RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C SDA1P53313 767 aaKnown RBP4.32□□□□□ -1.72
RPA43YOR340C UME1Q03010 460 aa4.32□□□□□ -1.72
RPA43YOR340C PDS5Q04264 1277 aa4.32□□□□□ -1.72
RPA43YOR340C THI73Q07904 523 aa4.32□□□□□ -1.72
RPA43YOR340C NPC2Q12408 173 aa4.32□□□□□ -1.72
RPA43YOR340C PRC1P00729 532 aa4.31□□□□□ -1.72
RPA43YOR340C RAD18P10862 487 aa4.31□□□□□ -1.72
RPA43YOR340C PER1P25625 357 aa4.31□□□□□ -1.72
RPA43YOR340C CHA4P43634 648 aa4.31□□□□□ -1.72
RPA43YOR340C ATG36P46983 293 aa4.31□□□□□ -1.72
RPA43YOR340C TY4A-JP47023 414 aa4.31□□□□□ -1.72
RPA43YOR340C ATP25Q03153 612 aa4.31□□□□□ -1.72
RPA43YOR340C LRS4Q04087 347 aaKnown RBP4.31□□□□□ -1.72
RPA43YOR340C TAP42Q04372 366 aa4.31□□□□□ -1.72
RPA43YOR340C UPC2Q12151 913 aa4.31□□□□□ -1.72
RPA43YOR340C SIR4P11978 1358 aa4.3□□□□□ -1.72
RPA43YOR340C STE11P23561 717 aa4.3□□□□□ -1.72
RPA43YOR340C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
RPA43YOR340C YCL002CP25565 263 aa4.3□□□□□ -1.72
RPA43YOR340C CTS1P29029 562 aa4.3□□□□□ -1.72
RPA43YOR340C LST4P34239 828 aa4.3□□□□□ -1.72
RPA43YOR340C MTC2P34246 357 aa4.3□□□□□ -1.72
RPA43YOR340C MPT5P39016 859 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
RPA43YOR340C SDP1P40479 209 aa4.3□□□□□ -1.72
RPA43YOR340C SHR5P41912 237 aa4.3□□□□□ -1.72
RPA43YOR340C NCS6P53088 359 aa4.3□□□□□ -1.72
RPA43YOR340C MCM6P53091 1017 aaKnown RBP4.3□□□□□ -1.72
RPA43YOR340C ADE16P54113 591 aaKnown RBP4.3□□□□□ -1.72
RPA43YOR340C RSC3Q06639 885 aa4.3□□□□□ -1.72
RPA43YOR340C HAL9Q12180 1030 aa4.3□□□□□ -1.72
RPA43YOR340C YOR022CQ12204 715 aa4.3□□□□□ -1.72
RPA43YOR340C KCS1Q12494 1050 aa4.3□□□□□ -1.72
RPA43YOR340C SEC3P33332 1336 aaKnown RBP4.29□□□□□ -1.72
RPA43YOR340C MRC1P25588 1096 aa4.29□□□□□ -1.72
RPA43YOR340C PCL2P25693 308 aa4.29□□□□□ -1.72
RPA43YOR340C STO1P34160 861 aaKnown RBP4.29□□□□□ -1.72
RPA43YOR340C SET5P38890 526 aaKnown RBP4.29□□□□□ -1.72
RPA43YOR340C MGS1P40151 587 aa4.29□□□□□ -1.72
RPA43YOR340C ALY2P47029 1046 aa4.29□□□□□ -1.72
RPA43YOR340C MNN10P50108 393 aaKnown RBP4.29□□□□□ -1.72
RPA43YOR340C GPG1P53130 126 aa4.29□□□□□ -1.72
RPA43YOR340C RTS3P53289 263 aa4.29□□□□□ -1.72
RPA43YOR340C DUS1P53759 423 aaKnown RBP4.29□□□□□ -1.72
RPA43YOR340C FAP7Q12055 197 aaPredicted RBP4.29□□□□□ -1.72
RPA43YOR340C TMA17Q12513 150 aa4.29□□□□□ -1.72
RPA43YOR340C RPO41P13433 1351 aaKnown RBP4.28□□□□□ -1.72
RPA43YOR340C DIF1O13577 133 aa4.28□□□□□ -1.72
RPA43YOR340C FBP1P09201 348 aa4.28□□□□□ -1.72
RPA43YOR340C CAD1P24813 409 aaKnown RBP4.28□□□□□ -1.72
RPA43YOR340C YEL1P34225 687 aa4.28□□□□□ -1.72
RPA43YOR340C ENP1P38333 483 aaKnown RBP4.28□□□□□ -1.72
RPA43YOR340C YHR078WP38799 552 aa4.28□□□□□ -1.72
RPA43YOR340C CTF8P38877 133 aa4.28□□□□□ -1.72
RPA43YOR340C FOL1P53848 824 aa4.28□□□□□ -1.72
RPA43YOR340C TAD3Q9URQ3 322 aa4.28□□□□□ -1.72
RPA43YOR340C SFL1P20134 766 aa4.27□□□□□ -1.73
RPA43YOR340C STE14P32584 239 aa4.27□□□□□ -1.73
RPA43YOR340C MCD4P36051 919 aa4.27□□□□□ -1.73
RPA43YOR340C GRX7P38068 203 aa4.27□□□□□ -1.73
RPA43YOR340C RLP7P40693 322 aaKnown RBP4.27□□□□□ -1.73
RPA43YOR340C CAF16P43569 289 aa4.27□□□□□ -1.73
RPA43YOR340C MET13P53128 600 aa4.27□□□□□ -1.73
RPA43YOR340C SWM1Q12379 170 aa4.27□□□□□ -1.73
RPA43YOR340C HMG1P12683 1054 aa4.26□□□□□ -1.73
RPA43YOR340C RPN10P38886 268 aaKnown RBP4.26□□□□□ -1.73
RPA43YOR340C YJR096WP47137 282 aa4.26□□□□□ -1.73
RPA43YOR340C YJR120WP47157 116 aa4.26□□□□□ -1.73
RPA43YOR340C RRP46P53256 223 aaPredicted RBP4.26□□□□□ -1.73
RPA43YOR340C SNP1Q00916 300 aaPredicted RBP4.26□□□□□ -1.73
RPA43YOR340C MTQ2Q03920 221 aaPredicted RBP4.26□□□□□ -1.73
RPA43YOR340C CRR1Q05790 422 aa4.26□□□□□ -1.73
RPA43YOR340C YOL057WQ08225 711 aa4.26□□□□□ -1.73
RPA43YOR340C YBR182C-AQ8TGU6 64 aa4.26□□□□□ -1.73
RPA43YOR340C UTP10P42945 1769 aaKnown RBP4.26□□□□□ -1.73
RPA43YOR340C EDE1P34216 1381 aa4.26□□□□□ -1.73
RPA43YOR340C TUB2P02557 457 aaKnown RBP4.25□□□□□ -1.73
RPA43YOR340C OSM1P21375 501 aaKnown RBP4.25□□□□□ -1.73
RPA43YOR340C KAR4P25583 335 aa4.25□□□□□ -1.73
RPA43YOR340C SEC21P32074 935 aaKnown RBP4.25□□□□□ -1.73
RPA43YOR340C HOG1P32485 435 aa4.25□□□□□ -1.73
RPA43YOR340C PCM1P38628 557 aaKnown RBP4.25□□□□□ -1.73
RPA43YOR340C GPP1P41277 250 aaKnown RBP4.25□□□□□ -1.73
RPA43YOR340C EXG2P52911 562 aa4.25□□□□□ -1.73
RPA43YOR340C DSD1P53095 428 aa4.25□□□□□ -1.73
RPA43YOR340C COG8Q04632 607 aa4.25□□□□□ -1.73
RPA43YOR340C PEX19Q07418 342 aa4.25□□□□□ -1.73
RPA43YOR340C GUD1Q07729 489 aa4.25□□□□□ -1.73
RPA43YOR340C GUP2Q08929 609 aa4.25□□□□□ -1.73
RPA43YOR340C PFK1P16861 987 aaKnown RBP4.24□□□□□ -1.73
RPA43YOR340C HCM1P25364 564 aa4.24□□□□□ -1.73
RPA43YOR340C PRP19P32523 503 aaKnown RBP4.24□□□□□ -1.73
RPA43YOR340C PZF1P39933 429 aa4.24□□□□□ -1.73
RPA43YOR340C SSY5P47002 699 aa4.24□□□□□ -1.73
RPA43YOR340C HXT16P47185 567 aa4.24□□□□□ -1.73
RPA43YOR340C AIM14P53109 570 aa4.24□□□□□ -1.73
RPA43YOR340C PKH1Q03407 766 aa4.24□□□□□ -1.73
RPA43YOR340C HFD1Q04458 532 aa4.24□□□□□ -1.73
RPA43YOR340C ATG33Q06485 197 aa4.24□□□□□ -1.73
RPA43YOR340C ENB1Q08299 606 aa4.24□□□□□ -1.73
RPA43YOR340C THI21Q08975 551 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms