RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 FAM90A15PP0C7V4 464 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 FAM90A13PP0C7W8 464 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 FAM90A14PP0C7W9 464 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 FAM90A24PP0C7X0 464 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 SELLP14151 372 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 SNRPBP14678 240 aaKnown RBP15.01□□□□□ -0.01
PSEN1-208ENST00000553719 RAB6AP20340 208 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 USF1P22415 310 aaPredicted RBP15.01□□□□□ -0.01
PSEN1-208ENST00000553719 DUSP1P28562 367 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 RORCP51449 518 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 EFNB2P52799 333 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 SNU13P55769 128 aaKnown RBP15.01□□□□□ -0.01
PSEN1-208ENST00000553719 DYNC1I2Q13409 638 aaKnown RBP15.01□□□□□ -0.01
PSEN1-208ENST00000553719 FAM89BQ8N5H3 189 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 FAM216BQ8N7L0 139 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 OR5H6Q8NGV6 325 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 DGCR14Q96DF8 476 aaKnown RBP15.01□□□□□ -0.01
PSEN1-208ENST00000553719 C1orf159Q96HA4 380 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 SELENOIQ9C0D9 397 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 ZNF665Q9H7R5 613 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 ABRACLQ9P1F3 81 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 RCC2Q9P258 522 aaKnown RBP15.01□□□□□ -0.01
PSEN1-208ENST00000553719 MIOXQ9UGB7 285 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 OR14J1Q9UGF5 321 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 MAST4O15021 2626 aa15.01□□□□□ -0.01
PSEN1-208ENST00000553719 YLPM1P49750 1951 aaKnown RBP15□□□□□ -0.01
PSEN1-208ENST00000553719 TMEM82A0PJX8 343 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 CCDC160A6NGH7 325 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 ADAM20O43506 726 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 OR2H2O95918 312 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 RPS2P15880 293 aaKnown RBP15□□□□□ -0.01
PSEN1-208ENST00000553719 SEC61A1P61619 476 aaKnown RBP15□□□□□ -0.01
PSEN1-208ENST00000553719 IL13RA1P78552 427 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 TAF9Q16594 264 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 MPV17LQ2QL34 196 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 SIGIRRQ6IA17 410 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 SPNS3Q6ZMD2 512 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 C17orf107Q6ZR85 190 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 ZNF561Q8N587 486 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 SLC25A38Q96DW6 304 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 NEIL1Q96FI4 390 aaPredicted RBP15□□□□□ -0.01
PSEN1-208ENST00000553719 NICN1Q9BSH3 213 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 ETV7Q9Y603 341 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 MED13LQ71F56 2210 aa15□□□□□ -0.01
PSEN1-208ENST00000553719 TRAV24A0A0B4J272 114 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 NKX6-3A6NJ46 265 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 A8MXK9 166 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 SLC33A1O00400 549 aaPredicted RBP14.99□□□□□ -0.01
PSEN1-208ENST00000553719 TMPRSS2O15393 492 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 PSPNO60542 156 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 CHRM2P08172 466 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 ZNF182P17025 639 aaPredicted RBP14.99□□□□□ -0.01
PSEN1-208ENST00000553719 GABRA2P47869 451 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 COL10A1Q03692 680 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 SLC36A1Q7Z2H8 476 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 CHST4Q8NCG5 386 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 SLIRPQ9GZT3 109 aaKnown RBP14.99□□□□□ -0.01
PSEN1-208ENST00000553719 SHARPINQ9H0F6 387 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 BATF3Q9NR55 127 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 RAB22AQ9UL26 194 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 SPATA2Q9UM82 520 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 MALRD1Q5VYJ5 2156 aa14.99□□□□□ -0.01
PSEN1-208ENST00000553719 KIAA1324LA8MWY0 1029 aaPredicted RBP14.98□□□□□ -0.01
PSEN1-208ENST00000553719 K7N7A8 449 aa14.98□□□□□ -0.01
PSEN1-208ENST00000553719 SH2D1BO14796 132 aa14.98□□□□□ -0.01
PSEN1-208ENST00000553719 IKZF1Q13422 519 aa14.98□□□□□ -0.01
PSEN1-208ENST00000553719 PDCD1Q15116 288 aa14.98□□□□□ -0.01
PSEN1-208ENST00000553719 METAP1DQ6UB28 335 aaPredicted RBP14.98□□□□□ -0.01
PSEN1-208ENST00000553719 CIARTQ8N365 385 aaPredicted RBP14.98□□□□□ -0.01
PSEN1-208ENST00000553719 FGFRL1Q8N441 504 aa14.98□□□□□ -0.01
PSEN1-208ENST00000553719 ZNRF1Q8ND25 227 aa14.98□□□□□ -0.01
PSEN1-208ENST00000553719 ACOT12Q8WYK0 555 aa14.98□□□□□ -0.01
PSEN1-208ENST00000553719 RAB39BQ96DA2 213 aa14.98□□□□□ -0.01
PSEN1-208ENST00000553719 MED30Q96HR3 178 aa14.98□□□□□ -0.01
PSEN1-208ENST00000553719 CYYR1Q96J86 154 aa14.98□□□□□ -0.01
PSEN1-208ENST00000553719 COX4I2Q96KJ9 171 aa14.98□□□□□ -0.01
PSEN1-208ENST00000553719 NXF2Q9GZY0 626 aaKnown RBP14.98□□□□□ -0.01
PSEN1-208ENST00000553719 FAM234AQ9H0X4 552 aa14.98□□□□□ -0.01
PSEN1-208ENST00000553719 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.97□□□□□ -0.01
PSEN1-208ENST00000553719 FAM157AC9JC47 383 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 SIRPB1O00241 398 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 DVL1O14640 695 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 OR7C1O76099 320 aaPredicted RBP14.97□□□□□ -0.01
PSEN1-208ENST00000553719 CHATP28329 748 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 OR3A1P47881 315 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 PITPNBP48739 271 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 WDR25Q64LD2 544 aaPredicted RBP14.97□□□□□ -0.01
PSEN1-208ENST00000553719 NLRC3Q7RTR2 1065 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 OR8B3Q8NGG8 313 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 DACT3Q96B18 629 aaPredicted RBP14.97□□□□□ -0.01
PSEN1-208ENST00000553719 SNX22Q96L94 193 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 OR8B2Q96RD0 313 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 URM1Q9BTM9 101 aaKnown RBP14.97□□□□□ -0.01
PSEN1-208ENST00000553719 RHBDL2Q9NX52 303 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 GLS2Q9UI32 602 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 PCDHB10Q9UN67 800 aa14.97□□□□□ -0.01
PSEN1-208ENST00000553719 ANK3Q12955 4377 aaKnown RBP14.96□□□□□ -0.01
PSEN1-208ENST00000553719 RAB27BO00194 218 aa14.96□□□□□ -0.01
PSEN1-208ENST00000553719 DEGS1O15121 323 aa14.96□□□□□ -0.01
PSEN1-208ENST00000553719 TK1P04183 234 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms