RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A NOP4P37838 685 aaKnown RBP16.63■□□□□ 0.25
TRN1tP(UGG)A RFS1P38234 210 aaKnown RBP16.63■□□□□ 0.25
TRN1tP(UGG)A SHE3P38272 425 aaKnown RBP16.63■□□□□ 0.25
TRN1tP(UGG)A MCX1P38323 520 aaPredicted RBP16.63■□□□□ 0.25
TRN1tP(UGG)A HMT1P38074 348 aa16.62■□□□□ 0.25
TRN1tP(UGG)A MND1P53102 219 aa16.62■□□□□ 0.25
TRN1tP(UGG)A SYH1Q02875 849 aaKnown RBP16.62■□□□□ 0.25
TRN1tP(UGG)A SIL1Q08199 421 aa16.62■□□□□ 0.25
TRN1tP(UGG)A HXT1P32465 570 aa16.61■□□□□ 0.25
TRN1tP(UGG)A PEX2P32800 271 aa16.61■□□□□ 0.25
TRN1tP(UGG)A SLA2P33338 968 aa16.61■□□□□ 0.25
TRN1tP(UGG)A YEL075CP39972 122 aa16.61■□□□□ 0.25
TRN1tP(UGG)A DSE1P40077 573 aa16.61■□□□□ 0.25
TRN1tP(UGG)A FAF1P40546 346 aaPredicted RBP16.61■□□□□ 0.25
TRN1tP(UGG)A STU2P46675 888 aa16.61■□□□□ 0.25
TRN1tP(UGG)A NUT1P53114 1132 aa16.61■□□□□ 0.25
TRN1tP(UGG)A YGR111WP53265 400 aa16.61■□□□□ 0.25
TRN1tP(UGG)A HEH2Q03281 663 aa16.61■□□□□ 0.25
TRN1tP(UGG)A YMR018WQ04364 514 aa16.61■□□□□ 0.25
TRN1tP(UGG)A YDR222WQ04925 415 aa16.61■□□□□ 0.25
TRN1tP(UGG)A ESC2Q06340 456 aa16.61■□□□□ 0.25
TRN1tP(UGG)A TCD1P38756 429 aa16.6■□□□□ 0.25
TRN1tP(UGG)A PSY2P40164 858 aa16.6■□□□□ 0.25
TRN1tP(UGG)A YML083CQ04526 418 aa16.6■□□□□ 0.25
TRN1tP(UGG)A MRI1Q06489 411 aaKnown RBP16.6■□□□□ 0.25
TRN1tP(UGG)A TRE1Q08919 783 aa16.6■□□□□ 0.25
TRN1tP(UGG)A MRN1Q08925 612 aaKnown RBP RIP-Chip data16.6■□□□□ 0.25not detected
TRN1tP(UGG)A YMC2P38087 329 aa16.59■□□□□ 0.25
TRN1tP(UGG)A PCM1P38628 557 aaKnown RBP16.59■□□□□ 0.25
TRN1tP(UGG)A TDA3P38758 523 aa16.59■□□□□ 0.25
TRN1tP(UGG)A RPT2P40327 437 aaKnown RBP16.59■□□□□ 0.25
TRN1tP(UGG)A JJJ1P53863 590 aa16.59■□□□□ 0.25
TRN1tP(UGG)A ARO80Q04052 950 aa16.59■□□□□ 0.25
TRN1tP(UGG)A JIP3O13555 125 aa16.58■□□□□ 0.24
TRN1tP(UGG)A ERG11P10614 530 aa16.58■□□□□ 0.24
TRN1tP(UGG)A KGD2P19262 463 aaPredicted RBP16.58■□□□□ 0.24
TRN1tP(UGG)A LRE1P25579 583 aaKnown RBP16.58■□□□□ 0.24
TRN1tP(UGG)A NCL1P38205 684 aaKnown RBP16.58■□□□□ 0.24
TRN1tP(UGG)A ASG7P46993 209 aa16.58■□□□□ 0.24
TRN1tP(UGG)A PUS2P53167 370 aa16.58■□□□□ 0.24
TRN1tP(UGG)A HOP2P53187 214 aa16.58■□□□□ 0.24
TRN1tP(UGG)A TAF10Q12030 206 aa16.58■□□□□ 0.24
TRN1tP(UGG)A ATP1P07251 545 aaKnown RBP16.57■□□□□ 0.24
TRN1tP(UGG)A URK1P27515 501 aa16.57■□□□□ 0.24
TRN1tP(UGG)A SPT5P27692 1063 aaKnown RBP16.57■□□□□ 0.24
TRN1tP(UGG)A VPH1P32563 840 aaKnown RBP16.57■□□□□ 0.24
TRN1tP(UGG)A SRB4P32569 687 aa16.57■□□□□ 0.24
TRN1tP(UGG)A BCH2P36122 765 aa16.57■□□□□ 0.24
TRN1tP(UGG)A YBR284WP38150 797 aa16.57■□□□□ 0.24
TRN1tP(UGG)A YMR1P47147 688 aaKnown RBP RIP-Chip data16.57■□□□□ 0.24not detected
TRN1tP(UGG)A INP52P50942 1183 aa16.57■□□□□ 0.24
TRN1tP(UGG)A GYL1Q04322 720 aa16.57■□□□□ 0.24
TRN1tP(UGG)A VAC14Q06708 880 aa16.57■□□□□ 0.24
TRN1tP(UGG)A YOR059CQ08448 450 aaKnown RBP16.57■□□□□ 0.24
TRN1tP(UGG)A APM4Q99186 491 aa16.57■□□□□ 0.24
TRN1tP(UGG)A BI2P03873 423 aa16.56■□□□□ 0.24
TRN1tP(UGG)A BI4P03879 638 aa16.56■□□□□ 0.24
TRN1tP(UGG)A KAR3P17119 729 aa16.56■□□□□ 0.24
TRN1tP(UGG)A BLI1P35727 113 aa16.56■□□□□ 0.24
TRN1tP(UGG)A YBL036CP38197 257 aa16.56■□□□□ 0.24
TRN1tP(UGG)A QNS1P38795 714 aaKnown RBP16.56■□□□□ 0.24
TRN1tP(UGG)A YIR016WP40572 265 aa16.56■□□□□ 0.24
TRN1tP(UGG)A YNL011CP53980 444 aa16.56■□□□□ 0.24
TRN1tP(UGG)A PRM6Q04705 352 aa16.56■□□□□ 0.24
TRN1tP(UGG)A GPM2Q12008 311 aa16.56■□□□□ 0.24
TRN1tP(UGG)A VPS54Q12071 889 aa16.56■□□□□ 0.24
TRN1tP(UGG)A BI3Q9ZZW7 517 aa16.56■□□□□ 0.24
TRN1tP(UGG)A IDI1P15496 288 aa16.55■□□□□ 0.24
TRN1tP(UGG)A MRP4P32902 394 aa16.55■□□□□ 0.24
TRN1tP(UGG)A TKL2P33315 681 aa16.55■□□□□ 0.24
TRN1tP(UGG)A HIS2P38635 335 aa16.55■□□□□ 0.24
TRN1tP(UGG)A ADA2Q02336 434 aa16.55■□□□□ 0.24
TRN1tP(UGG)A MDM38Q08179 573 aa16.55■□□□□ 0.24
TRN1tP(UGG)A MAS1P10507 462 aa16.54■□□□□ 0.24
TRN1tP(UGG)A CKI1P20485 582 aa16.54■□□□□ 0.24
TRN1tP(UGG)A APM2P38700 605 aa16.54■□□□□ 0.24
TRN1tP(UGG)A KAP114P53067 1004 aa16.54■□□□□ 0.24
TRN1tP(UGG)A BOP3P53958 396 aa16.54■□□□□ 0.24
TRN1tP(UGG)A DIG1Q03063 452 aaKnown RBP16.54■□□□□ 0.24
TRN1tP(UGG)A SPO71Q03868 1245 aa16.54■□□□□ 0.24
TRN1tP(UGG)A HRT3Q12347 344 aa16.54■□□□□ 0.24
TRN1tP(UGG)A EMP46Q12396 444 aa16.54■□□□□ 0.24
TRN1tP(UGG)A MMF1P40185 145 aaKnown RBP16.53■□□□□ 0.24
TRN1tP(UGG)A TGL3P40308 642 aa16.53■□□□□ 0.24
TRN1tP(UGG)A BTN2P53286 410 aa16.53■□□□□ 0.24
TRN1tP(UGG)A SML1Q04964 104 aa16.53■□□□□ 0.24
TRN1tP(UGG)A LEA1Q08963 238 aaPredicted RBP16.53■□□□□ 0.24
TRN1tP(UGG)A YBR056WP38081 501 aa16.52■□□□□ 0.24
TRN1tP(UGG)A SPC72P39723 622 aa16.52■□□□□ 0.24
TRN1tP(UGG)A TAF1P46677 1066 aa16.52■□□□□ 0.24
TRN1tP(UGG)A PFD1P46988 109 aa16.52■□□□□ 0.24
TRN1tP(UGG)A NGL3Q03210 505 aa16.52■□□□□ 0.24
TRN1tP(UGG)A DIS3Q08162 1001 aaKnown RBP16.52■□□□□ 0.24
TRN1tP(UGG)A MNL2Q12205 849 aa16.52■□□□□ 0.24
TRN1tP(UGG)A MCM16Q12262 181 aa16.52■□□□□ 0.24
TRN1tP(UGG)A POL3P15436 1097 aa16.51■□□□□ 0.23
TRN1tP(UGG)A RAD27P26793 382 aa16.51■□□□□ 0.23
TRN1tP(UGG)A ABZ1P37254 787 aaPredicted RBP16.51■□□□□ 0.23
TRN1tP(UGG)A RGD1P38339 666 aa16.51■□□□□ 0.23
TRN1tP(UGG)A BRO1P48582 844 aa16.51■□□□□ 0.23
Retrieved 100 of 5,963 RNA–protein pairs in 362 ms