RNA–Protein interactions for RNA: YLR085C

ARP6, Transcript of Actin-related protein that binds nucleosomes, yeastyeast

Gene ARP6, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP6YLR085C ASP3-2P0CX77 362 aa10.58□□□□□ -0.72
ARP6YLR085C ASP3-3P0CX78 362 aa10.58□□□□□ -0.72
ARP6YLR085C ASP3-4P0CX79 362 aa10.58□□□□□ -0.72
ARP6YLR085C ASP3-1P0CZ17 362 aa10.58□□□□□ -0.72
ARP6YLR085C COX11P19516 300 aaKnown RBP10.58□□□□□ -0.72
ARP6YLR085C ECM32P32644 1121 aaKnown RBP10.58□□□□□ -0.72
ARP6YLR085C SPP381P38282 291 aaPredicted RBP10.58□□□□□ -0.72
ARP6YLR085C SAK1P38990 1142 aa10.58□□□□□ -0.72
ARP6YLR085C EEB1Q02891 456 aa10.58□□□□□ -0.72
ARP6YLR085C MSC2Q03455 724 aa10.58□□□□□ -0.72
ARP6YLR085C YDR278CQ05612 105 aa10.58□□□□□ -0.72
ARP6YLR085C ATG11Q12527 1178 aa10.58□□□□□ -0.72
ARP6YLR085C PRR1P28708 518 aa10.57□□□□□ -0.72
ARP6YLR085C DSF2P38213 736 aa10.57□□□□□ -0.72
ARP6YLR085C PHO86P46956 311 aa10.57□□□□□ -0.72
ARP6YLR085C CWC21Q03375 135 aaKnown RBP10.57□□□□□ -0.72
ARP6YLR085C ATG16Q03818 150 aa10.57□□□□□ -0.72
ARP6YLR085C YLR455WQ06188 304 aa10.57□□□□□ -0.72
ARP6YLR085C OMS1Q06668 471 aa10.57□□□□□ -0.72
ARP6YLR085C PUF3Q07807 879 aaKnown RBP RIP-Chip data10.57□□□□□ -0.72not detected
ARP6YLR085C SGT2Q12118 346 aaKnown RBP10.57□□□□□ -0.72
ARP6YLR085C RIO1Q12196 484 aaKnown RBP10.57□□□□□ -0.72
ARP6YLR085C TRM2P33753 639 aa10.56□□□□□ -0.72
ARP6YLR085C YBL055CP34220 418 aaPredicted RBP10.56□□□□□ -0.72
ARP6YLR085C TIF5P38431 405 aaKnown RBP10.56□□□□□ -0.72
ARP6YLR085C YNL320WP42840 284 aa10.56□□□□□ -0.72
ARP6YLR085C SKP2P42843 763 aa10.56□□□□□ -0.72
ARP6YLR085C RIM8P53179 542 aa10.56□□□□□ -0.72
ARP6YLR085C UTP6Q02354 440 aaKnown RBP10.56□□□□□ -0.72
ARP6YLR085C YOR059CQ08448 450 aaKnown RBP10.56□□□□□ -0.72
ARP6YLR085C TIF6Q12522 245 aaKnown RBP10.56□□□□□ -0.72
ARP6YLR085C RPS3P05750 240 aaKnown RBP10.55□□□□□ -0.72
ARP6YLR085C YER152CP10356 443 aa10.55□□□□□ -0.72
ARP6YLR085C KAR3P17119 729 aa10.55□□□□□ -0.72
ARP6YLR085C RGR1P19263 1082 aa10.55□□□□□ -0.72
ARP6YLR085C AFT1P22149 690 aa10.55□□□□□ -0.72
ARP6YLR085C EFB1P32471 206 aaKnown RBP10.55□□□□□ -0.72
ARP6YLR085C PBP2P38151 413 aaKnown RBP RIP-Chip data10.55□□□□□ -0.72not detected
ARP6YLR085C ECM2P38241 364 aaKnown RBP10.55□□□□□ -0.72
ARP6YLR085C BRE5P53741 515 aaKnown RBP10.55□□□□□ -0.72
ARP6YLR085C DAK1P54838 584 aaKnown RBP10.55□□□□□ -0.72
ARP6YLR085C GPD1Q00055 391 aaKnown RBP10.55□□□□□ -0.72
ARP6YLR085C RNT1Q02555 471 aa10.55□□□□□ -0.72
ARP6YLR085C TDA9Q04545 1251 aa10.55□□□□□ -0.72
ARP6YLR085C STE23Q06010 1027 aa10.55□□□□□ -0.72
ARP6YLR085C SFH1Q06168 426 aa10.55□□□□□ -0.72
ARP6YLR085C GAL10P04397 699 aa10.54□□□□□ -0.72
ARP6YLR085C SNA3P14359 133 aa10.54□□□□□ -0.72
ARP6YLR085C PRP9P19736 530 aaKnown RBP10.54□□□□□ -0.72
ARP6YLR085C MSS51P32335 436 aa10.54□□□□□ -0.72
ARP6YLR085C NUD1P32336 851 aa10.54□□□□□ -0.72
ARP6YLR085C RGD1P38339 666 aa10.54□□□□□ -0.72
ARP6YLR085C VPS41P38959 992 aa10.54□□□□□ -0.72
ARP6YLR085C YJR107WP47145 328 aa10.54□□□□□ -0.72
ARP6YLR085C YMR187CQ03236 431 aa10.54□□□□□ -0.72
ARP6YLR085C PSE1P32337 1089 aaKnown RBP10.53□□□□□ -0.72
ARP6YLR085C GCD6P32501 712 aaKnown RBP10.53□□□□□ -0.72
ARP6YLR085C SEG2P34250 1132 aa10.53□□□□□ -0.72
ARP6YLR085C SAH1P39954 449 aaKnown RBP10.53□□□□□ -0.72
ARP6YLR085C ASG1P40467 964 aa10.53□□□□□ -0.72
ARP6YLR085C CTK3P46963 296 aaPredicted RBP10.53□□□□□ -0.72
ARP6YLR085C INP52P50942 1183 aa10.53□□□□□ -0.72
ARP6YLR085C ALT1P52893 592 aa10.53□□□□□ -0.72
ARP6YLR085C NOG2P53742 486 aaKnown RBP10.53□□□□□ -0.72
ARP6YLR085C YML020WQ03722 664 aa10.53□□□□□ -0.72
ARP6YLR085C YPR109WQ06104 294 aa10.53□□□□□ -0.72
ARP6YLR085C RTP1Q12751 981 aa10.53□□□□□ -0.72
ARP6YLR085C ADE4P04046 510 aaKnown RBP10.52□□□□□ -0.73
ARP6YLR085C SPT5P27692 1063 aaKnown RBP10.52□□□□□ -0.73
ARP6YLR085C BCS1P32839 456 aa10.52□□□□□ -0.73
ARP6YLR085C END3P39013 349 aa10.52□□□□□ -0.73
ARP6YLR085C AIM21P40563 679 aa10.52□□□□□ -0.73
ARP6YLR085C MTG1Q03151 367 aaPredicted RBP10.52□□□□□ -0.73
ARP6YLR085C UFO1Q04511 668 aa10.52□□□□□ -0.73
ARP6YLR085C PRT1P06103 763 aaKnown RBP10.51□□□□□ -0.73
ARP6YLR085C PMS1P14242 873 aa10.51□□□□□ -0.73
ARP6YLR085C SPO16P17122 198 aa10.51□□□□□ -0.73
ARP6YLR085C CAP1P28495 268 aaKnown RBP10.51□□□□□ -0.73
ARP6YLR085C ABD1P32783 436 aaPredicted RBP10.51□□□□□ -0.73
ARP6YLR085C SLD2P34252 453 aa10.51□□□□□ -0.73
ARP6YLR085C GDT1P38301 280 aaPredicted RBP10.51□□□□□ -0.73
ARP6YLR085C ETP1P38748 585 aaKnown RBP10.51□□□□□ -0.73
ARP6YLR085C QNS1P38795 714 aaKnown RBP10.51□□□□□ -0.73
ARP6YLR085C CCT2P39076 527 aaKnown RBP10.51□□□□□ -0.73
ARP6YLR085C LAM5P43560 674 aa10.51□□□□□ -0.73
ARP6YLR085C NMD5P46970 1048 aa10.51□□□□□ -0.73
ARP6YLR085C YGL036WP53185 909 aaPredicted RBP10.51□□□□□ -0.73
ARP6YLR085C HOP2P53187 214 aa10.51□□□□□ -0.73
ARP6YLR085C IVY1Q04934 453 aa10.51□□□□□ -0.73
ARP6YLR085C ICL2Q12031 575 aa10.51□□□□□ -0.73
ARP6YLR085C MOT1P32333 1867 aa10.5□□□□□ -0.73
ARP6YLR085C BI2P03873 423 aa10.5□□□□□ -0.73
ARP6YLR085C BI4P03879 638 aa10.5□□□□□ -0.73
ARP6YLR085C COX4P04037 155 aa10.5□□□□□ -0.73
ARP6YLR085C ARG4P04076 463 aaPredicted RBP10.5□□□□□ -0.73
ARP6YLR085C VHC1P38329 1120 aa10.5□□□□□ -0.73
ARP6YLR085C MSG5P38590 489 aa10.5□□□□□ -0.73
ARP6YLR085C APM2P38700 605 aa10.5□□□□□ -0.73
ARP6YLR085C GEM1P39722 662 aa10.5□□□□□ -0.73
ARP6YLR085C TMN3P40071 706 aa10.5□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 98.5 ms