RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W DUN1P39009 513 aa3.81□□□□□ -1.8
SRL1YOR247W MEF2P39677 819 aa3.81□□□□□ -1.8
SRL1YOR247W PFA3P42836 336 aa3.81□□□□□ -1.8
SRL1YOR247W CHA4P43634 648 aa3.81□□□□□ -1.8
SRL1YOR247W GCV2P49095 1034 aa3.81□□□□□ -1.8
SRL1YOR247W PRP31P49704 494 aaPredicted RBP3.81□□□□□ -1.8
SRL1YOR247W EXG2P52911 562 aa3.81□□□□□ -1.8
SRL1YOR247W ASI2P53895 289 aa3.81□□□□□ -1.8
SRL1YOR247W REC102Q02721 264 aa3.81□□□□□ -1.8
SRL1YOR247W PLB2Q03674 706 aa3.81□□□□□ -1.8
SRL1YOR247W ECM38Q05902 660 aaPredicted RBP3.81□□□□□ -1.8
SRL1YOR247W CDA2Q06703 312 aa3.81□□□□□ -1.8
SRL1YOR247W NOP12Q08208 459 aaKnown RBP3.81□□□□□ -1.8
SRL1YOR247W VHS3Q08438 674 aa3.81□□□□□ -1.8
SRL1YOR247W YDL177CQ12257 170 aa3.81□□□□□ -1.8
SRL1YOR247W NKP1Q12493 238 aa3.81□□□□□ -1.8
SRL1YOR247W YLR415CO13578 112 aa3.8□□□□□ -1.8
SRL1YOR247W RPS17AP02407 136 aaKnown RBP3.8□□□□□ -1.8
SRL1YOR247W GLN4P13188 809 aaKnown RBP3.8□□□□□ -1.8
SRL1YOR247W RPS17BP14127 136 aaKnown RBP3.8□□□□□ -1.8
SRL1YOR247W PRP6P19735 899 aaPredicted RBP3.8□□□□□ -1.8
SRL1YOR247W STE14P32584 239 aa3.8□□□□□ -1.8
SRL1YOR247W TAF5P38129 798 aa3.8□□□□□ -1.8
SRL1YOR247W VID28P40547 921 aa3.8□□□□□ -1.8
SRL1YOR247W ASK10P48361 1146 aa3.8□□□□□ -1.8
SRL1YOR247W NCS6P53088 359 aa3.8□□□□□ -1.8
SRL1YOR247W RIM8P53179 542 aa3.8□□□□□ -1.8
SRL1YOR247W PEX19Q07418 342 aa3.8□□□□□ -1.8
SRL1YOR247W ISA1Q07821 250 aaPredicted RBP3.8□□□□□ -1.8
SRL1YOR247W NGL1Q08213 363 aaKnown RBP3.8□□□□□ -1.8
SRL1YOR247W HMI1Q12039 706 aa3.8□□□□□ -1.8
SRL1YOR247W CWC2Q12046 339 aaPredicted RBP3.8□□□□□ -1.8
SRL1YOR247W SOD2P00447 233 aa3.79□□□□□ -1.8
SRL1YOR247W PYC1P11154 1178 aaKnown RBP3.79□□□□□ -1.8
SRL1YOR247W ACO1P19414 778 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SRL1YOR247W ATP12P22135 325 aa3.79□□□□□ -1.8
SRL1YOR247W EMC1P25574 760 aa3.79□□□□□ -1.8
SRL1YOR247W MSH1P25846 959 aa3.79□□□□□ -1.8
SRL1YOR247W PET309P32522 965 aaPredicted RBP3.79□□□□□ -1.8
SRL1YOR247W PET127P32606 800 aa3.79□□□□□ -1.8
SRL1YOR247W YKL222CP35995 705 aa3.79□□□□□ -1.8
SRL1YOR247W APL2P36000 726 aaPredicted RBP3.79□□□□□ -1.8
SRL1YOR247W ECM1P39715 212 aa3.79□□□□□ -1.8
SRL1YOR247W STL1P39932 569 aa3.79□□□□□ -1.8
SRL1YOR247W ACA1P39970 489 aa3.79□□□□□ -1.8
SRL1YOR247W GID8P40208 455 aa3.79□□□□□ -1.8
SRL1YOR247W YIL092WP40497 633 aa3.79□□□□□ -1.8
SRL1YOR247W SAP185P40856 1058 aa3.79□□□□□ -1.8
SRL1YOR247W QRI7P43122 407 aa3.79□□□□□ -1.8
SRL1YOR247W VPS62P53285 467 aa3.79□□□□□ -1.8
SRL1YOR247W TEP1P53916 434 aa3.79□□□□□ -1.8
SRL1YOR247W ARG5,6Q01217 863 aa3.79□□□□□ -1.8
SRL1YOR247W PPN1Q04119 674 aa3.79□□□□□ -1.8
SRL1YOR247W TMA64Q04600 565 aaKnown RBP3.79□□□□□ -1.8
SRL1YOR247W MCM21Q06675 368 aa3.79□□□□□ -1.8
SRL1YOR247W ACK1Q07622 623 aaPredicted RBP3.79□□□□□ -1.8
SRL1YOR247W SGO1Q08490 590 aa3.79□□□□□ -1.8
SRL1YOR247W PSF3Q12146 194 aa3.79□□□□□ -1.8
SRL1YOR247W YOL114CQ12322 202 aa3.79□□□□□ -1.8
SRL1YOR247W KCS1Q12494 1050 aa3.79□□□□□ -1.8
SRL1YOR247W RPS13P05756 151 aaKnown RBP3.78□□□□□ -1.8
SRL1YOR247W MSS18P08593 268 aa3.78□□□□□ -1.8
SRL1YOR247W PHO3P24031 467 aa3.78□□□□□ -1.8
SRL1YOR247W PRP22P24384 1145 aaKnown RBP3.78□□□□□ -1.8
SRL1YOR247W IMG2P25642 146 aaPredicted RBP3.78□□□□□ -1.8
SRL1YOR247W DBF20P32328 564 aa3.78□□□□□ -1.8
SRL1YOR247W MF(ALPHA)2P32435 120 aa3.78□□□□□ -1.8
SRL1YOR247W KTR4P38131 464 aa3.78□□□□□ -1.8
SRL1YOR247W AIM3P38266 947 aaKnown RBP3.78□□□□□ -1.8
SRL1YOR247W SSP120P39931 234 aaKnown RBP3.78□□□□□ -1.8
SRL1YOR247W IES1P43579 692 aa3.78□□□□□ -1.8
SRL1YOR247W LEE1Q02799 301 aaKnown RBP3.78□□□□□ -1.8
SRL1YOR247W GCN5Q03330 439 aa3.78□□□□□ -1.8
SRL1YOR247W NSE5Q03718 556 aa3.78□□□□□ -1.8
SRL1YOR247W ASM4Q05166 528 aa3.78□□□□□ -1.8
SRL1YOR247W NUR1Q12066 484 aa3.78□□□□□ -1.8
SRL1YOR247W GPR1Q12361 961 aa3.78□□□□□ -1.8
SRL1YOR247W NPC2Q12408 173 aa3.78□□□□□ -1.8
SRL1YOR247W TRM11Q12463 433 aa3.78□□□□□ -1.8
SRL1YOR247W ERG20P08524 352 aaKnown RBP3.77□□□□□ -1.81
SRL1YOR247W TUB3P09734 445 aaKnown RBP3.77□□□□□ -1.81
SRL1YOR247W CDC26P14724 124 aa3.77□□□□□ -1.81
SRL1YOR247W FRS1P15624 595 aaKnown RBP3.77□□□□□ -1.81
SRL1YOR247W ADE2P21264 571 aaKnown RBP3.77□□□□□ -1.81
SRL1YOR247W SEC21P32074 935 aaKnown RBP3.77□□□□□ -1.81
SRL1YOR247W SSH4P32343 579 aa3.77□□□□□ -1.81
SRL1YOR247W HXT4P32467 576 aa3.77□□□□□ -1.81
SRL1YOR247W SIC1P38634 284 aa3.77□□□□□ -1.81
SRL1YOR247W RPP1P38786 293 aa3.77□□□□□ -1.81
SRL1YOR247W PPE1P38796 400 aa3.77□□□□□ -1.81
SRL1YOR247W MSS4P38994 779 aa3.77□□□□□ -1.81
SRL1YOR247W CCT3P39077 534 aaKnown RBP3.77□□□□□ -1.81
SRL1YOR247W PXA1P41909 870 aa3.77□□□□□ -1.81
SRL1YOR247W IRC5P43610 853 aa3.77□□□□□ -1.81
SRL1YOR247W COX18P53239 316 aa3.77□□□□□ -1.81
SRL1YOR247W MTD1Q02046 320 aaKnown RBP3.77□□□□□ -1.81
SRL1YOR247W NRG1Q03125 231 aa3.77□□□□□ -1.81
SRL1YOR247W VBA4Q04602 768 aaKnown RBP3.77□□□□□ -1.81
SRL1YOR247W DUS4Q06063 367 aa3.77□□□□□ -1.81
SRL1YOR247W OMS1Q06668 471 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 119 ms