Rps6kb1Q8BSK8 525 aa12.5□□□□□ -0.41
Msh3-201ENSMUST00000022220 Trap1aP19473 224 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Dok7Q18PE0 504 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ubash3aQ3V3E1 624 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 March6Q6ZQ89 909 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Acnat2Q8BGG9 420 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Nfe2l3Q9WTM4 660 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Col15a1O35206 1367 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Igfbp6P47880 238 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ripor2Q80U16 1078 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Nid2O88322 1403 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 InsrrQ9WTL4 1300 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Zfp597E9Q6S0 419 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ppfibp2O35711 882 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Pkp1P97350 728 aaKnown RBP12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 NfkbibQ60778 359 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Rnf41Q8BH75 317 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 Taok3Q8BYC6 898 aa12.49□□□□□ -0.41
Msh3-201ENSMUST00000022220 1700029H14RikE9PY36 240 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Fam83bQ0VBM2 1012 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Spg7Q3ULF4 781 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Znf697Q569E7 569 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Eme2Q56A04 373 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Trim56Q80VI1 734 aaKnown RBP12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Dydc2Q9D3X8 139 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 NefhP19246 1090 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Cd22P35329 862 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Nkx2-3P97334 362 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Rreb1Q3UH06 1700 aaKnown RBP12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ano10Q8BH79 659 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Wdr3Q8BHB4 942 aaKnown RBP12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Atp7bQ64446 1462 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Elmsan1E9Q2I4 1089 aaKnown RBP12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Slc1a4O35874 532 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Srp68Q8BMA6 625 aaKnown RBP12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Frat2Q8K025 231 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Appbp2Q9DAX9 585 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Spata31d1bE9QA57 1361 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Abcc4E9Q236 1325 aa12.48□□□□□ -0.41
Msh3-201ENSMUST00000022220 Hspa1lP16627 641 aa12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Map9Q3TRR0 646 aa12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Znhit6Q3UFB2 460 aaKnown RBP12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Zkscan4Q5SZT6 480 aa12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Qser1A2BIE1 1698 aa12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 MypnQ5DTJ9 1315 aa12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Mybbp1aQ7TPV4 1344 aaKnown RBP12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 HmcesQ8R1M0 353 aaKnown RBP12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Cep89Q9CZX2 791 aa12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Simc1E9Q6E9 1354 aa12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Adcy9P51830 1353 aa12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Mdh1bQ5F204 500 aa12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Maats1Q8BRC6 783 aa12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Add3Q9QYB5 706 aaKnown RBP12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Abcc12Q80WJ6 1366 aa12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Abca8aQ8K442 1620 aa12.47□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ccdc85cE9Q6B2 420 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 Trim55G3X8Y1 545 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 Nlrp1aQ2LKU9 1182 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 ArsiQ32KI9 573 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ccdc34Q3UI66 367 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 Cyp24a1Q64441 514 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 Arid5bQ8BM75 1188 aaKnown RBP12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 SelenooQ9DBC0 667 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 Jakmip2D3YXK0 820 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 Usp5P56399 858 aaKnown RBP12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 TfrcQ62351 763 aaKnown RBP12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ints5Q8CHT3 1018 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 Slc4a8Q8JZR6 1089 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ppp4r3bQ922R5 820 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 St5Q924W7 1134 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ltb4r2Q9JJL9 360 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 AatfQ9JKX4 526 aaKnown RBP12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 Nrxn1Q9CS84 1514 aa12.46□□□□□ -0.41
Msh3-201ENSMUST00000022220 InhbeO08717 350 aa12.46□□□□□ -0.42
Msh3-201ENSMUST00000022220 Hspd1P63038 573 aaKnown RBP12.46□□□□□ -0.42
Msh3-201ENSMUST00000022220 CtifQ6PEE2 600 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms