RNA–Protein interactions for RNA: YNR050C

LYS9, Transcript of Saccharopine dehydrogenase (NADP+, L-glutamate-forming), yeast

Gene LYS9, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS9	YNR050C	SLK19	Q08581	821 aa	Known RBP	2.8	□□□□□ -1.96
LYS9	YNR050C	YPR071W	Q12346	211 aa		2.8	□□□□□ -1.96
LYS9	YNR050C	TOP2	P06786	1428 aa	Known RBP	2.8	□□□□□ -1.96
LYS9	YNR050C	PDR15	Q04182	1529 aa	Known RBP	2.79	□□□□□ -1.96
LYS9	YNR050C	NUP1	P20676	1076 aa		2.79	□□□□□ -1.96
LYS9	YNR050C	DAL7	P21826	554 aa		2.79	□□□□□ -1.96
LYS9	YNR050C	MBR1	P23493	339 aa		2.79	□□□□□ -1.96
LYS9	YNR050C	RPL8B	P29453	256 aa	Known RBP	2.79	□□□□□ -1.96
LYS9	YNR050C	YKL091C	P33324	310 aa	Known RBP	2.79	□□□□□ -1.96
LYS9	YNR050C	PHO11	P35842	467 aa		2.79	□□□□□ -1.96
LYS9	YNR050C	YBR184W	P38299	523 aa		2.79	□□□□□ -1.96
LYS9	YNR050C	PHO12	P38693	467 aa		2.79	□□□□□ -1.96
LYS9	YNR050C	NMD2	P38798	1089 aa	Known RBP	2.79	□□□□□ -1.96
LYS9	YNR050C	FMO1	P38866	432 aa		2.79	□□□□□ -1.96
LYS9	YNR050C	RSP5	P39940	809 aa	Known RBP	2.79	□□□□□ -1.96
LYS9	YNR050C	HUL4	P40985	892 aa		2.79	□□□□□ -1.96
LYS9	YNR050C	BUD6	P41697	788 aa		2.79	□□□□□ -1.96
LYS9	YNR050C	LRS4	Q04087	347 aa	Known RBP	2.79	□□□□□ -1.96
LYS9	YNR050C	EAF1	Q06337	982 aa		2.79	□□□□□ -1.96
LYS9	YNR050C	YDL124W	Q07551	312 aa	Known RBP	2.79	□□□□□ -1.96
LYS9	YNR050C	YLR125W	Q12138	136 aa		2.79	□□□□□ -1.96
LYS9	YNR050C	CIT1	P00890	479 aa		2.78	□□□□□ -1.96
LYS9	YNR050C	TOP3	P13099	656 aa		2.78	□□□□□ -1.96
LYS9	YNR050C	APN1	P22936	367 aa		2.78	□□□□□ -1.96
LYS9	YNR050C	SPC29	P33419	253 aa		2.78	□□□□□ -1.96
LYS9	YNR050C	SPP41	P38904	1435 aa		2.78	□□□□□ -1.96
LYS9	YNR050C	ECM1	P39715	212 aa		2.78	□□□□□ -1.96
LYS9	YNR050C	HUL5	P53119	910 aa		2.78	□□□□□ -1.96
LYS9	YNR050C	TAF8	Q03750	510 aa		2.78	□□□□□ -1.96
LYS9	YNR050C	GAD1	Q04792	585 aa		2.78	□□□□□ -1.96
LYS9	YNR050C	RSC3	Q06639	885 aa		2.78	□□□□□ -1.96
LYS9	YNR050C	TRM3	Q07527	1436 aa		2.78	□□□□□ -1.96
LYS9	YNR050C	FLC1	Q08967	793 aa		2.78	□□□□□ -1.96
LYS9	YNR050C	YRF1-1	P0CX20	1796 aa		2.77	□□□□□ -1.97
LYS9	YNR050C	YRF1-5	P0CX21	1796 aa		2.77	□□□□□ -1.97
LYS9	YNR050C	YRF1-8	P0CX22	1796 aa		2.77	□□□□□ -1.97
LYS9	YNR050C	TY1B-BR	Q12193	1756 aa		2.77	□□□□□ -1.97
LYS9	YNR050C	TY1B-GR3	Q12316	1755 aa		2.77	□□□□□ -1.97
LYS9	YNR050C	TY1B-OR	Q92393	1755 aa		2.77	□□□□□ -1.97
LYS9	YNR050C	PRC1	P00729	532 aa		2.77	□□□□□ -1.97
LYS9	YNR050C	ARE1	P25628	610 aa		2.77	□□□□□ -1.97
LYS9	YNR050C	CCR4	P31384	837 aa	Known RBP	2.77	□□□□□ -1.97
LYS9	YNR050C	YBR284W	P38150	797 aa		2.77	□□□□□ -1.97
LYS9	YNR050C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.77	□□□□□ -1.97	not detected
LYS9	YNR050C	FPR3	P38911	411 aa	Known RBP	2.77	□□□□□ -1.97
LYS9	YNR050C	ALR2	P43553	858 aa		2.77	□□□□□ -1.97
LYS9	YNR050C	YGR125W	P53273	1036 aa		2.77	□□□□□ -1.97
LYS9	YNR050C	SNT2	P53127	1403 aa		2.76	□□□□□ -1.97
LYS9	YNR050C	CAN1	P04817	590 aa		2.76	□□□□□ -1.97
LYS9	YNR050C	THR1	P17423	357 aa	Known RBP	2.76	□□□□□ -1.97
LYS9	YNR050C	FUB1	P25659	250 aa		2.76	□□□□□ -1.97
LYS9	YNR050C	MVD1	P32377	396 aa	Known RBP	2.76	□□□□□ -1.97
LYS9	YNR050C	PET10	P36139	283 aa		2.76	□□□□□ -1.97
LYS9	YNR050C	NUP60	P39705	539 aa		2.76	□□□□□ -1.97
LYS9	YNR050C	TAD1	P53065	400 aa		2.76	□□□□□ -1.97
LYS9	YNR050C	UTP14	Q04500	899 aa	Known RBP	2.76	□□□□□ -1.97
LYS9	YNR050C	POB3	Q04636	552 aa	Known RBP	2.76	□□□□□ -1.97
LYS9	YNR050C	MSD1	P15179	658 aa	Known RBP	2.75	□□□□□ -1.97
LYS9	YNR050C	SET3	P36124	751 aa		2.75	□□□□□ -1.97
LYS9	YNR050C	GMH1	P36125	273 aa		2.75	□□□□□ -1.97
LYS9	YNR050C	UBP6	P43593	499 aa	Known RBP	2.75	□□□□□ -1.97
LYS9	YNR050C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.75	□□□□□ -1.97	not detected
LYS9	YNR050C	FMP30	Q02883	468 aa		2.75	□□□□□ -1.97
LYS9	YNR050C	HFD1	Q04458	532 aa		2.75	□□□□□ -1.97
LYS9	YNR050C	TSC11	P40061	1430 aa		2.75	□□□□□ -1.97
LYS9	YNR050C	PHO8	P11491	566 aa		2.74	□□□□□ -1.97
LYS9	YNR050C	YMC2	P38087	329 aa		2.74	□□□□□ -1.97
LYS9	YNR050C	YHR112C	P38716	378 aa		2.74	□□□□□ -1.97
LYS9	YNR050C	MIT1	P40002	666 aa		2.74	□□□□□ -1.97
LYS9	YNR050C	TAX4	P47030	604 aa		2.74	□□□□□ -1.97
LYS9	YNR050C	MTR3	P48240	250 aa	Predicted RBP	2.74	□□□□□ -1.97
LYS9	YNR050C	STP1	Q00947	519 aa		2.74	□□□□□ -1.97
LYS9	YNR050C	USV1	Q12132	391 aa		2.74	□□□□□ -1.97
LYS9	YNR050C	HBN1	Q96VH4	193 aa		2.74	□□□□□ -1.97
LYS9	YNR050C	HRP1	Q99383	534 aa	Known RBP	2.74	□□□□□ -1.97
LYS9	YNR050C	PDR10	P51533	1564 aa		2.74	□□□□□ -1.97
LYS9	YNR050C	TOM70	P07213	617 aa	Known RBP	2.73	□□□□□ -1.97
LYS9	YNR050C	CIT2	P08679	460 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	RPA135	P22138	1203 aa	Known RBP	2.73	□□□□□ -1.97
LYS9	YNR050C	ERG6	P25087	383 aa	Known RBP	2.73	□□□□□ -1.97
LYS9	YNR050C	YMC1	P32331	307 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	TIM23	P32897	222 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	SET5	P38890	526 aa	Known RBP	2.73	□□□□□ -1.97
LYS9	YNR050C	NUP82	P40368	713 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	CCT5	P40413	562 aa	Known RBP	2.73	□□□□□ -1.97
LYS9	YNR050C	NIT3	P49954	291 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	ZIP2	P53061	704 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	UGO1	Q03327	502 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	UBX5	Q06682	500 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	TY2B-LR1	P0C2J3	1770 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	TY2B-F	P0CX63	1770 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	TY2B-GR2	P0CX64	1770 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	TY2B-C	P25384	1770 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	TY2B-DR2	Q03494	1770 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	TY1B-DR1	Q03855	1755 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	TY2B-DR3	Q07791	1770 aa	Known RBP	2.73	□□□□□ -1.97
LYS9	YNR050C	TY2B-OR1	Q12113	1770 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	TY2B-DR1	Q12472	1770 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	TY2B-OR2	Q12501	1770 aa		2.73	□□□□□ -1.97
LYS9	YNR050C	IQG1	Q12280	1495 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms