RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 OR4S1Q8NGB4 309 aa15.52■□□□□ 0.08
SF3A1-202ENST00000411423 OR5AK2Q8NH90 309 aa15.52■□□□□ 0.08
SF3A1-202ENST00000411423 TBC1D15Q8TC07 691 aa15.52■□□□□ 0.08
SF3A1-202ENST00000411423 MRPL48Q96GC5 212 aaKnown RBP15.52■□□□□ 0.08
SF3A1-202ENST00000411423 CHST6Q9GZX3 395 aa15.52■□□□□ 0.08
SF3A1-202ENST00000411423 ZCCHC4Q9H5U6 513 aa15.52■□□□□ 0.08
SF3A1-202ENST00000411423 FAM96BQ9Y3D0 163 aa15.52■□□□□ 0.08
SF3A1-202ENST00000411423 TMEM212A6NML5 194 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 C17orf98A8MV24 154 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 FBP1P09467 338 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 PRKACAP17612 351 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 RAG2P55895 527 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 KRTAP10-3P60369 221 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 ACSM1Q08AH1 577 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 IL18R1Q13478 541 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 ZNF146Q15072 292 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 OR8H2Q8N162 312 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 PARP16Q8N5Y8 322 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 PACRGLQ8N7B6 248 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 OR51A2Q8NGJ7 313 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 OR5D13Q8NGL4 314 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 DYRK2Q92630 601 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 SNX22Q96L94 193 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 NKX3-1Q99801 234 aaPredicted RBP15.51■□□□□ 0.07
SF3A1-202ENST00000411423 SEBOXQ9HB31 216 aaPredicted RBP15.51■□□□□ 0.07
SF3A1-202ENST00000411423 HMG20AQ9NP66 347 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 DSCAML1Q8TD84 2053 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 CMYA5Q8N3K9 4069 aa15.51■□□□□ 0.07
SF3A1-202ENST00000411423 NBEAL1Q6ZS30 2694 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 MEGF11A6BM72 1044 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 CASQ2O14958 399 aaPredicted RBP15.5■□□□□ 0.07
SF3A1-202ENST00000411423 KDM4BO94953 1096 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 NDUFA7O95182 113 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 CCDC159P0C7I6 412 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 COX7A1P24310 79 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 OR3A1P47881 315 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 SOX2P48431 317 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 EDDM3BP56851 147 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 EDDM3AQ14507 147 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 CDK5R1Q15078 307 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 LDLRAD2Q5SZI1 272 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 TTC23Q5W5X9 447 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 ZNF529Q6P280 563 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 Q8IYB0 196 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 DHRSXQ8N5I4 330 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 GGHQ92820 318 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 CAB39Q9Y376 341 aaPredicted RBP15.5■□□□□ 0.07
SF3A1-202ENST00000411423 SF3B6Q9Y3B4 125 aaKnown RBP15.5■□□□□ 0.07
SF3A1-202ENST00000411423 MMP24Q9Y5R2 645 aa15.5■□□□□ 0.07
SF3A1-202ENST00000411423 SULT1B1O43704 296 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 DCKP27707 260 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 MRPL28Q13084 256 aaKnown RBP15.49■□□□□ 0.07
SF3A1-202ENST00000411423 SHISA2Q6UWI4 295 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 LHFPL4Q7Z7J7 247 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 SERPINA12Q8IW75 414 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 DYNAPQ8N1N2 210 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 ZNF485Q8NCK3 441 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 BEND2Q8NDZ0 799 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 OR13C5Q8NGS8 318 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 TSEN15Q8WW01 171 aaKnown RBP15.49■□□□□ 0.07
SF3A1-202ENST00000411423 ORAI1Q96D31 301 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 COMMD4Q9H0A8 199 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 TAS2R4Q9NYW5 299 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 NKX1-2Q9UD57 310 aaPredicted RBP15.49■□□□□ 0.07
SF3A1-202ENST00000411423 DIMT1Q9UNQ2 313 aaKnown RBP15.49■□□□□ 0.07
SF3A1-202ENST00000411423 DHDHQ9UQ10 334 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 GSTK1Q9Y2Q3 226 aa15.49■□□□□ 0.07
SF3A1-202ENST00000411423 SIRPB1O00241 398 aa15.48■□□□□ 0.07
SF3A1-202ENST00000411423 ALX3O95076 343 aa15.48■□□□□ 0.07
SF3A1-202ENST00000411423 GABRR1P24046 479 aa15.48■□□□□ 0.07
SF3A1-202ENST00000411423 KISS1Q15726 138 aa15.48■□□□□ 0.07
SF3A1-202ENST00000411423 GRK1Q15835 563 aa15.48■□□□□ 0.07
SF3A1-202ENST00000411423 MIDNQ504T8 468 aa15.48■□□□□ 0.07
SF3A1-202ENST00000411423 Q6P435 159 aa15.48■□□□□ 0.07
SF3A1-202ENST00000411423 RPL22L1Q6P5R6 122 aaKnown RBP15.48■□□□□ 0.07
SF3A1-202ENST00000411423 Q6ZSV7 163 aa15.48■□□□□ 0.07
SF3A1-202ENST00000411423 GDPD3Q7L5L3 318 aa15.48■□□□□ 0.07
SF3A1-202ENST00000411423 WFDC12Q8WWY7 111 aa15.48■□□□□ 0.07
SF3A1-202ENST00000411423 DPAGT1Q9H3H5 408 aa15.48■□□□□ 0.07
SF3A1-202ENST00000411423 VPREB3Q9UKI3 123 aa15.48■□□□□ 0.07
SF3A1-202ENST00000411423 POM121CA8CG34 1229 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 OGG1O15527 345 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 XPNPEP2O43895 674 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 MMP23AO75900 390 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 OR2H2O95918 312 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 CYB5AP00167 134 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 CRYBA1P05813 215 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 HCKP08631 526 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 ZNF728P0DKX0 622 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 CAPGP40121 348 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 SPIN3Q5JUX0 258 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 BAIAP2L2Q6UXY1 529 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 ZFP41Q8N8Y5 198 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 LINC01006Q8NI28 216 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 PIFOQ8TCI5 191 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 FBLIM1Q8WUP2 373 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 MYCBPQ99417 103 aaPredicted RBP15.47■□□□□ 0.07
SF3A1-202ENST00000411423 MEGF9Q9H1U4 602 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 C8orf4Q9NR00 106 aa15.47■□□□□ 0.07
SF3A1-202ENST00000411423 ODF3BA8MYP8 253 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms