RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeast

Gene snR19, Length 568 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR19	snR19	MTC2	P34246	357 aa		5.69	□□□□□ -1.5
snR19	snR19	PFF1	P38244	976 aa		5.69	□□□□□ -1.5
snR19	snR19	LRS4	Q04087	347 aa	Known RBP	5.69	□□□□□ -1.5
snR19	snR19	YLR224W	Q05947	369 aa		5.69	□□□□□ -1.5
snR19	snR19	UPC2	Q12151	913 aa		5.69	□□□□□ -1.5
snR19	snR19	CDC9	P04819	755 aa		5.68	□□□□□ -1.5
snR19	snR19	PER1	P25625	357 aa		5.68	□□□□□ -1.5
snR19	snR19	BRN1	P38170	754 aa		5.68	□□□□□ -1.5
snR19	snR19	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
snR19	snR19	NCS6	P53088	359 aa		5.68	□□□□□ -1.5
snR19	snR19	PUS2	P53167	370 aa		5.68	□□□□□ -1.5
snR19	snR19	YBP2	P53169	641 aa		5.68	□□□□□ -1.5
snR19	snR19	NOP14	Q99207	810 aa	Known RBP	5.68	□□□□□ -1.5
snR19	snR19	UTP10	P42945	1769 aa	Known RBP	5.67	□□□□□ -1.5
snR19	snR19	STE14	P32584	239 aa		5.67	□□□□□ -1.5
snR19	snR19	PRS1	P32895	427 aa	Known RBP	5.67	□□□□□ -1.5
snR19	snR19	SPC42	P36094	363 aa		5.67	□□□□□ -1.5
snR19	snR19	MAL31	P38156	614 aa		5.67	□□□□□ -1.5
snR19	snR19	SHC1	P39000	512 aa		5.67	□□□□□ -1.5
snR19	snR19	PLB1	P39105	664 aa		5.67	□□□□□ -1.5
snR19	snR19	UBP5	P39944	805 aa		5.67	□□□□□ -1.5
snR19	snR19	SDP1	P40479	209 aa		5.67	□□□□□ -1.5
snR19	snR19	HXT16	P47185	567 aa		5.67	□□□□□ -1.5
snR19	snR19	UTP14	Q04500	899 aa	Known RBP	5.67	□□□□□ -1.5
snR19	snR19	YLR358C	O13565	187 aa		5.66	□□□□□ -1.5
snR19	snR19	SED4	P25365	1065 aa		5.66	□□□□□ -1.5
snR19	snR19	STO1	P34160	861 aa	Known RBP	5.66	□□□□□ -1.5
snR19	snR19	CTF8	P38877	133 aa		5.66	□□□□□ -1.5
snR19	snR19	IRC24	P40580	263 aa		5.66	□□□□□ -1.5
snR19	snR19	CAF16	P43569	289 aa		5.66	□□□□□ -1.5
snR19	snR19	IOC4	Q04213	475 aa		5.66	□□□□□ -1.5
snR19	snR19	HAL9	Q12180	1030 aa		5.66	□□□□□ -1.5
snR19	snR19	YOR022C	Q12204	715 aa		5.66	□□□□□ -1.5
snR19	snR19	YBR182C-A	Q8TGU6	64 aa		5.66	□□□□□ -1.5
snR19	snR19	PRC1	P00729	532 aa		5.65	□□□□□ -1.5
snR19	snR19	SRD1	P09007	221 aa		5.65	□□□□□ -1.5
snR19	snR19	YKU70	P32807	602 aa		5.65	□□□□□ -1.5
snR19	snR19	LST4	P34239	828 aa		5.65	□□□□□ -1.5
snR19	snR19	MCD4	P36051	919 aa		5.65	□□□□□ -1.5
snR19	snR19	SAP190	P36123	1033 aa		5.65	□□□□□ -1.5
snR19	snR19	RLP7	P40693	322 aa	Known RBP	5.65	□□□□□ -1.5
snR19	snR19	ALY2	P47029	1046 aa		5.65	□□□□□ -1.5
snR19	snR19	ZDS1	P50111	915 aa	Known RBP	5.65	□□□□□ -1.5
snR19	snR19	TFB2	Q02939	513 aa		5.65	□□□□□ -1.5
snR19	snR19	NPC2	Q12408	173 aa		5.65	□□□□□ -1.5
snR19	snR19	KCS1	Q12494	1050 aa		5.65	□□□□□ -1.5
snR19	snR19	SPC110	P32380	944 aa		5.64	□□□□□ -1.51
snR19	snR19	OPY1	P38271	328 aa		5.64	□□□□□ -1.51
snR19	snR19	SET5	P38890	526 aa	Known RBP	5.64	□□□□□ -1.51
snR19	snR19	ERO1	Q03103	563 aa		5.64	□□□□□ -1.51
snR19	snR19	THI21	Q08975	551 aa		5.64	□□□□□ -1.51
snR19	snR19	DIF1	O13577	133 aa		5.63	□□□□□ -1.51
snR19	snR19	LPD1	P09624	499 aa	Known RBP	5.63	□□□□□ -1.51
snR19	snR19	RPL8A	P17076	256 aa	Known RBP	5.63	□□□□□ -1.51
snR19	snR19	YHR078W	P38799	552 aa		5.63	□□□□□ -1.51
snR19	snR19	SHR5	P41912	237 aa		5.63	□□□□□ -1.51
snR19	snR19	DNM1	P54861	757 aa		5.63	□□□□□ -1.51
snR19	snR19	SNP1	Q00916	300 aa	Predicted RBP	5.63	□□□□□ -1.51
snR19	snR19	TMA10	Q06177	86 aa		5.63	□□□□□ -1.51
snR19	snR19	IRC3	Q06683	689 aa		5.63	□□□□□ -1.51
snR19	snR19	AUS1	Q08409	1394 aa		5.63	□□□□□ -1.51
snR19	snR19	RAD18	P10862	487 aa		5.62	□□□□□ -1.51
snR19	snR19	RNA1	P11745	407 aa	Known RBP	5.62	□□□□□ -1.51
snR19	snR19	STE11	P23561	717 aa		5.62	□□□□□ -1.51
snR19	snR19	SFP1	P32432	683 aa		5.62	□□□□□ -1.51
snR19	snR19	SER1	P33330	395 aa	Known RBP	5.62	□□□□□ -1.51
snR19	snR19	YEL1	P34225	687 aa		5.62	□□□□□ -1.51
snR19	snR19	YJR142W	P47173	342 aa		5.62	□□□□□ -1.51
snR19	snR19	YNL193W	P53870	558 aa		5.62	□□□□□ -1.51
snR19	snR19	CLU1	Q03690	1277 aa	Known RBP	5.62	□□□□□ -1.51
snR19	snR19	YLR001C	Q07895	862 aa		5.62	□□□□□ -1.51
snR19	snR19	FLR1	P38124	548 aa		5.61	□□□□□ -1.51
snR19	snR19	NUP145	P49687	1317 aa		5.61	□□□□□ -1.51
snR19	snR19	MNN10	P50108	393 aa	Known RBP	5.61	□□□□□ -1.51
snR19	snR19	EXG2	P52911	562 aa		5.61	□□□□□ -1.51
snR19	snR19	YDR338C	Q05497	695 aa		5.61	□□□□□ -1.51
snR19	snR19	GUP2	Q08929	609 aa		5.61	□□□□□ -1.51
snR19	snR19	ADR1	P07248	1323 aa		5.6	□□□□□ -1.51
snR19	snR19	PCL2	P25693	308 aa		5.6	□□□□□ -1.51
snR19	snR19	SEC21	P32074	935 aa	Known RBP	5.6	□□□□□ -1.51
snR19	snR19	HOG1	P32485	435 aa		5.6	□□□□□ -1.51
snR19	snR19	RPN10	P38886	268 aa	Known RBP	5.6	□□□□□ -1.51
snR19	snR19	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
snR19	snR19	PEA2	P40091	420 aa		5.6	□□□□□ -1.51
snR19	snR19	VPS4	P52917	437 aa		5.6	□□□□□ -1.51
snR19	snR19	MCM6	P53091	1017 aa	Known RBP	5.6	□□□□□ -1.51
snR19	snR19	PIL1	P53252	339 aa	Known RBP	5.6	□□□□□ -1.51
snR19	snR19	COG8	Q04632	607 aa		5.6	□□□□□ -1.51
snR19	snR19	HIM1	Q06674	414 aa		5.6	□□□□□ -1.51
snR19	snR19	YGR161W-C	Q3E744	92 aa		5.6	□□□□□ -1.51
snR19	snR19	MSM1	P22438	575 aa		5.59	□□□□□ -1.51
snR19	snR19	KAR4	P25583	335 aa		5.59	□□□□□ -1.51
snR19	snR19	FUN12	P39730	1002 aa	Known RBP	5.59	□□□□□ -1.51
snR19	snR19	SSY5	P47002	699 aa		5.59	□□□□□ -1.51
snR19	snR19	ZIP2	P53061	704 aa		5.59	□□□□□ -1.51
snR19	snR19	YGL082W	P53155	381 aa		5.59	□□□□□ -1.51
snR19	snR19	EAF7	P53911	425 aa	Known RBP	5.59	□□□□□ -1.51
snR19	snR19	YVH1	Q02256	364 aa	Known RBP	5.59	□□□□□ -1.51
snR19	snR19	TRM44	Q02648	567 aa	Known RBP	5.59	□□□□□ -1.51
snR19	snR19	SLU7	Q02775	382 aa	Known RBP	5.59	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms