RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	TAF6	P53040	516 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	TAM41	P53230	385 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	YNL144C	P53907	740 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	YNL040W	P53960	456 aa	Predicted RBP	7.24	□□□□□ -1.25
SNT309	YPR101W	RPA49	Q01080	415 aa	Predicted RBP	7.24	□□□□□ -1.25
SNT309	YPR101W	CUS1	Q02554	436 aa	Predicted RBP	7.24	□□□□□ -1.25
SNT309	YPR101W	MSH6	Q03834	1242 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	GTB1	Q04924	702 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	YLR326W	Q06170	240 aa	Known RBP	7.24	□□□□□ -1.25
SNT309	YPR101W	VHS3	Q08438	674 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	OSW1	Q08692	278 aa		7.24	□□□□□ -1.25
SNT309	YPR101W	TUB3	P09734	445 aa	Known RBP	7.23	□□□□□ -1.25
SNT309	YPR101W	RAD18	P10862	487 aa		7.23	□□□□□ -1.25
SNT309	YPR101W	GCD2	P12754	651 aa	Predicted RBP	7.23	□□□□□ -1.25
SNT309	YPR101W	SDH2	P21801	266 aa		7.23	□□□□□ -1.25
SNT309	YPR101W	DAL2	P25335	343 aa		7.23	□□□□□ -1.25
SNT309	YPR101W	ZUO1	P32527	433 aa	Known RBP	7.23	□□□□□ -1.25
SNT309	YPR101W	SSE1	P32589	693 aa	Known RBP	7.23	□□□□□ -1.25
SNT309	YPR101W	TOA1	P32773	286 aa		7.23	□□□□□ -1.25
SNT309	YPR101W	CSG2	P35206	410 aa		7.23	□□□□□ -1.25
SNT309	YPR101W	KEL1	P38853	1164 aa	Known RBP	7.23	□□□□□ -1.25
SNT309	YPR101W	REV7	P38927	245 aa		7.23	□□□□□ -1.25
SNT309	YPR101W	SEC26	P41810	973 aa	Known RBP	7.23	□□□□□ -1.25
SNT309	YPR101W	PHO86	P46956	311 aa		7.23	□□□□□ -1.25
SNT309	YPR101W	ERP6	P53198	216 aa		7.23	□□□□□ -1.25
SNT309	YPR101W	CRD1	Q07560	283 aa		7.23	□□□□□ -1.25
SNT309	YPR101W	ABP140	Q08641	628 aa	Known RBP	7.23	□□□□□ -1.25
SNT309	YPR101W	TY1B-A	O13527	1196 aa	Known RBP	7.22	□□□□□ -1.25
SNT309	YPR101W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.22	□□□□□ -1.25	not detected
SNT309	YPR101W	CLB4	P24871	460 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	SCJ1	P25303	377 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	KAR4	P25583	335 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	TPS2	P31688	896 aa	Known RBP	7.22	□□□□□ -1.25
SNT309	YPR101W	EFB1	P32471	206 aa	Known RBP	7.22	□□□□□ -1.25
SNT309	YPR101W	ABD1	P32783	436 aa	Predicted RBP	7.22	□□□□□ -1.25
SNT309	YPR101W	YME2	P32843	850 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	TGL1	P34163	548 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	7.22	□□□□□ -1.25	not detected
SNT309	YPR101W	ATG19	P35193	415 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	PPX1	P38698	397 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	DYS1	P38791	387 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	CPR7	P47103	393 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	YML6	P51998	286 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	HUL5	P53119	910 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	LSC1	P53598	329 aa	Known RBP	7.22	□□□□□ -1.25
SNT309	YPR101W	NOG2	P53742	486 aa	Known RBP	7.22	□□□□□ -1.25
SNT309	YPR101W	COG6	P53959	839 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	PTA1	Q01329	785 aa	Predicted RBP	7.22	□□□□□ -1.25
SNT309	YPR101W	KIN4	Q01919	800 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	PPM1	Q04081	328 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	IVY1	Q04934	453 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	SUB2	Q07478	446 aa	Known RBP	7.22	□□□□□ -1.25
SNT309	YPR101W	YPT6	Q99260	215 aa		7.22	□□□□□ -1.25
SNT309	YPR101W	AEP2	P22136	580 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	SPT5	P27692	1063 aa	Known RBP	7.21	□□□□□ -1.26
SNT309	YPR101W	COT1	P32798	439 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	TFC3	P34111	1160 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	SEG2	P34250	1132 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	MRX3	P38172	270 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	RFC3	P38629	340 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	ERC1	P38767	581 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	LIN1	P38852	340 aa	Predicted RBP	7.21	□□□□□ -1.26
SNT309	YPR101W	AIM21	P40563	679 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	ALA1	P40825	983 aa	Known RBP	7.21	□□□□□ -1.26
SNT309	YPR101W	RGD2	P43556	714 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	UBP6	P43593	499 aa	Known RBP	7.21	□□□□□ -1.26
SNT309	YPR101W	DAS1	P47005	663 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	LIA1	P47120	325 aa	Known RBP	7.21	□□□□□ -1.26
SNT309	YPR101W	HSH155	P49955	971 aa	Known RBP	7.21	□□□□□ -1.26
SNT309	YPR101W	INP52	P50942	1183 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	PCL10	P53124	433 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	KTR5	P53966	522 aa	Predicted RBP	7.21	□□□□□ -1.26
SNT309	YPR101W	SPO19	Q03029	223 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	YML037C	Q03703	340 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	SPH1	Q06160	661 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	RRD2	Q12461	358 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	AI5_BETA	Q9ZZX0	354 aa		7.21	□□□□□ -1.26
SNT309	YPR101W	CMD1	P06787	147 aa	Known RBP	7.2	□□□□□ -1.26
SNT309	YPR101W	KEX2	P13134	814 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	CDC42	P19073	191 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	RNR1	P21524	888 aa	Known RBP	7.2	□□□□□ -1.26
SNT309	YPR101W	REC107	P21651	314 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	MSM1	P22438	575 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	SIN4	P32259	974 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	STV1	P37296	890 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	DUG2	P38149	878 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	ERP5	P38819	212 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	FTR1	P40088	404 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	SAE2	P46946	345 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	HLJ1	P48353	224 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	LGE1	Q02796	332 aa	Known RBP	7.2	□□□□□ -1.26
SNT309	YPR101W	HFD1	Q04458	532 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	PRM6	Q04705	352 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	CDC73	Q06697	393 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	IWR1	Q07532	353 aa	Predicted RBP	7.2	□□□□□ -1.26
SNT309	YPR101W	MDM38	Q08179	573 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	SMC5	Q08204	1093 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	GIS3	Q12418	502 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	YEL077C	Q3E7X8	1277 aa		7.2	□□□□□ -1.26
SNT309	YPR101W	BI2	P03873	423 aa		7.19	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms