RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Yif1aQ91XB7 293 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Ythdf2Q91YT7 579 aaKnown RBP13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Igkv5-45A0A0B4J1J1 115 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Calhm1D3Z291 348 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Fcn2O70497 314 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Lancl1O89112 399 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Tgfb1P04202 390 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Hmgn2P09602 90 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 St3gal2Q11204 350 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Klf11Q8K1S5 502 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Olfr1427Q8VFU9 311 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Lhx6Q9R1R0 363 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Zfp114B2RRA8 586 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 P2rx6O54803 389 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Sox7P40646 380 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Psg19Q4KL31 475 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Paqr9Q6TCG2 375 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Olfr527Q7TRT9 305 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Oraov1Q8CH62 137 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Wfikkn1Q8R0S6 552 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Cisd2Q9CQB5 135 aaKnown RBP13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Zfp111Q9R164 701 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 CnmdQ9Z1F6 334 aa13.24□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Thsd7aQ69ZU6 1645 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Scgb1b3J3QJY4 93 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 G530012D18RikJ3QK25 139 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Igsf6P0C6B7 237 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 EnsaP60840 121 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Olfr360Q8VFP3 317 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Insl6Q9QY05 191 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Zfp930A0A1D5RM15 441 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 9330182O14RikJ3QNB2 140 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Dscr3O35075 297 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Htr5aP30966 357 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Bmp5P49003 452 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Gm525Q3V3I5 90 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Taar5Q5QD14 337 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Olfr374Q7TRY0 313 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Atpaf1Q811I0 324 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Rae1Q8C570 368 aaKnown RBP13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Necap1Q9CR95 275 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Phf19Q9CXG9 578 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Ube2v2Q9D2M8 145 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 GrinaQ9ESF4 345 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Vmn1r67G5E8C1 305 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Mcpt9O35164 246 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Csf3P09920 208 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 GzmaP11032 260 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Timp2P25785 220 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Sox18P43680 377 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 GastP48757 101 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Slc25a31Q3V132 320 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Zdhhc8Q5Y5T5 762 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Ogfod3Q9D136 315 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Lgals8Q9JL15 316 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 BatfO35284 125 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Tbx15O70306 602 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Hes1P35428 282 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Mrpl22Q8BU88 206 aaKnown RBP13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Ntng2Q8R4F1 589 aaKnown RBP13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Olfr1038Q8VGS1 319 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Slc48a1Q9D8M3 146 aa13.23□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Lrp5Q91VN0 1614 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Gm10778A0A087WNP5 499 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 5430403G16RikD3Z5L4 667 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Vmn2r83E9Q0G7 864 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Vmn1r11Q3SXA2 299 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Ptpn18Q61152 453 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Hand1Q64279 216 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Chrm5Q920H4 532 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Bbc3Q99ML1 193 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Rarres2Q9DD06 162 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Arl3Q9WUL7 182 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Igkv12-98A0A0G2JGF9 115 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Gm15056F6ZR08 88 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Olfr199F6ZUS0 308 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 SrgnP13609 152 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Ca10P61215 328 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Gm6760Q0ZNK3 87 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 OpalinQ7M750 143 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Anapc16Q9CPV2 110 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Ndufaf3Q9JKL4 185 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Olfr1097A2AVA9 315 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 CamlgP49070 294 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Chrna7P49582 502 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Fzd8Q61091 685 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Rbm38Q62176 237 aaKnown RBP13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Paqr8Q80ZE5 354 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Nmes1Q810Q5 83 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Olfr1446Q8VFX4 308 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Olfr638Q8VH20 321 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Sectm1aQ921W8 192 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Adam11Q9R1V4 773 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Arg2O08691 354 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Lin7cO88952 197 aaKnown RBP13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Prss2P07146 246 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Tcl1aP56280 116 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Olfr479Q7TRV1 327 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Sphk2Q9JIA7 617 aa13.22□□□□□ -0.29
Pcdha1-201ENSMUST00000070797 Ltn1Q6A009 1767 aa13.21□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms