RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C YFL034WP43564 1073 aa5.18□□□□□ -1.58
NUP116YMR047C ACF4P47129 309 aa5.18□□□□□ -1.58
NUP116YMR047C YPT11P48559 417 aa5.18□□□□□ -1.58
NUP116YMR047C YNL247WP53852 767 aaKnown RBP5.18□□□□□ -1.58
NUP116YMR047C HRQ1Q05549 1077 aa5.18□□□□□ -1.58
NUP116YMR047C CSR1Q06705 408 aaKnown RBP5.18□□□□□ -1.58
NUP116YMR047C NOC3Q07896 663 aaPredicted RBP5.18□□□□□ -1.58
NUP116YMR047C APM4Q99186 491 aa5.18□□□□□ -1.58
NUP116YMR047C APE1P14904 514 aa5.18□□□□□ -1.58
NUP116YMR047C IMG2P25642 146 aaPredicted RBP5.18□□□□□ -1.58
NUP116YMR047C RAD27P26793 382 aa5.18□□□□□ -1.58
NUP116YMR047C YME2P32843 850 aa5.18□□□□□ -1.58
NUP116YMR047C MUM2P38236 366 aa5.18□□□□□ -1.58
NUP116YMR047C RTT107P38850 1070 aa5.18□□□□□ -1.58
NUP116YMR047C UBP5P39944 805 aa5.18□□□□□ -1.58
NUP116YMR047C TUB4P53378 473 aa5.18□□□□□ -1.58
NUP116YMR047C RSM28Q03430 361 aa5.18□□□□□ -1.58
NUP116YMR047C HCR1Q05775 265 aaKnown RBP5.18□□□□□ -1.58
NUP116YMR047C FLC1Q08967 793 aa5.18□□□□□ -1.58
NUP116YMR047C SFI1Q12369 946 aa5.18□□□□□ -1.58
NUP116YMR047C RRD2Q12461 358 aa5.18□□□□□ -1.58
NUP116YMR047C SEC14P24280 304 aaKnown RBP5.18□□□□□ -1.58
NUP116YMR047C CDC3P32457 520 aaKnown RBP5.18□□□□□ -1.58
NUP116YMR047C SLA2P33338 968 aa5.18□□□□□ -1.58
NUP116YMR047C CCL1P37366 393 aa5.18□□□□□ -1.58
NUP116YMR047C TBS1P38114 1094 aa5.18□□□□□ -1.58
NUP116YMR047C RAD55P38953 406 aa5.18□□□□□ -1.58
NUP116YMR047C RIC1P40395 1056 aa5.18□□□□□ -1.58
NUP116YMR047C ATH1P48016 1211 aa5.18□□□□□ -1.58
NUP116YMR047C GUP1P53154 560 aa5.18□□□□□ -1.58
NUP116YMR047C ADE12P80210 433 aaKnown RBP5.18□□□□□ -1.58
NUP116YMR047C TIF35Q04067 274 aaKnown RBP5.18□□□□□ -1.58
NUP116YMR047C SSQ1Q05931 657 aaPredicted RBP5.18□□□□□ -1.58
NUP116YMR047C BUD14P27637 709 aa5.17□□□□□ -1.58
NUP116YMR047C PIH1P38768 344 aa5.17□□□□□ -1.58
NUP116YMR047C PEX28P38848 579 aa5.17□□□□□ -1.58
NUP116YMR047C SAP1P39955 897 aaKnown RBP5.17□□□□□ -1.58
NUP116YMR047C KAP123P40069 1113 aaKnown RBP5.17□□□□□ -1.58
NUP116YMR047C POL31P46957 487 aa5.17□□□□□ -1.58
NUP116YMR047C VPS25P47142 202 aa5.17□□□□□ -1.58
NUP116YMR047C COS5P47187 383 aa5.17□□□□□ -1.58
NUP116YMR047C SRB7P47822 140 aa5.17□□□□□ -1.58
NUP116YMR047C RPA49Q01080 415 aaPredicted RBP5.17□□□□□ -1.58
NUP116YMR047C ADY4Q05955 493 aa5.17□□□□□ -1.58
NUP116YMR047C VMA4P22203 233 aaKnown RBP5.17□□□□□ -1.58
NUP116YMR047C CSE1P33307 960 aa5.17□□□□□ -1.58
NUP116YMR047C RDH54P38086 958 aa5.17□□□□□ -1.58
NUP116YMR047C YMC2P38087 329 aa5.17□□□□□ -1.58
NUP116YMR047C RTT105P40063 208 aa5.17□□□□□ -1.58
NUP116YMR047C YJR142WP47173 342 aa5.17□□□□□ -1.58
NUP116YMR047C NUT1P53114 1132 aa5.17□□□□□ -1.58
NUP116YMR047C SVF1Q05515 481 aa5.17□□□□□ -1.58
NUP116YMR047C YLH47Q06493 454 aa5.17□□□□□ -1.58
NUP116YMR047C YDL121CQ07541 149 aa5.17□□□□□ -1.58
NUP116YMR047C ESC8Q08119 714 aa5.17□□□□□ -1.58
NUP116YMR047C IOC2Q12072 812 aa5.17□□□□□ -1.58
NUP116YMR047C BIK1P11709 440 aa5.17□□□□□ -1.58
NUP116YMR047C CDC48P25694 835 aaKnown RBP5.17□□□□□ -1.58
NUP116YMR047C SDS3P40505 327 aa5.17□□□□□ -1.58
NUP116YMR047C SET2P46995 733 aaKnown RBP5.17□□□□□ -1.58
NUP116YMR047C STP1Q00947 519 aa5.17□□□□□ -1.58
NUP116YMR047C RCR2Q03446 210 aaKnown RBP5.17□□□□□ -1.58
NUP116YMR047C YDL057WQ07379 328 aa5.17□□□□□ -1.58
NUP116YMR047C IRC10Q08118 586 aa5.17□□□□□ -1.58
NUP116YMR047C CLP1Q08685 445 aaPredicted RBP5.17□□□□□ -1.58
NUP116YMR047C OSH2Q12451 1283 aa5.17□□□□□ -1.58
NUP116YMR047C KEX1P09620 729 aa5.16□□□□□ -1.58
NUP116YMR047C SEC15P22224 910 aa5.16□□□□□ -1.58
NUP116YMR047C RDS1P25611 832 aa5.16□□□□□ -1.58
NUP116YMR047C PET112P33893 541 aa5.16□□□□□ -1.58
NUP116YMR047C PET10P36139 283 aa5.16□□□□□ -1.58
NUP116YMR047C VID24P38263 362 aa5.16□□□□□ -1.58
NUP116YMR047C ATG14P38270 344 aa5.16□□□□□ -1.58
NUP116YMR047C ARP1P38696 384 aa5.16□□□□□ -1.58
NUP116YMR047C RLP7P40693 322 aaKnown RBP5.16□□□□□ -1.58
NUP116YMR047C HAP5Q02516 242 aa5.16□□□□□ -1.58
NUP116YMR047C TSR2Q06672 205 aaKnown RBP5.16□□□□□ -1.58
NUP116YMR047C TLG2Q08144 397 aa5.16□□□□□ -1.58
NUP116YMR047C PKH2Q12236 1081 aaKnown RBP5.16□□□□□ -1.58
NUP116YMR047C CTF3Q12748 733 aa5.16□□□□□ -1.58
NUP116YMR047C TOM70P07213 617 aaKnown RBP5.16□□□□□ -1.58
NUP116YMR047C ASP3-2P0CX77 362 aa5.16□□□□□ -1.58
NUP116YMR047C ASP3-3P0CX78 362 aa5.16□□□□□ -1.58
NUP116YMR047C ASP3-4P0CX79 362 aa5.16□□□□□ -1.58
NUP116YMR047C ASP3-1P0CZ17 362 aa5.16□□□□□ -1.58
NUP116YMR047C VPS24P36095 224 aaKnown RBP5.16□□□□□ -1.58
NUP116YMR047C TCD1P38756 429 aa5.16□□□□□ -1.58
NUP116YMR047C NPA3P47122 385 aa5.16□□□□□ -1.58
NUP116YMR047C PNG1Q02890 363 aa5.16□□□□□ -1.58
NUP116YMR047C MTF1P14908 341 aaKnown RBP5.15□□□□□ -1.58
NUP116YMR047C OCA4P25366 362 aa5.15□□□□□ -1.58
NUP116YMR047C MFT1P33441 392 aaKnown RBP5.15□□□□□ -1.58
NUP116YMR047C APM2P38700 605 aa5.15□□□□□ -1.58
NUP116YMR047C SWD1P39706 426 aa5.15□□□□□ -1.58
NUP116YMR047C MAD1P40957 749 aa5.15□□□□□ -1.58
NUP116YMR047C MRS2Q01926 470 aa5.15□□□□□ -1.58
NUP116YMR047C LCD1Q04377 747 aa5.15□□□□□ -1.58
NUP116YMR047C YPL225WQ08971 146 aaKnown RBP5.15□□□□□ -1.58
NUP116YMR047C YBL111CQ3E7Y5 667 aa5.15□□□□□ -1.58
NUP116YMR047C TUF1P02992 437 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms