RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C TAF8Q03750 510 aa4.04□□□□□ -1.76
ATG3YNR007C YDR514CQ04408 483 aa4.04□□□□□ -1.76
ATG3YNR007C TGL5Q12043 749 aa4.04□□□□□ -1.76
ATG3YNR007C TOM70P07213 617 aaKnown RBP4.03□□□□□ -1.76
ATG3YNR007C KIN3P22209 435 aa4.03□□□□□ -1.76
ATG3YNR007C HIS7P33734 552 aaKnown RBP4.03□□□□□ -1.76
ATG3YNR007C YBR259WP38338 688 aa4.03□□□□□ -1.76
ATG3YNR007C TIM54P47045 478 aa4.03□□□□□ -1.76
ATG3YNR007C GPR1Q12361 961 aa4.03□□□□□ -1.76
ATG3YNR007C ILV6P25605 309 aaKnown RBP4.02□□□□□ -1.77
ATG3YNR007C PPZ2P33329 710 aa4.02□□□□□ -1.77
ATG3YNR007C BCD1P38772 366 aa4.02□□□□□ -1.77
ATG3YNR007C HOS4P40480 1083 aa4.02□□□□□ -1.77
ATG3YNR007C ALG2P43636 503 aa4.02□□□□□ -1.77
ATG3YNR007C MTR3P48240 250 aaPredicted RBP4.02□□□□□ -1.77
ATG3YNR007C ZDS1P50111 915 aaKnown RBP4.02□□□□□ -1.77
ATG3YNR007C TEL2P53038 688 aa4.02□□□□□ -1.77
ATG3YNR007C FPR4Q06205 392 aaPredicted RBP4.02□□□□□ -1.77
ATG3YNR007C FLC1Q08967 793 aa4.02□□□□□ -1.77
ATG3YNR007C YBR182C-AQ8TGU6 64 aa4.02□□□□□ -1.77
ATG3YNR007C NUP188P52593 1655 aaKnown RBP4.02□□□□□ -1.77
ATG3YNR007C IKI3Q06706 1349 aaKnown RBP4.01□□□□□ -1.77
ATG3YNR007C TUB1P09733 447 aaKnown RBP4.01□□□□□ -1.77
ATG3YNR007C PEX2P32800 271 aa4.01□□□□□ -1.77
ATG3YNR007C CBR1P38626 284 aaKnown RBP4.01□□□□□ -1.77
ATG3YNR007C YHR020WP38708 688 aaKnown RBP4.01□□□□□ -1.77
ATG3YNR007C YIL166CP40445 542 aa4.01□□□□□ -1.77
ATG3YNR007C RLP7P40693 322 aaKnown RBP4.01□□□□□ -1.77
ATG3YNR007C SNM1P40993 198 aa4.01□□□□□ -1.77
ATG3YNR007C SHR5P41912 237 aa4.01□□□□□ -1.77
ATG3YNR007C UBC11P52492 156 aa4.01□□□□□ -1.77
ATG3YNR007C ATP25Q03153 612 aa4.01□□□□□ -1.77
ATG3YNR007C ASM4Q05166 528 aa4.01□□□□□ -1.77
ATG3YNR007C MET7Q08645 548 aa4.01□□□□□ -1.77
ATG3YNR007C VMR1P38735 1592 aa4.01□□□□□ -1.77
ATG3YNR007C CFT1Q06632 1357 aaKnown RBP4.01□□□□□ -1.77
ATG3YNR007C MET6P05694 767 aaKnown RBP4□□□□□ -1.77
ATG3YNR007C DMC1P25453 334 aa4□□□□□ -1.77
ATG3YNR007C BET3P36149 193 aa4□□□□□ -1.77
ATG3YNR007C RIX1P38883 763 aaPredicted RBP4□□□□□ -1.77
ATG3YNR007C BAP3P41815 604 aa4□□□□□ -1.77
ATG3YNR007C ZIP2P53061 704 aa4□□□□□ -1.77
ATG3YNR007C YAP1802P53309 568 aa4□□□□□ -1.77
ATG3YNR007C YOL098CQ12496 1037 aa4□□□□□ -1.77
ATG3YNR007C IML1P47170 1584 aa3.99□□□□□ -1.77
ATG3YNR007C DIF1O13577 133 aa3.99□□□□□ -1.77
ATG3YNR007C PHR1P05066 565 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
ATG3YNR007C REV7P38927 245 aa3.99□□□□□ -1.77
ATG3YNR007C ECM1P39715 212 aa3.99□□□□□ -1.77
ATG3YNR007C IMO32P53219 342 aa3.99□□□□□ -1.77
ATG3YNR007C TEX1P53851 422 aaKnown RBP3.99□□□□□ -1.77
ATG3YNR007C SMX3P54999 86 aaPredicted RBP3.99□□□□□ -1.77
ATG3YNR007C GAD1Q04792 585 aa3.99□□□□□ -1.77
ATG3YNR007C COQ11Q05892 277 aa3.99□□□□□ -1.77
ATG3YNR007C HIR1P32479 840 aa3.98□□□□□ -1.77
ATG3YNR007C TYS1P36421 394 aaKnown RBP3.98□□□□□ -1.77
ATG3YNR007C HXT16P47185 567 aa3.98□□□□□ -1.77
ATG3YNR007C YBP2P53169 641 aa3.98□□□□□ -1.77
ATG3YNR007C PDR5P33302 1511 aaKnown RBP3.98□□□□□ -1.77
ATG3YNR007C CAN1P04817 590 aa3.97□□□□□ -1.77
ATG3YNR007C STI1P15705 589 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
ATG3YNR007C SPC29P33419 253 aa3.97□□□□□ -1.77
ATG3YNR007C CCT3P39077 534 aaKnown RBP3.97□□□□□ -1.77
ATG3YNR007C YJL206CP39529 758 aa3.97□□□□□ -1.77
ATG3YNR007C RSP5P39940 809 aaKnown RBP3.97□□□□□ -1.77
ATG3YNR007C ARO10Q06408 635 aa3.97□□□□□ -1.77
ATG3YNR007C TAF3Q12297 353 aa3.97□□□□□ -1.77
ATG3YNR007C YNL162W-AQ3E7A8 72 aa3.97□□□□□ -1.77
ATG3YNR007C SIR3P06701 978 aa3.96□□□□□ -1.78
ATG3YNR007C ADY2P25613 283 aa3.96□□□□□ -1.78
ATG3YNR007C FLO10P36170 1169 aa3.96□□□□□ -1.78
ATG3YNR007C RTA1P53047 317 aa3.96□□□□□ -1.78
ATG3YNR007C HUL5P53119 910 aa3.96□□□□□ -1.78
ATG3YNR007C NSE3Q05541 303 aa3.96□□□□□ -1.78
ATG3YNR007C PYC1P11154 1178 aaKnown RBP3.95□□□□□ -1.78
ATG3YNR007C NDC80P40460 691 aa3.95□□□□□ -1.78
ATG3YNR007C OSW7P43611 510 aa3.95□□□□□ -1.78
ATG3YNR007C TY4A-JP47023 414 aa3.95□□□□□ -1.78
ATG3YNR007C ALY2P47029 1046 aa3.95□□□□□ -1.78
ATG3YNR007C PRP31P49704 494 aaPredicted RBP3.95□□□□□ -1.78
ATG3YNR007C APM1Q00776 475 aaPredicted RBP3.95□□□□□ -1.78
ATG3YNR007C YKL033W-AQ86ZR7 236 aa3.95□□□□□ -1.78
ATG3YNR007C GCN2P15442 1659 aa3.94□□□□□ -1.78
ATG3YNR007C GAL11P19659 1081 aa3.94□□□□□ -1.78
ATG3YNR007C PER1P25625 357 aa3.94□□□□□ -1.78
ATG3YNR007C SRP40P32583 406 aaPredicted RBP3.94□□□□□ -1.78
ATG3YNR007C CCT7P42943 550 aaKnown RBP3.94□□□□□ -1.78
ATG3YNR007C CTK1Q03957 528 aaKnown RBP3.94□□□□□ -1.78
ATG3YNR007C HOF1Q05080 669 aa3.94□□□□□ -1.78
ATG3YNR007C YOR131CQ12486 218 aa3.94□□□□□ -1.78
ATG3YNR007C SPO11P23179 398 aa3.93□□□□□ -1.78
ATG3YNR007C APL2P36000 726 aaPredicted RBP3.93□□□□□ -1.78
ATG3YNR007C GLG1P36143 616 aa3.93□□□□□ -1.78
ATG3YNR007C ARG2P40360 574 aa3.93□□□□□ -1.78
ATG3YNR007C CTR1P49573 406 aa3.93□□□□□ -1.78
ATG3YNR007C PAN2P53010 1115 aaPredicted RBP3.93□□□□□ -1.78
ATG3YNR007C YNR029CP53729 429 aaKnown RBP3.93□□□□□ -1.78
ATG3YNR007C RPN4Q03465 531 aa3.93□□□□□ -1.78
ATG3YNR007C YDR338CQ05497 695 aa3.93□□□□□ -1.78
ATG3YNR007C CDC53Q12018 815 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms