RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W TY1B-GR1Q12141 1755 aa9.42□□□□□ -0.9
SFP1YLR403W TY1B-BLQ12490 1755 aa9.42□□□□□ -0.9
SFP1YLR403W RRP43P25359 394 aaPredicted RBP9.42□□□□□ -0.9
SFP1YLR403W CDC15P27636 974 aa9.42□□□□□ -0.9
SFP1YLR403W CPR5P35176 225 aa9.42□□□□□ -0.9
SFP1YLR403W YBR287WP38355 427 aa9.42□□□□□ -0.9
SFP1YLR403W KAP114P53067 1004 aa9.42□□□□□ -0.9
SFP1YLR403W YNR063WP53749 607 aa9.42□□□□□ -0.9
SFP1YLR403W WAR1Q03631 944 aa9.42□□□□□ -0.9
SFP1YLR403W SMC5Q08204 1093 aa9.42□□□□□ -0.9
SFP1YLR403W ATG29Q12092 213 aa9.42□□□□□ -0.9
SFP1YLR403W TIP41Q12199 356 aa9.42□□□□□ -0.9
SFP1YLR403W RRP5Q05022 1729 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W SIR3P06701 978 aa9.41□□□□□ -0.9
SFP1YLR403W RAP1P11938 827 aa9.41□□□□□ -0.9
SFP1YLR403W STI1P15705 589 aaKnown RBP RIP-Chip data9.41□□□□□ -0.9not detected
SFP1YLR403W RAD53P22216 821 aa9.41□□□□□ -0.9
SFP1YLR403W MRPL8P22353 238 aa9.41□□□□□ -0.9
SFP1YLR403W MYO3P36006 1272 aa9.41□□□□□ -0.9
SFP1YLR403W TEF4P36008 412 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W TYS1P36421 394 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W KAP104P38217 918 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W NOP16P40007 231 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W SPO22P40511 975 aa9.41□□□□□ -0.9
SFP1YLR403W ALA1P40825 983 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W PSP2P50109 593 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W MRPL50P53724 139 aa9.41□□□□□ -0.9
SFP1YLR403W YDR179W-AQ03983 463 aa9.41□□□□□ -0.9
SFP1YLR403W YMR114CQ04471 368 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W SUB2Q07478 446 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W DIS3Q08162 1001 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W DAS2Q12084 232 aa9.41□□□□□ -0.9
SFP1YLR403W ADE8P04161 214 aa9.41□□□□□ -0.9
SFP1YLR403W GAL1P04385 528 aa9.41□□□□□ -0.9
SFP1YLR403W CMD1P06787 147 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W POL30P15873 258 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W PRP5P21372 849 aaPredicted RBP9.41□□□□□ -0.9
SFP1YLR403W PAT1P25644 796 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W KEL1P38853 1164 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W DOT6P40059 670 aaKnown RBP9.41□□□□□ -0.9
SFP1YLR403W DDI1P40087 428 aa9.41□□□□□ -0.9
SFP1YLR403W TED1P40533 473 aa9.41□□□□□ -0.9
SFP1YLR403W FOB1O13329 566 aa9.4□□□□□ -0.9
SFP1YLR403W DCD1P06773 312 aa9.4□□□□□ -0.9
SFP1YLR403W KRE5P22023 1365 aa9.4□□□□□ -0.9
SFP1YLR403W SPB1P25582 841 aaPredicted RBP9.4□□□□□ -0.9
SFP1YLR403W MIF2P35201 549 aa9.4□□□□□ -0.9
SFP1YLR403W ERT1P38140 529 aa9.4□□□□□ -0.9
SFP1YLR403W YTA12P40341 825 aa9.4□□□□□ -0.9
SFP1YLR403W RTS2P40962 232 aa9.4□□□□□ -0.9
SFP1YLR403W YFH7P43591 353 aa9.4□□□□□ -0.9
SFP1YLR403W ROK1P45818 564 aaPredicted RBP9.4□□□□□ -0.9
SFP1YLR403W OKP1P53298 406 aa9.4□□□□□ -0.9
SFP1YLR403W EGD1Q02642 157 aaKnown RBP9.4□□□□□ -0.9
SFP1YLR403W RMI1Q02685 241 aa9.4□□□□□ -0.9
SFP1YLR403W MLC2Q06580 163 aa9.4□□□□□ -0.9
SFP1YLR403W YEH2Q07950 538 aa9.4□□□□□ -0.9
SFP1YLR403W SSD1P24276 1250 aaKnown RBP RIP-Chip data9.4□□□□□ -0.91not detected
SFP1YLR403W CLB2P24869 491 aa9.4□□□□□ -0.91
SFP1YLR403W RVS161P25343 265 aaKnown RBP9.4□□□□□ -0.91
SFP1YLR403W PRR1P28708 518 aa9.4□□□□□ -0.91
SFP1YLR403W STO1P34160 861 aaKnown RBP9.4□□□□□ -0.91
SFP1YLR403W RTG3P38165 486 aa9.4□□□□□ -0.91
SFP1YLR403W BSD2P38356 321 aa9.4□□□□□ -0.91
SFP1YLR403W NPT1P39683 429 aaKnown RBP9.4□□□□□ -0.91
SFP1YLR403W NIT3P49954 291 aa9.4□□□□□ -0.91
SFP1YLR403W HOL1P53389 586 aa9.4□□□□□ -0.91
SFP1YLR403W NIS1P53939 407 aa9.4□□□□□ -0.91
SFP1YLR403W MAK10Q02197 733 aa9.4□□□□□ -0.91
SFP1YLR403W MEU1Q07938 337 aaKnown RBP RIP-Chip data9.4□□□□□ -0.91not detected
SFP1YLR403W SGO1Q08490 590 aa9.4□□□□□ -0.91
SFP1YLR403W CDC19P00549 500 aaKnown RBP9.39□□□□□ -0.91
SFP1YLR403W MST1P07236 462 aa9.39□□□□□ -0.91
SFP1YLR403W HOP09932 586 aa9.39□□□□□ -0.91
SFP1YLR403W REC107P21651 314 aa9.39□□□□□ -0.91
SFP1YLR403W YBL010CP32788 280 aa9.39□□□□□ -0.91
SFP1YLR403W APM3P38153 483 aa9.39□□□□□ -0.91
SFP1YLR403W RET2P43621 546 aa9.39□□□□□ -0.91
SFP1YLR403W NOP9P47077 666 aaKnown RBP9.39□□□□□ -0.91
SFP1YLR403W BRO1P48582 844 aa9.39□□□□□ -0.91
SFP1YLR403W ZRG17P53735 605 aa9.39□□□□□ -0.91
SFP1YLR403W SIW14P53965 281 aa9.39□□□□□ -0.91
SFP1YLR403W SRL4Q03085 281 aa9.39□□□□□ -0.91
SFP1YLR403W TFB3Q03290 321 aa9.39□□□□□ -0.91
SFP1YLR403W YLL007CQ07799 665 aa9.39□□□□□ -0.91
SFP1YLR403W GPN2Q08726 347 aaPredicted RBP9.39□□□□□ -0.91
SFP1YLR403W SNA3P14359 133 aa9.38□□□□□ -0.91
SFP1YLR403W CNS1P33313 385 aa9.38□□□□□ -0.91
SFP1YLR403W MDJ1P35191 511 aa9.38□□□□□ -0.91
SFP1YLR403W UBP11P36026 717 aa9.38□□□□□ -0.91
SFP1YLR403W YKR015CP36111 568 aa9.38□□□□□ -0.91
SFP1YLR403W FUI1P38196 639 aa9.38□□□□□ -0.91
SFP1YLR403W YGR054WP53235 642 aaKnown RBP9.38□□□□□ -0.91
SFP1YLR403W FOX2Q02207 900 aaKnown RBP9.38□□□□□ -0.91
SFP1YLR403W GCN5Q03330 439 aa9.38□□□□□ -0.91
SFP1YLR403W HMO1Q03973 246 aaKnown RBP9.38□□□□□ -0.91
SFP1YLR403W ALR1Q08269 859 aa9.38□□□□□ -0.91
SFP1YLR403W IPP1P00817 287 aaKnown RBP9.38□□□□□ -0.91
SFP1YLR403W MEF1P25039 761 aa9.38□□□□□ -0.91
SFP1YLR403W RAD57P25301 460 aa9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 72.1 ms