RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP1YOR098C TY2B-LR1P0C2J3 1770 aa5.92□□□□□ -1.46
NUP1YOR098C TY2B-FP0CX63 1770 aa5.92□□□□□ -1.46
NUP1YOR098C TY2B-GR2P0CX64 1770 aa5.92□□□□□ -1.46
NUP1YOR098C TY2B-CP25384 1770 aa5.92□□□□□ -1.46
NUP1YOR098C TY2B-DR2Q03494 1770 aa5.92□□□□□ -1.46
NUP1YOR098C TY1B-DR1Q03855 1755 aa5.92□□□□□ -1.46
NUP1YOR098C TY2B-DR3Q07791 1770 aaKnown RBP5.92□□□□□ -1.46
NUP1YOR098C TY2B-OR1Q12113 1770 aa5.92□□□□□ -1.46
NUP1YOR098C TY2B-DR1Q12472 1770 aa5.92□□□□□ -1.46
NUP1YOR098C TY2B-OR2Q12501 1770 aa5.92□□□□□ -1.46
NUP1YOR098C MHP1P43638 1398 aa5.92□□□□□ -1.46
NUP1YOR098C NUC1P08466 329 aa5.91□□□□□ -1.46
NUP1YOR098C ERG3P32353 365 aa5.91□□□□□ -1.46
NUP1YOR098C AHP1P38013 176 aaKnown RBP5.91□□□□□ -1.46
NUP1YOR098C RPN10P38886 268 aaKnown RBP5.91□□□□□ -1.46
NUP1YOR098C NPR2P39923 615 aa5.91□□□□□ -1.46
NUP1YOR098C LSB6P42951 607 aa5.91□□□□□ -1.46
NUP1YOR098C YJL181WP46987 611 aa5.91□□□□□ -1.46
NUP1YOR098C CCM1P48237 864 aaPredicted RBP5.91□□□□□ -1.46
NUP1YOR098C EAF7P53911 425 aaKnown RBP5.91□□□□□ -1.46
NUP1YOR098C TIM11P81449 96 aaPredicted RBP5.91□□□□□ -1.46
NUP1YOR098C EAR1Q03212 550 aa5.91□□□□□ -1.46
NUP1YOR098C YLR257WQ06146 321 aaKnown RBP5.91□□□□□ -1.46
NUP1YOR098C GYP1Q08484 637 aa5.91□□□□□ -1.46
NUP1YOR098C MCH5Q08777 521 aa5.91□□□□□ -1.46
NUP1YOR098C HAL9Q12180 1030 aa5.91□□□□□ -1.46
NUP1YOR098C UBC1P21734 215 aaKnown RBP5.91□□□□□ -1.46
NUP1YOR098C YKL151CP36059 337 aa5.91□□□□□ -1.46
NUP1YOR098C YER156CP40093 338 aaKnown RBP5.91□□□□□ -1.46
NUP1YOR098C LTP1P40347 161 aa5.91□□□□□ -1.46
NUP1YOR098C LYS14P40971 790 aa5.91□□□□□ -1.46
NUP1YOR098C GUP1P53154 560 aa5.91□□□□□ -1.46
NUP1YOR098C YNR065CP53751 1116 aa5.91□□□□□ -1.46
NUP1YOR098C HRQ1Q05549 1077 aa5.91□□□□□ -1.46
NUP1YOR098C ADH4P10127 382 aa5.9□□□□□ -1.46
NUP1YOR098C RPT3P33298 428 aaKnown RBP5.9□□□□□ -1.46
NUP1YOR098C SPT23P35210 1082 aa5.9□□□□□ -1.46
NUP1YOR098C ALY2P47029 1046 aa5.9□□□□□ -1.46
NUP1YOR098C CUE5Q08412 411 aaKnown RBP5.9□□□□□ -1.46
NUP1YOR098C LEU2P04173 364 aaPredicted RBP5.9□□□□□ -1.47
NUP1YOR098C MET17P06106 444 aa5.9□□□□□ -1.47
NUP1YOR098C PUS4P48567 403 aaKnown RBP5.9□□□□□ -1.47
NUP1YOR098C CKA1P15790 372 aa5.89□□□□□ -1.47
NUP1YOR098C STE13P33894 931 aa5.89□□□□□ -1.47
NUP1YOR098C SCS2P40075 244 aaKnown RBP5.89□□□□□ -1.47
NUP1YOR098C INP51P40559 946 aaKnown RBP5.89□□□□□ -1.47
NUP1YOR098C PRP42Q03776 544 aaKnown RBP5.89□□□□□ -1.47
NUP1YOR098C YDR131CQ03899 556 aa5.89□□□□□ -1.47
NUP1YOR098C SGF29P25554 259 aa5.89□□□□□ -1.47
NUP1YOR098C TSL1P38427 1098 aaKnown RBP5.89□□□□□ -1.47
NUP1YOR098C MDE1P47095 244 aa5.89□□□□□ -1.47
NUP1YOR098C NIT3P49954 291 aa5.89□□□□□ -1.47
NUP1YOR098C PMS1P14242 873 aa5.89□□□□□ -1.47
NUP1YOR098C CYS3P31373 394 aaKnown RBP5.89□□□□□ -1.47
NUP1YOR098C FET4P40988 552 aa5.89□□□□□ -1.47
NUP1YOR098C SPO74P45819 413 aa5.89□□□□□ -1.47
NUP1YOR098C BIO5P53744 561 aaKnown RBP5.89□□□□□ -1.47
NUP1YOR098C HOT1Q03213 719 aa5.89□□□□□ -1.47
NUP1YOR098C YLR345WQ06137 509 aa5.89□□□□□ -1.47
NUP1YOR098C FUM1P08417 488 aaKnown RBP5.88□□□□□ -1.47
NUP1YOR098C OLE1P21147 510 aaKnown RBP5.88□□□□□ -1.47
NUP1YOR098C YKR051WP36142 418 aa5.88□□□□□ -1.47
NUP1YOR098C CIR1P42940 261 aa5.88□□□□□ -1.47
NUP1YOR098C YML082WQ04533 649 aaKnown RBP5.88□□□□□ -1.47
NUP1YOR098C TRX1P22217 103 aaKnown RBP5.88□□□□□ -1.47
NUP1YOR098C CBF2P32504 956 aa5.88□□□□□ -1.47
NUP1YOR098C CIT3P43635 486 aa5.88□□□□□ -1.47
NUP1YOR098C CTF18P49956 741 aa5.88□□□□□ -1.47
NUP1YOR098C NCS2P53923 493 aaPredicted RBP5.88□□□□□ -1.47
NUP1YOR098C ZDS2P54786 942 aa5.88□□□□□ -1.47
NUP1YOR098C SNO4Q04902 237 aa5.88□□□□□ -1.47
NUP1YOR098C HSP33Q08914 237 aaKnown RBP5.88□□□□□ -1.47
NUP1YOR098C HSP32Q08992 237 aa5.88□□□□□ -1.47
NUP1YOR098C LDB19Q12502 818 aa5.88□□□□□ -1.47
NUP1YOR098C STF1P01098 86 aa5.87□□□□□ -1.47
NUP1YOR098C NAM7P30771 971 aaKnown RBP5.87□□□□□ -1.47
NUP1YOR098C SWD1P39706 426 aa5.87□□□□□ -1.47
NUP1YOR098C SEC27P41811 889 aaKnown RBP5.87□□□□□ -1.47
NUP1YOR098C HSF1P10961 833 aa5.87□□□□□ -1.47
NUP1YOR098C PFK2P16862 959 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
NUP1YOR098C CBP3P21560 335 aa5.87□□□□□ -1.47
NUP1YOR098C YJL068CP40363 299 aa5.87□□□□□ -1.47
NUP1YOR098C LRS4Q04087 347 aaKnown RBP5.87□□□□□ -1.47
NUP1YOR098C REX3Q12090 404 aa5.87□□□□□ -1.47
NUP1YOR098C TY2B-BQ12491 1770 aa5.87□□□□□ -1.47
NUP1YOR098C ARG3P05150 338 aa5.87□□□□□ -1.47
NUP1YOR098C YCL002CP25565 263 aa5.87□□□□□ -1.47
NUP1YOR098C KIP1P28742 1111 aa5.87□□□□□ -1.47
NUP1YOR098C TGL1P34163 548 aa5.87□□□□□ -1.47
NUP1YOR098C PSF2P40359 213 aa5.87□□□□□ -1.47
NUP1YOR098C SAP4P53036 818 aa5.87□□□□□ -1.47
NUP1YOR098C MDM38Q08179 573 aa5.87□□□□□ -1.47
NUP1YOR098C SGT2Q12118 346 aaKnown RBP5.87□□□□□ -1.47
NUP1YOR098C CDC25P04821 1589 aa5.86□□□□□ -1.47
NUP1YOR098C GLN4P13188 809 aaKnown RBP5.86□□□□□ -1.47
NUP1YOR098C MNE1P24720 663 aa5.86□□□□□ -1.47
NUP1YOR098C HXT4P32467 576 aa5.86□□□□□ -1.47
NUP1YOR098C SDS22P36047 338 aa5.86□□□□□ -1.47
NUP1YOR098C SET3P36124 751 aa5.86□□□□□ -1.47
NUP1YOR098C YBR138CP38277 524 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms