RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	CHS1	P08004	1131 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	PAH1	P32567	862 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	RRN7	P40992	514 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	TIF35	Q04067	274 aa	Known RBP	4.16	□□□□□ -1.74
LOS1	YKL205W	YDL121C	Q07541	149 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	AEP2	P22136	580 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	SRB4	P32569	687 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	LYS9	P38999	446 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	STP1	Q00947	519 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	MZM1	Q03429	123 aa	Predicted RBP	4.16	□□□□□ -1.74
LOS1	YKL205W	VTI1	Q04338	217 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	IMA3	P0CW40	589 aa		4.15	□□□□□ -1.74
LOS1	YKL205W	IMA4	P0CW41	589 aa		4.15	□□□□□ -1.74
LOS1	YKL205W	PSO2	P30620	661 aa		4.15	□□□□□ -1.74
LOS1	YKL205W	ECM2	P38241	364 aa	Known RBP	4.15	□□□□□ -1.74
LOS1	YKL205W	IES1	P43579	692 aa		4.15	□□□□□ -1.74
LOS1	YKL205W	AVT1	P47082	602 aa		4.15	□□□□□ -1.74
LOS1	YKL205W	SGM1	P47166	707 aa		4.15	□□□□□ -1.74
LOS1	YKL205W	YGL036W	P53185	909 aa	Predicted RBP	4.15	□□□□□ -1.74
LOS1	YKL205W	IMA2	Q08295	589 aa		4.15	□□□□□ -1.74
LOS1	YKL205W	RSA4	P25382	515 aa	Known RBP	4.15	□□□□□ -1.75
LOS1	YKL205W	PCA1	P38360	1216 aa		4.15	□□□□□ -1.75
LOS1	YKL205W	SPT8	P38915	602 aa		4.15	□□□□□ -1.75
LOS1	YKL205W	MVP1	P40959	511 aa	Known RBP	4.15	□□□□□ -1.75
LOS1	YKL205W	IML2	P47031	731 aa		4.15	□□□□□ -1.75
LOS1	YKL205W	YJR054W	P47114	497 aa		4.15	□□□□□ -1.75
LOS1	YKL205W	HLJ1	P48353	224 aa		4.15	□□□□□ -1.75
LOS1	YKL205W	GCV2	P49095	1034 aa		4.15	□□□□□ -1.75
LOS1	YKL205W	KAP114	P53067	1004 aa		4.15	□□□□□ -1.75
LOS1	YKL205W	THI7	Q05998	598 aa		4.15	□□□□□ -1.75
LOS1	YKL205W	INO1	P11986	533 aa		4.15	□□□□□ -1.75
LOS1	YKL205W	AAT2	P23542	418 aa	Known RBP	4.15	□□□□□ -1.75
LOS1	YKL205W	ATG3	P40344	310 aa		4.15	□□□□□ -1.75
LOS1	YKL205W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	RIP-Chip
LOS1	YKL205W	ALG11	P53954	548 aa	Known RBP	4.15	□□□□□ -1.75
LOS1	YKL205W	STE20	Q03497	939 aa	Known RBP	4.15	□□□□□ -1.75
LOS1	YKL205W	GIR2	Q03768	265 aa	Predicted RBP	4.15	□□□□□ -1.75
LOS1	YKL205W	CWC2	Q12046	339 aa	Predicted RBP	4.15	□□□□□ -1.75
LOS1	YKL205W	YOR022C	Q12204	715 aa		4.15	□□□□□ -1.75
LOS1	YKL205W	NOP14	Q99207	810 aa	Known RBP	4.15	□□□□□ -1.75
LOS1	YKL205W	REV1	P12689	985 aa		4.14	□□□□□ -1.75
LOS1	YKL205W	RFS1	P38234	210 aa	Known RBP	4.14	□□□□□ -1.75
LOS1	YKL205W	END3	P39013	349 aa		4.14	□□□□□ -1.75
LOS1	YKL205W	MMM1	P41800	426 aa		4.14	□□□□□ -1.75
LOS1	YKL205W	PSP1	P50896	841 aa	Known RBP	4.14	□□□□□ -1.75
LOS1	YKL205W	JJJ1	P53863	590 aa		4.14	□□□□□ -1.75
LOS1	YKL205W	GAL10	P04397	699 aa		4.14	□□□□□ -1.75
LOS1	YKL205W	CHS2	P14180	963 aa		4.14	□□□□□ -1.75
LOS1	YKL205W	YKR051W	P36142	418 aa		4.14	□□□□□ -1.75
LOS1	YKL205W	SAE2	P46946	345 aa		4.14	□□□□□ -1.75
LOS1	YKL205W	HOP2	P53187	214 aa		4.14	□□□□□ -1.75
LOS1	YKL205W	YLR287C	Q05881	355 aa		4.14	□□□□□ -1.75
LOS1	YKL205W	ATG9	Q12142	997 aa		4.14	□□□□□ -1.75
LOS1	YKL205W	UBR1	P19812	1950 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	TOM70	P07213	617 aa	Known RBP	4.13	□□□□□ -1.75
LOS1	YKL205W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
LOS1	YKL205W	ULP2	P40537	1034 aa	Predicted RBP	4.13	□□□□□ -1.75
LOS1	YKL205W	TAF1	P46677	1066 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	BRO1	P48582	844 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	PSR1	Q07800	427 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	NOC3	Q07896	663 aa	Predicted RBP	4.13	□□□□□ -1.75
LOS1	YKL205W	CCP1	P00431	361 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	PMI40	P29952	429 aa	Known RBP	4.13	□□□□□ -1.75
LOS1	YKL205W	SMI1	P32566	505 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	VID24	P38263	362 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	ERC1	P38767	581 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	AIM18	P38884	321 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	VPS25	P47142	202 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	MET13	P53128	600 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	TUB4	P53378	473 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	YNL134C	P53912	376 aa	Known RBP	4.13	□□□□□ -1.75
LOS1	YKL205W	HOS3	Q02959	697 aa	Known RBP	4.13	□□□□□ -1.75
LOS1	YKL205W	SND1	Q04007	877 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	PSR2	Q07949	397 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	APL5	Q08951	932 aa	Known RBP	4.13	□□□□□ -1.75
LOS1	YKL205W	SPO21	Q12411	609 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	RPB2	P08518	1224 aa	Known RBP	4.13	□□□□□ -1.75
LOS1	YKL205W	RPO26	P20435	155 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	TSR4	P25040	408 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	PGS1	P25578	521 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	MSH1	P25846	959 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	NIP1	P32497	812 aa	Known RBP	4.13	□□□□□ -1.75
LOS1	YKL205W	KAP104	P38217	918 aa	Known RBP	4.13	□□□□□ -1.75
LOS1	YKL205W	PRP31	P49704	494 aa	Predicted RBP	4.13	□□□□□ -1.75
LOS1	YKL205W	ALT1	P52893	592 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	SPO75	Q07798	868 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	YOR131C	Q12486	218 aa		4.13	□□□□□ -1.75
LOS1	YKL205W	MTF1	P14908	341 aa	Known RBP	4.12	□□□□□ -1.75
LOS1	YKL205W	PDC6	P26263	563 aa	Known RBP	4.12	□□□□□ -1.75
LOS1	YKL205W	SEC65	P29478	273 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	SAC6	P32599	642 aa	Known RBP	4.12	□□□□□ -1.75
LOS1	YKL205W	TKL2	P33315	681 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	TSA1	P34760	196 aa	Known RBP	4.12	□□□□□ -1.75
LOS1	YKL205W	PCM1	P38628	557 aa	Known RBP	4.12	□□□□□ -1.75
LOS1	YKL205W	NUP84	P52891	726 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	YGL081W	P53156	320 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	RCF2	P53721	224 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	BRE5	P53741	515 aa	Known RBP	4.12	□□□□□ -1.75
LOS1	YKL205W	ECM22	Q05958	814 aa	Predicted RBP	4.12	□□□□□ -1.75
LOS1	YKL205W	YLH47	Q06493	454 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms