RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C KTR5P53966 522 aaPredicted RBP7.79□□□□□ -1.16
RUP1YOR138C KIN4Q01919 800 aa7.79□□□□□ -1.16
RUP1YOR138C YLR326WQ06170 240 aaKnown RBP7.79□□□□□ -1.16
RUP1YOR138C YPT6Q99260 215 aa7.79□□□□□ -1.16
RUP1YOR138C KAR4P25583 335 aa7.78□□□□□ -1.16
RUP1YOR138C RFC3P38629 340 aa7.78□□□□□ -1.16
RUP1YOR138C RSM7P47150 247 aa7.78□□□□□ -1.16
RUP1YOR138C RNR4P49723 345 aaKnown RBP7.78□□□□□ -1.16
RUP1YOR138C PTA1Q01329 785 aaPredicted RBP7.78□□□□□ -1.16
RUP1YOR138C YML037CQ03703 340 aa7.78□□□□□ -1.16
RUP1YOR138C HFD1Q04458 532 aa7.78□□□□□ -1.16
RUP1YOR138C IVY1Q04934 453 aa7.78□□□□□ -1.16
RUP1YOR138C IWR1Q07532 353 aaPredicted RBP7.78□□□□□ -1.16
RUP1YOR138C RTP1Q12751 981 aa7.78□□□□□ -1.16
RUP1YOR138C RPL24AP04449 155 aaKnown RBP7.78□□□□□ -1.16
RUP1YOR138C RAD10P06838 210 aa7.78□□□□□ -1.16
RUP1YOR138C SFL1P20134 766 aa7.78□□□□□ -1.16
RUP1YOR138C RNR1P21524 888 aaKnown RBP7.78□□□□□ -1.16
RUP1YOR138C APM2P38700 605 aa7.78□□□□□ -1.16
RUP1YOR138C SMF2P38778 549 aa7.78□□□□□ -1.16
RUP1YOR138C SEC27P41811 889 aaKnown RBP7.78□□□□□ -1.16
RUP1YOR138C MDJ2P42834 146 aa7.78□□□□□ -1.16
RUP1YOR138C SUM1P46676 1062 aa7.78□□□□□ -1.16
RUP1YOR138C TAF1P46677 1066 aa7.78□□□□□ -1.16
RUP1YOR138C HOP2P53187 214 aa7.78□□□□□ -1.16
RUP1YOR138C UBP2Q01476 1272 aa7.78□□□□□ -1.16
RUP1YOR138C YLR053CQ12026 108 aa7.78□□□□□ -1.16
RUP1YOR138C CTT1P06115 562 aa7.77□□□□□ -1.17
RUP1YOR138C TUB3P09734 445 aaKnown RBP7.77□□□□□ -1.17
RUP1YOR138C MSM1P22438 575 aa7.77□□□□□ -1.17
RUP1YOR138C KIP2P28743 706 aa7.77□□□□□ -1.17
RUP1YOR138C HEM3P28789 327 aa7.77□□□□□ -1.17
RUP1YOR138C SIN4P32259 974 aa7.77□□□□□ -1.17
RUP1YOR138C SHP1P34223 423 aa7.77□□□□□ -1.17
RUP1YOR138C PCA1P38360 1216 aa7.77□□□□□ -1.17
RUP1YOR138C DYS1P38791 387 aa7.77□□□□□ -1.17
RUP1YOR138C TMN3P40071 706 aa7.77□□□□□ -1.17
RUP1YOR138C PHO86P46956 311 aa7.77□□□□□ -1.17
RUP1YOR138C GPN2Q08726 347 aaPredicted RBP7.77□□□□□ -1.17
RUP1YOR138C OCA6Q12454 224 aa7.77□□□□□ -1.17
RUP1YOR138C CBP1P07252 654 aa7.76□□□□□ -1.17
RUP1YOR138C SSC1P0CS90 654 aaKnown RBP7.76□□□□□ -1.17
RUP1YOR138C CDC24P11433 854 aaPredicted RBP7.76□□□□□ -1.17
RUP1YOR138C HPR1P17629 752 aaKnown RBP7.76□□□□□ -1.17
RUP1YOR138C GAP1P19145 602 aaPredicted RBP7.76□□□□□ -1.17
RUP1YOR138C TFC3P34111 1160 aa7.76□□□□□ -1.17
RUP1YOR138C GTT3P39996 337 aa7.76□□□□□ -1.17
RUP1YOR138C YER156CP40093 338 aaKnown RBP7.76□□□□□ -1.17
RUP1YOR138C KHA1P40309 873 aa7.76□□□□□ -1.17
RUP1YOR138C GVP36P40531 326 aaKnown RBP7.76□□□□□ -1.17
RUP1YOR138C STE20Q03497 939 aaKnown RBP7.76□□□□□ -1.17
RUP1YOR138C PRM6Q04705 352 aa7.76□□□□□ -1.17
RUP1YOR138C TDA5Q06417 326 aaKnown RBP7.76□□□□□ -1.17
RUP1YOR138C YDR018CQ12185 396 aa7.76□□□□□ -1.17
RUP1YOR138C PMC1P38929 1173 aaPredicted RBP7.76□□□□□ -1.17
RUP1YOR138C NPP2P39997 493 aa7.76□□□□□ -1.17
RUP1YOR138C LIA1P47120 325 aaKnown RBP7.76□□□□□ -1.17
RUP1YOR138C MCM6P53091 1017 aaKnown RBP7.76□□□□□ -1.17
RUP1YOR138C PPM1Q04081 328 aa7.76□□□□□ -1.17
RUP1YOR138C YKU80Q04437 629 aa7.76□□□□□ -1.17
RUP1YOR138C DUS3Q06053 668 aaKnown RBP7.76□□□□□ -1.17
RUP1YOR138C CDC73Q06697 393 aa7.76□□□□□ -1.17
RUP1YOR138C SMC5Q08204 1093 aa7.76□□□□□ -1.17
RUP1YOR138C AI5_BETAQ9ZZX0 354 aa7.76□□□□□ -1.17
RUP1YOR138C ADE3P07245 946 aaKnown RBP7.75□□□□□ -1.17
RUP1YOR138C SNT1P25357 1226 aa7.75□□□□□ -1.17
RUP1YOR138C SPS22P25380 463 aa7.75□□□□□ -1.17
RUP1YOR138C DPH5P32469 300 aaPredicted RBP7.75□□□□□ -1.17
RUP1YOR138C ABD1P32783 436 aaPredicted RBP7.75□□□□□ -1.17
RUP1YOR138C COT1P32798 439 aa7.75□□□□□ -1.17
RUP1YOR138C TGL1P34163 548 aa7.75□□□□□ -1.17
RUP1YOR138C COY1P34237 679 aa7.75□□□□□ -1.17
RUP1YOR138C SHC1P39000 512 aa7.75□□□□□ -1.17
RUP1YOR138C ALG5P40350 334 aa7.75□□□□□ -1.17
RUP1YOR138C PFK26P40433 827 aaKnown RBP7.75□□□□□ -1.17
RUP1YOR138C NIT1P40447 199 aa7.75□□□□□ -1.17
RUP1YOR138C ALY2P47029 1046 aa7.75□□□□□ -1.17
RUP1YOR138C ORC5P50874 479 aa7.75□□□□□ -1.17
RUP1YOR138C TPO2P53283 614 aa7.75□□□□□ -1.17
RUP1YOR138C RTT102P53330 157 aa7.75□□□□□ -1.17
RUP1YOR138C BI2P03873 423 aa7.74□□□□□ -1.17
RUP1YOR138C BI4P03879 638 aa7.74□□□□□ -1.17
RUP1YOR138C RPS3P05750 240 aaKnown RBP7.74□□□□□ -1.17
RUP1YOR138C CDC42P19073 191 aa7.74□□□□□ -1.17
RUP1YOR138C NPP1P25353 742 aa7.74□□□□□ -1.17
RUP1YOR138C RRT12P25381 491 aa7.74□□□□□ -1.17
RUP1YOR138C SIP5P40210 489 aaKnown RBP7.74□□□□□ -1.17
RUP1YOR138C HOS4P40480 1083 aa7.74□□□□□ -1.17
RUP1YOR138C UBP15P50101 1230 aa7.74□□□□□ -1.17
RUP1YOR138C USE1P53146 245 aa7.74□□□□□ -1.17
RUP1YOR138C BIO4P53630 237 aa7.74□□□□□ -1.17
RUP1YOR138C YDR090CQ03193 310 aa7.74□□□□□ -1.17
RUP1YOR138C SPH1Q06160 661 aa7.74□□□□□ -1.17
RUP1YOR138C RUP1Q12242 671 aa7.74□□□□□ -1.17
RUP1YOR138C TRM11Q12463 433 aa7.74□□□□□ -1.17
RUP1YOR138C ECM3Q99252 613 aa7.74□□□□□ -1.17
RUP1YOR138C BI3Q9ZZW7 517 aa7.74□□□□□ -1.17
RUP1YOR138C RRN3P36070 627 aa7.74□□□□□ -1.17
RUP1YOR138C COS6P53344 381 aa7.74□□□□□ -1.17
RUP1YOR138C ABP140Q08641 628 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms