RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
RNU6-238P-201ENST00000363313 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
RNU6-238P-201ENST00000363313 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
RNU6-238P-201ENST00000363313 PHF23Q9BUL5 403 aaPredicted RBP17.07■□□□□ 0.32
RNU6-238P-201ENST00000363313 FOXD1Q16676 465 aa16.13■□□□□ 0.17
RNU6-238P-201ENST00000363313 MSH5O43196 834 aa15.28■□□□□ 0.04
RNU6-238P-201ENST00000363313 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
RNU6-238P-201ENST00000363313 POTEDQ86YR6 584 aa15.08■□□□□ 0
RNU6-238P-201ENST00000363313 PIAS4Q8N2W9 510 aaPredicted RBP15.02■□□□□ -0
RNU6-238P-201ENST00000363313 PPP6R1Q9UPN7 881 aa14.9□□□□□ -0.02
RNU6-238P-201ENST00000363313 ADRA2BP18089 450 aa14.83□□□□□ -0.04
RNU6-238P-201ENST00000363313 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
RNU6-238P-201ENST00000363313 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
RNU6-238P-201ENST00000363313 MAPK8IP2Q13387 824 aaPredicted RBP13.65□□□□□ -0.22
RNU6-238P-201ENST00000363313 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
RNU6-238P-201ENST00000363313 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
RNU6-238P-201ENST00000363313 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
RNU6-238P-201ENST00000363313 CACNB1Q02641 598 aaPredicted RBP13.12□□□□□ -0.31
RNU6-238P-201ENST00000363313 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
RNU6-238P-201ENST00000363313 DCAF8L1A6NGE4 600 aa13.05□□□□□ -0.32
RNU6-238P-201ENST00000363313 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
RNU6-238P-201ENST00000363313 DNAJC5BQ9UF47 199 aa12.94□□□□□ -0.34
RNU6-238P-201ENST00000363313 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
RNU6-238P-201ENST00000363313 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
RNU6-238P-201ENST00000363313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.41
RNU6-238P-201ENST00000363313 NPM3O75607 178 aaKnown RBP12.49□□□□□ -0.41
RNU6-238P-201ENST00000363313 U3KPZ7 1027 aaPredicted RBP12.2□□□□□ -0.46
RNU6-238P-201ENST00000363313 DSG3P32926 999 aa12.06□□□□□ -0.48
RNU6-238P-201ENST00000363313 CAPN15O75808 1086 aa12.05□□□□□ -0.48
RNU6-238P-201ENST00000363313 KCNA4P22459 653 aa12.05□□□□□ -0.48
RNU6-238P-201ENST00000363313 APLP2Q06481 763 aa12.04□□□□□ -0.48
RNU6-238P-201ENST00000363313 SPINK5Q9NQ38 1064 aaPredicted RBP12.02□□□□□ -0.49
RNU6-238P-201ENST00000363313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.97□□□□□ -0.49
RNU6-238P-201ENST00000363313 SLC4A2P04920 1241 aa11.97□□□□□ -0.49
RNU6-238P-201ENST00000363313 HNRNPUL2Q1KMD3 747 aaKnown RBP11.97□□□□□ -0.49
RNU6-238P-201ENST00000363313 ZNF219Q9P2Y4 722 aaPredicted RBP11.9□□□□□ -0.5
RNU6-238P-201ENST00000363313 SAMD1Q6SPF0 538 aaPredicted RBP11.84□□□□□ -0.51
RNU6-238P-201ENST00000363313 POTEHQ6S545 545 aa11.81□□□□□ -0.52
RNU6-238P-201ENST00000363313 TRHP20396 242 aaPredicted RBP11.79□□□□□ -0.52
RNU6-238P-201ENST00000363313 ABCB7O75027 752 aa11.67□□□□□ -0.54
RNU6-238P-201ENST00000363313 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
RNU6-238P-201ENST00000363313 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
RNU6-238P-201ENST00000363313 POLA2Q14181 598 aa11.48□□□□□ -0.57
RNU6-238P-201ENST00000363313 SLC4A1APQ9BWU0 796 aaKnown RBP11.4□□□□□ -0.58
RNU6-238P-201ENST00000363313 FOXD4L1Q9NU39 408 aa11.39□□□□□ -0.59
RNU6-238P-201ENST00000363313 ZBTB12Q9Y330 459 aaPredicted RBP11.38□□□□□ -0.59
RNU6-238P-201ENST00000363313 CHRDL2Q6WN34 429 aa11.34□□□□□ -0.59
RNU6-238P-201ENST00000363313 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
RNU6-238P-201ENST00000363313 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
RNU6-238P-201ENST00000363313 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
RNU6-238P-201ENST00000363313 REM2Q8IYK8 340 aaPredicted RBP11.11□□□□□ -0.63
RNU6-238P-201ENST00000363313 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
RNU6-238P-201ENST00000363313 ZBTB22O15209 634 aa11.04□□□□□ -0.64
RNU6-238P-201ENST00000363313 PIP4P2Q8N4L2 257 aa11□□□□□ -0.65
RNU6-238P-201ENST00000363313 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
RNU6-238P-201ENST00000363313 SPDYE2BA6NHP3 402 aa10.97□□□□□ -0.65
RNU6-238P-201ENST00000363313 SPDYE6P0CI01 402 aa10.97□□□□□ -0.65
RNU6-238P-201ENST00000363313 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
RNU6-238P-201ENST00000363313 SPDYE2Q495Y8 402 aa10.97□□□□□ -0.65
RNU6-238P-201ENST00000363313 FBLN2P98095 1184 aa10.96□□□□□ -0.65
RNU6-238P-201ENST00000363313 PITPNM1O00562 1244 aa10.95□□□□□ -0.66
RNU6-238P-201ENST00000363313 HAX1O00165 279 aa10.85□□□□□ -0.67
RNU6-238P-201ENST00000363313 SPDYE1Q8NFV5 336 aaPredicted RBP10.8□□□□□ -0.68
RNU6-238P-201ENST00000363313 SSUH2Q9Y2M2 353 aa10.76□□□□□ -0.69
RNU6-238P-201ENST00000363313 MKRN4PQ13434 485 aaPredicted RBP10.75□□□□□ -0.69
RNU6-238P-201ENST00000363313 ZNF692Q9BU19 519 aaPredicted RBP10.74□□□□□ -0.69
RNU6-238P-201ENST00000363313 PRKAR2AP13861 404 aaKnown RBP10.68□□□□□ -0.7
RNU6-238P-201ENST00000363313 CLEC11AQ9Y240 323 aa10.68□□□□□ -0.7
RNU6-238P-201ENST00000363313 EVX2Q03828 476 aa10.63□□□□□ -0.71
RNU6-238P-201ENST00000363313 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
RNU6-238P-201ENST00000363313 PRR29P0C7W0 189 aa10.56□□□□□ -0.72
RNU6-238P-201ENST00000363313 PABPN1Q86U42 306 aaKnown RBP eCLIP10.55□□□□□ -0.72
RNU6-238P-201ENST00000363313 CLCN6P51797 869 aa10.48□□□□□ -0.73
RNU6-238P-201ENST00000363313 GABBR2O75899 941 aa10.47□□□□□ -0.73
RNU6-238P-201ENST00000363313 CHADLQ6NUI6 762 aa10.44□□□□□ -0.74
RNU6-238P-201ENST00000363313 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
RNU6-238P-201ENST00000363313 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
RNU6-238P-201ENST00000363313 STAG3Q9UJ98 1225 aa10.37□□□□□ -0.75
RNU6-238P-201ENST00000363313 CD44P16070 742 aaKnown RBP10.34□□□□□ -0.75
RNU6-238P-201ENST00000363313 LHX8Q68G74 356 aa10.31□□□□□ -0.76
RNU6-238P-201ENST00000363313 ZNF579Q8NAF0 562 aaKnown RBP10.23□□□□□ -0.77
RNU6-238P-201ENST00000363313 CREBZFQ9NS37 354 aa10.21□□□□□ -0.77
RNU6-238P-201ENST00000363313 SPDYE4A6NLX3 237 aa10.2□□□□□ -0.78
RNU6-238P-201ENST00000363313 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
RNU6-238P-201ENST00000363313 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
RNU6-238P-201ENST00000363313 ZRANB1Q9UGI0 708 aa10.16□□□□□ -0.78
RNU6-238P-201ENST00000363313 PAK3O75914 559 aaPredicted RBP10.12□□□□□ -0.79
RNU6-238P-201ENST00000363313 NPM1P06748 294 aaKnown RBP eCLIP10.12□□□□□ -0.79
RNU6-238P-201ENST00000363313 EHMT2Q96KQ7 1210 aa10.1□□□□□ -0.79
RNU6-238P-201ENST00000363313 MNX1P50219 401 aaPredicted RBP10.03□□□□□ -0.8
RNU6-238P-201ENST00000363313 GALR2O43603 387 aaPredicted RBP10.02□□□□□ -0.81
RNU6-238P-201ENST00000363313 PROM2Q8N271 834 aa10□□□□□ -0.81
RNU6-238P-201ENST00000363313 PHF12Q96QT6 1004 aa9.94□□□□□ -0.82
RNU6-238P-201ENST00000363313 ASTLQ6HA08 431 aaPredicted RBP9.9□□□□□ -0.82
RNU6-238P-201ENST00000363313 OTUD5Q96G74 571 aa9.88□□□□□ -0.83
RNU6-238P-201ENST00000363313 C7P10643 843 aa9.87□□□□□ -0.83
RNU6-238P-201ENST00000363313 PLEKHG5O94827 1062 aa9.86□□□□□ -0.83
RNU6-238P-201ENST00000363313 SLC39A7Q92504 469 aa9.86□□□□□ -0.83
RNU6-238P-201ENST00000363313 POTEB2H3BUK9 544 aa9.83□□□□□ -0.84
RNU6-238P-201ENST00000363313 ATMINO43313 823 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms