RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 IGHV5-51A0A0C4DH38 117 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 SH2D7A6NKC9 451 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-202ENST00000261517 DXOO77932 396 aaKnown RBP3.83□□□□□ -1.8
VPS13C-202ENST00000261517 RPS16P62249 146 aaKnown RBP3.83□□□□□ -1.8
VPS13C-202ENST00000261517 SELENOTP62341 195 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 KCNAB1Q14722 419 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 SLC25A26Q70HW3 274 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 LILRA3Q8N6C8 439 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-202ENST00000261517 R3HDMLQ9H3Y0 253 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 FBXO34Q9NWN3 711 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 PSENENQ9NZ42 101 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 INHBBP09529 407 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 SPCS3P61009 180 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 SERF2P84101 59 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 CACNA1DQ01668 2161 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM65Q6PI78 240 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-202ENST00000261517 SSX3Q99909 188 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 UQCC1Q9NVA1 299 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 LSM2Q9Y333 95 aaKnown RBP3.83□□□□□ -1.8
VPS13C-202ENST00000261517 SMIM30A4D0T7 59 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 PPM1DO15297 605 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 CTAG2O75638 210 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 GAPDHP04406 335 aaKnown RBP3.83□□□□□ -1.8
VPS13C-202ENST00000261517 GRPP07492 148 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 MYOGP15173 224 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 PGGT1BP53609 377 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 INSM1Q01101 510 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-202ENST00000261517 PRR18Q8N4B5 295 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 FGF11Q92914 225 aa3.83□□□□□ -1.8
VPS13C-202ENST00000261517 COL4A1P02462 1669 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 PCNX2A6NKB5 2137 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 CDX4O14627 284 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 RGS13O14921 159 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 SMIM17P0DL12 118 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 MEOX2P50222 304 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OR5D18Q8NGL1 313 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 PURGQ9UJV8 347 aaKnown RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 ANGPTL7O43827 346 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 CDC14BO60729 498 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 CLN5O75503 358 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 AKR1C3P42330 323 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 HABP2Q14520 560 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 PTDSS2Q9BVG9 487 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 DENND4CQ5VZ89 1909 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 A0A0A6YYJ9 748 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OR6C68A6NDL8 312 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OIP5O43482 229 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 FAM87AP0C7U9 286 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 CD37P11049 281 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 SLC2A1P11166 492 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 FCN2Q15485 313 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 HES3Q5TGS1 186 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 LCN10Q6JVE6 187 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 GUSBP11Q6P575 273 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 C12orf49Q9H741 205 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 SERGEFQ9UGK8 458 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 SLC31A2O15432 143 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OPN1MWP04001 364 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OPN1MW2P0DN77 364 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OPN1MW3P0DN78 364 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 CD96P40200 585 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 BBS1Q8NFJ9 593 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OR5R1Q8NH85 324 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 FRZBQ92765 325 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 NXF2Q9GZY0 626 aaKnown RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF665Q9H7R5 613 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 SERTAD4Q9NUC0 356 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 FREM3P0C091 2139 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 ANKRD20A5PA0PJZ0 165 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 H7C1C5 153 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 BGLAPP02818 100 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 ERVFRD-1P60508 538 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 LBHQ53QV2 105 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 DCAF10Q5QP82 559 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF787Q6DD87 383 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 HMGN2P46Q86SG4 172 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OR10Z1Q8NGY1 313 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 TSPAN32Q96QS1 320 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM272A0A1B0GTI8 110 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 TRAF3IP2O43734 574 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 CRYBA1P05813 215 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 HIST1H1EP10412 219 aaKnown RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 SLC25A4P12235 298 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 HES1Q14469 280 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 PHYHD1Q5SRE7 291 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OR4C16Q8NGL9 310 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OR2H1Q9GZK4 316 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 PCNX1Q96RV3 2341 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 FCMRO60667 390 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 PDGFAP04085 211 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 TNFAIP6P98066 277 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 AANATQ16613 207 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 KHDC3LQ587J8 217 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 PRSS54Q6PEW0 395 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 LYPD8Q6UX82 237 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 GPR32P1Q8NGA4 272 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OR10V1Q8NGI7 309 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 RPEQ96AT9 228 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 KTI12Q96EK9 354 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms