RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	FAM90A24P	P0C7X0	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	LMO4	P61968	165 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	PIGY	Q3MUY2	71 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	RAB40A	Q8WXH6	277 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	PHF21A	Q96BD5	680 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	SEH1L	Q96EE3	360 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	TMEM246	Q9BRR3	403 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	TM2D1	Q9BX74	207 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	LPAR5	Q9H1C0	372 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	ATG5	Q9H1Y0	275 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	ZNF665	Q9H7R5	613 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	OR14J1	Q9UGF5	321 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	PEX16	Q9Y5Y5	336 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	ABCA2	Q9BZC7	2435 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	OR2AT4	A6NND4	320 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	CEACAM18	A8MTB9	384 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM25A	B3EWG3	89 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM25C	B3EWG5	89 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM25G	B3EWG6	89 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	HPGDS	O60760	199 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	SCGN	O76038	276 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	IGHV2-5	P01817	119 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	S100A5	P33763	92 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	PITPNB	P48739	271 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	EFNB2	P52799	333 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	PLA2G7	Q13093	441 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	ZNF146	Q15072	292 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	MPV17L	Q2QL34	196 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	TMEM249	Q2WGJ8	235 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	OR56B1	Q8NGI3	324 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	S100A16	Q96FQ6	103 aa	Known RBP	18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	ABCG5	Q9H222	651 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	IL36RN	Q9UBH0	155 aa		18.32	■□□□□ 0.52
LTBP4-227	ENST00000600026	RFPL4A	A6NLU0	287 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	RFPL4AL1	F8VTS6	287 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	CTDSP2	O14595	271 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	GEMIN2	O14893	280 aa	Known RBP	18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	NDUFA2	O43678	99 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	CLPX	O76031	633 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	HAND1	O96004	215 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	APOA1	P02647	267 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	CHRM2	P08172	466 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	PSG2	P11465	335 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	FOSL1	P15407	271 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	GABRR1	P24046	479 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	IKZF1	Q13422	519 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	TAF9	Q16594	264 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	OR5T2	Q8NGG2	359 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	RAB39B	Q96DA2	213 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	SLC25A38	Q96DW6	304 aa		18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	SEBOX	Q9HB31	216 aa	Predicted RBP	18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	PATZ1	Q9HBE1	687 aa	Known RBP	18.31	■□□□□ 0.52
LTBP4-227	ENST00000600026	MTOR	P42345	2549 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	NKX6-3	A6NJ46	265 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026		F5H0A9	414 aa	Predicted RBP	18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	DEGS1	O15121	323 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	OR7C1	O76099	320 aa	Predicted RBP	18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	GYPA	P02724	150 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	IGHV4-31	P0DP07	118 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	ZNF44	P15621	663 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	DUSP1	P28562	367 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	PRDX2	P32119	198 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	GABRA2	P47869	451 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	VEGFC	P49767	419 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	SCN1B	Q07699	218 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	STUM	Q69YW2	141 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	RAB12	Q6IQ22	244 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	DCDC5	Q6ZRR9	648 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	CMTM4	Q8IZR5	234 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM89B	Q8N5H3	189 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	NICN1	Q9BSH3	213 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	DNTTIP1	Q9H147	329 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	DIABLO	Q9NR28	239 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	PCDHB10	Q9UN67	800 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	DNHD1	Q96M86	4753 aa		18.3	■□□□□ 0.52
LTBP4-227	ENST00000600026	MED13L	Q71F56	2210 aa		18.29	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM157A	C9JC47	383 aa		18.29	■□□□□ 0.52
LTBP4-227	ENST00000600026	EIF4E	P06730	217 aa	Known RBP	18.29	■□□□□ 0.52
LTBP4-227	ENST00000600026	HEXA	P06865	529 aa		18.29	■□□□□ 0.52
LTBP4-227	ENST00000600026	RPS2	P15880	293 aa	Known RBP	18.29	■□□□□ 0.52
LTBP4-227	ENST00000600026	LYPD2	Q6UXB3	125 aa		18.29	■□□□□ 0.52
LTBP4-227	ENST00000600026	ANGPTL6	Q8NI99	470 aa		18.29	■□□□□ 0.52
LTBP4-227	ENST00000600026	NEDD4L	Q96PU5	975 aa		18.29	■□□□□ 0.52
LTBP4-227	ENST00000600026	SPACA1	Q9HBV2	294 aa		18.29	■□□□□ 0.52
LTBP4-227	ENST00000600026	IGKV1D-17	A0A075B6S4	117 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026		A0A0A6YYH2	397 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026		A6NJ64	397 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	TNFRSF13B	O14836	293 aa	Predicted RBP	18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	ELK1	P19419	428 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	BLVRB	P30043	206 aa	Predicted RBP	18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	TALDO1	P37837	337 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	GZMK	P49863	264 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	KRTAP1-1	Q07627	177 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	ATAD3C	Q5T2N8	411 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	ATPAF1	Q5TC12	328 aa	Predicted RBP	18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	LAX1	Q8IWV1	398 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	CHST4	Q8NCG5	386 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	OR10R2	Q8NGX6	335 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	C1orf159	Q96HA4	380 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	SMR3A	Q99954	134 aa		18.28	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms