RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 RUFY3Q7L099 469 aa-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 LHFPL5Q8TAF8 219 aa-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 C2orf15Q8WU43 125 aaKnown RBP-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 RPEQ96AT9 228 aa-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 CLDN23Q96B33 292 aa-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 DTNBP1Q96EV8 351 aa-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 GABRG3Q99928 467 aa-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 STMN4Q9H169 189 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 ARV1Q9H2C2 271 aa-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 PXMP2Q9NR77 195 aa-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 CLN6Q9NWW5 311 aa-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 NDRG2Q9UN36 371 aaKnown RBP-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 HEY1Q9Y5J3 304 aa-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 PUS1Q9Y606 427 aaKnown RBP eCLIP-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 USP42Q9H9J4 1324 aaKnown RBP-0.91□□□□□ -2.56
RNU6-238P-201ENST00000363313 USH2AO75445 5202 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 NCOA6Q14686 2063 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 UBR4Q5T4S7 5183 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 FAM240BA0A1B0GVZ2 78 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 UPK1AO00322 258 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 ERI3O43414 337 aaKnown RBP-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 SCN2BO60939 215 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 NPPAP01160 153 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 HBE1P02100 147 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 ANXA5P08758 320 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 ZNF24P17028 368 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 CNTFRP26992 372 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 PEBP1P30086 187 aaKnown RBP-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 HNRNPA1L2Q32P51 320 aaKnown RBP-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 WDR82Q6UXN9 313 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 NIT1Q86X76 327 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 FAM19A2Q8N3H0 131 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 BBS5Q8N3I7 341 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 ZNF283Q8N7M2 679 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 UQCC2Q9BRT2 126 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 SRRQ9GZT4 340 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 DBNDD1Q9H9R9 158 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 SNX6Q9UNH7 406 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 LRP2P98164 4655 aa-0.92□□□□□ -2.56
RNU6-238P-201ENST00000363313 PTPRZ1P23471 2315 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 ZNF462Q96JM2 2506 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 ATAD5Q96QE3 1844 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 SLC37A4O43826 429 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 SOX14O95416 240 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 HSPA5P11021 654 aaKnown RBP-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 ATF1P18846 271 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 CRABP1P29762 137 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 CFAP157Q5JU67 520 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 TMEM215Q68D42 235 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 RWDD4Q6NW29 188 aaKnown RBP-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 OR9K2Q8NGE7 335 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 OR5T3Q8NGG3 340 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 ERMNQ8TAM6 284 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 KIFAP3Q92845 792 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 HIST1H2BAQ96A08 127 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 MRPL20Q9BYC9 149 aaKnown RBP-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 ROPN1BQ9BZX4 212 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 VCX2Q9H322 139 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 TMEM165Q9HC07 324 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 VCX3AQ9NNX9 186 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 RBM22Q9NW64 420 aaKnown RBP eCLIP-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 PSMC3IPQ9P2W1 217 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 PPIL1Q9Y3C6 166 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 LINC00588Q9Y4M8 146 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 HIVEP3Q5T1R4 2406 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 TNXBP22105 4242 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 MIA3Q5JRA6 1907 aa-0.93□□□□□ -2.56
RNU6-238P-201ENST00000363313 DOPEY1Q5JWR5 2465 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 MEIKINA0A087WXM9 373 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 TRBV9A0A0B4J1U6 114 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 OR2A4O95047 310 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 CST1P01037 141 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 ERCC1P07992 297 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 IMPA1P29218 277 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 ACAA2P42765 397 aaKnown RBP-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 RAB7AP51149 207 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 ELP6Q0PNE2 266 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 ZCWPW2Q504Y3 356 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 BBOF1Q8ND07 529 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 OR4X2Q8NGF9 303 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 LYPD6BQ8NI32 183 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 CAPSLQ8WWF8 208 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 ASZ1Q8WWH4 475 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 TUBGCP3Q96CW5 907 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 OR2A7Q96R45 310 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 AP3M1Q9Y2T2 418 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 COL1A1P02452 1464 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 MYH11P35749 1972 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 TNRC6AQ8NDV7 1962 aaKnown RBP-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 ZFYVE26Q68DK2 2539 aa-0.94□□□□□ -2.56
RNU6-238P-201ENST00000363313 KIAA1109Q2LD37 5005 aa-0.95□□□□□ -2.56
RNU6-238P-201ENST00000363313 PCDH15Q96QU1 1955 aa-0.95□□□□□ -2.56
RNU6-238P-201ENST00000363313 A0A1B0GVG6 124 aa-0.95□□□□□ -2.56
RNU6-238P-201ENST00000363313 ZNF99A8MXY4 864 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-238P-201ENST00000363313 GUSBP08236 651 aa-0.95□□□□□ -2.56
RNU6-238P-201ENST00000363313 ALOX5APP20292 161 aa-0.95□□□□□ -2.56
RNU6-238P-201ENST00000363313 HINT1P49773 126 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-238P-201ENST00000363313 CCDC152Q4G0S7 254 aa-0.95□□□□□ -2.56
RNU6-238P-201ENST00000363313 GRINAQ7Z429 371 aa-0.95□□□□□ -2.56
RNU6-238P-201ENST00000363313 RAB43Q86YS6 212 aa-0.95□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms