RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 HAGHQ16775 308 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 HFEQ30201 348 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 SPINK14Q6IE38 97 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 DCXRQ7Z4W1 244 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 SFTPA1Q8IWL2 248 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 PELI3Q8N2H9 469 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 ZNF680Q8NEM1 530 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 OR2Y1Q8NGV0 311 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 SAT2Q96F10 170 aaPredicted RBP5.66□□□□□ -1.5
PTPN3-202ENST00000374541 CMC2Q9NRP2 79 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 BET1LQ9NYM9 111 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 SERTM2A0A1B0GWG4 89 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 A0A1W2PPQ1 181 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 CLDN34H7C241 214 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 CLDN14O95500 239 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 CTSLP07711 333 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 HOXD4P09016 255 aaPredicted RBP5.66□□□□□ -1.5
PTPN3-202ENST00000374541 RAG2P55895 527 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 P2RX3P56373 397 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 SEMA3BQ13214 749 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 AFMIDQ63HM1 303 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 FAM71E1Q6IPT2 247 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 ABHD17CQ6PCB6 329 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 OR2AK2Q8NG84 335 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 OR52I2Q8NH67 350 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 AKR7LQ8NHP1 331 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 RAB1CQ92928 201 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 HGDQ93099 445 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 PHYHIPLQ96FC7 376 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 NPAS1Q99742 590 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 SLC2A9Q9NRM0 540 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 TIMM9Q9Y5J7 89 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 A0A1B0GTH9 108 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 FAM24AA6NFZ4 105 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 SERPINE3A8MV23 424 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 TARM1B6A8C7 271 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 TERTO14746 1132 aaKnown RBP5.66□□□□□ -1.5
PTPN3-202ENST00000374541 PHOX2AO14813 284 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 ZNF354AO60765 605 aaPredicted RBP5.66□□□□□ -1.5
PTPN3-202ENST00000374541 AREGP15514 252 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 MMP11P24347 488 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 DIO1P49895 249 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 ZNF718Q3SXZ3 478 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 TRNP1Q6NT89 227 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 TMEM81Q6P7N7 255 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 LCN15Q6UWW0 184 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 LILRA2Q8N149 483 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 RPUSD4Q96CM3 377 aaKnown RBP5.66□□□□□ -1.5
PTPN3-202ENST00000374541 RASD2Q96D21 266 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 GSX1Q9H4S2 264 aaPredicted RBP5.66□□□□□ -1.5
PTPN3-202ENST00000374541 SBF1O95248 1867 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 COL6A3P12111 3177 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 LOC102723971A0A1B0GUV8 181 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 RAB27BO00194 218 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 CLEC2LP0C7M8 214 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 CLDN15P56746 228 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 SCAND1P57086 179 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 ISL1P61371 349 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 SYT14P1Q58G82 188 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 ATP1A1-AS1Q5TC04 95 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 SAXO2Q658L1 398 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 DRAM2Q6UX65 266 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 TOMM20LQ6UXN7 152 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 ADIPOR1Q96A54 375 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 PSENENQ9NZ42 101 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 CTSFQ9UBX1 484 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 USP22Q9UPT9 525 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 A0A0C4DFX4 3053 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 CST4P01036 141 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 OR4E1P0C645 316 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 PTHLHP12272 177 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 OR5I1Q13606 314 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 LTC4SQ16873 150 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 PDZD11Q5EBL8 140 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 UNQ9370/PRO34162Q6UXP9 181 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 Q6ZNB5 142 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 VRK3Q8IV63 474 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 OR5D18Q8NGL1 313 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 HSD17B8Q92506 261 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 TEAD3Q99594 435 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 GNB4Q9HAV0 340 aa5.66□□□□□ -1.5
PTPN3-202ENST00000374541 MUC6Q6W4X9 2439 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 H0YIG0 161 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 TNRC18O15417 2968 aaPredicted RBP5.65□□□□□ -1.5
PTPN3-202ENST00000374541 COX7A2P2O60397 106 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 OR7C2O60412 319 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 EDN3P14138 238 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 NDUFB7P17568 137 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 TEAD1P28347 426 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 GPM6AP51674 278 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 OR2B8PP59922 312 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 TMEM268Q5VZI3 342 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 C16orf47Q6ZP98 133 aaPredicted RBP5.65□□□□□ -1.5
PTPN3-202ENST00000374541 TMEM229BQ8NBD8 167 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 PLPP7Q8NBV4 271 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 RELL2Q8NC24 303 aaPredicted RBP5.65□□□□□ -1.5
PTPN3-202ENST00000374541 OR51H1Q8NH63 302 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 RNF2Q99496 336 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 MED20Q9H944 212 aa5.65□□□□□ -1.5
PTPN3-202ENST00000374541 MMP26Q9NRE1 261 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms