RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	PAF1	P38351	445 aa		5.42	□□□□□ -1.54
EBP2	YKL172W	CCT3	P39077	534 aa	Known RBP	5.42	□□□□□ -1.54
EBP2	YKL172W	HOS4	P40480	1083 aa		5.42	□□□□□ -1.54
EBP2	YKL172W	DUG1	P43616	481 aa	Known RBP	5.42	□□□□□ -1.54
EBP2	YKL172W	YJL163C	P46996	555 aa		5.42	□□□□□ -1.54
EBP2	YKL172W	SUN4	P53616	420 aa		5.42	□□□□□ -1.54
EBP2	YKL172W	ECM9	Q02202	377 aa		5.42	□□□□□ -1.54
EBP2	YKL172W	TRE2	Q08693	809 aa		5.42	□□□□□ -1.54
EBP2	YKL172W	APM4	Q99186	491 aa		5.42	□□□□□ -1.54
EBP2	YKL172W	SWI6	P09959	803 aa		5.41	□□□□□ -1.54
EBP2	YKL172W	RNR1	P21524	888 aa	Known RBP	5.41	□□□□□ -1.54
EBP2	YKL172W	MRC1	P25588	1096 aa		5.41	□□□□□ -1.54
EBP2	YKL172W	REV7	P38927	245 aa		5.41	□□□□□ -1.54
EBP2	YKL172W	NUG1	P40010	520 aa	Known RBP	5.41	□□□□□ -1.54
EBP2	YKL172W	COX18	P53239	316 aa		5.41	□□□□□ -1.54
EBP2	YKL172W	LEE1	Q02799	301 aa	Known RBP	5.41	□□□□□ -1.54
EBP2	YKL172W	YMR210W	Q03649	449 aa		5.41	□□□□□ -1.54
EBP2	YKL172W	OMS1	Q06668	471 aa		5.41	□□□□□ -1.54
EBP2	YKL172W	SGO1	Q08490	590 aa		5.41	□□□□□ -1.54
EBP2	YKL172W	DIA2	Q08496	732 aa	Predicted RBP	5.41	□□□□□ -1.54
EBP2	YKL172W	TRM13	Q12383	476 aa		5.41	□□□□□ -1.54
EBP2	YKL172W	ERG20	P08524	352 aa	Known RBP	5.4	□□□□□ -1.54
EBP2	YKL172W	PET127	P32606	800 aa		5.4	□□□□□ -1.54
EBP2	YKL172W	BCD1	P38772	366 aa		5.4	□□□□□ -1.54
EBP2	YKL172W	NUP60	P39705	539 aa		5.4	□□□□□ -1.54
EBP2	YKL172W	FMP52	P40008	231 aa		5.4	□□□□□ -1.54
EBP2	YKL172W	UBC11	P52492	156 aa		5.4	□□□□□ -1.54
EBP2	YKL172W	YHM2	Q04013	314 aa		5.4	□□□□□ -1.54
EBP2	YKL172W	YLR407W	Q06070	228 aa		5.4	□□□□□ -1.54
EBP2	YKL172W	ISA1	Q07821	250 aa	Predicted RBP	5.4	□□□□□ -1.54
EBP2	YKL172W	VHS3	Q08438	674 aa		5.4	□□□□□ -1.54
EBP2	YKL172W	HFI1	Q12060	488 aa		5.4	□□□□□ -1.54
EBP2	YKL172W	CLF1	Q12309	687 aa	Predicted RBP	5.4	□□□□□ -1.54
EBP2	YKL172W	RMP1	Q12530	201 aa		5.4	□□□□□ -1.54
EBP2	YKL172W	HRP1	Q99383	534 aa	Known RBP	5.4	□□□□□ -1.54
EBP2	YKL172W	IMG2	P25642	146 aa	Predicted RBP	5.39	□□□□□ -1.55
EBP2	YKL172W	SEC65	P29478	273 aa		5.39	□□□□□ -1.55
EBP2	YKL172W	OAF3	P36023	863 aa		5.39	□□□□□ -1.55
EBP2	YKL172W	HXT6	P39003	570 aa	Known RBP	5.39	□□□□□ -1.55
EBP2	YKL172W	HXT7	P39004	570 aa		5.39	□□□□□ -1.55
EBP2	YKL172W	YAP1802	P53309	568 aa		5.39	□□□□□ -1.55
EBP2	YKL172W	RIA1	P53893	1110 aa		5.39	□□□□□ -1.55
EBP2	YKL172W	TIM44	Q01852	431 aa		5.39	□□□□□ -1.55
EBP2	YKL172W	PNS1	Q12412	539 aa		5.39	□□□□□ -1.55
EBP2	YKL172W	AEP2	P22136	580 aa		5.38	□□□□□ -1.55
EBP2	YKL172W	PEX1	P24004	1043 aa		5.38	□□□□□ -1.55
EBP2	YKL172W	EUG1	P32474	517 aa		5.38	□□□□□ -1.55
EBP2	YKL172W	YKU70	P32807	602 aa		5.38	□□□□□ -1.55
EBP2	YKL172W	HIS7	P33734	552 aa	Known RBP	5.38	□□□□□ -1.55
EBP2	YKL172W	CHS7	P38843	316 aa		5.38	□□□□□ -1.55
EBP2	YKL172W	NOP9	P47077	666 aa	Known RBP	5.38	□□□□□ -1.55
EBP2	YKL172W	MTL1	P53214	551 aa		5.38	□□□□□ -1.55
EBP2	YKL172W	VBA4	Q04602	768 aa	Known RBP	5.38	□□□□□ -1.55
EBP2	YKL172W	IRC13	Q08630	104 aa		5.38	□□□□□ -1.55
EBP2	YKL172W	TMA17	Q12513	150 aa		5.38	□□□□□ -1.55
EBP2	YKL172W	RPS21B	Q3E754	87 aa	Known RBP	5.38	□□□□□ -1.55
EBP2	YKL172W	FRS1	P15624	595 aa	Known RBP	5.37	□□□□□ -1.55
EBP2	YKL172W	PRP22	P24384	1145 aa	Known RBP	5.37	□□□□□ -1.55
EBP2	YKL172W	MVD1	P32377	396 aa	Known RBP	5.37	□□□□□ -1.55
EBP2	YKL172W	YBR071W	P38243	211 aa		5.37	□□□□□ -1.55
EBP2	YKL172W	YHL017W	P38745	532 aa		5.37	□□□□□ -1.55
EBP2	YKL172W	FMO1	P38866	432 aa		5.37	□□□□□ -1.55
EBP2	YKL172W	LYS9	P38999	446 aa		5.37	□□□□□ -1.55
EBP2	YKL172W	RSC8	P43609	557 aa	Known RBP	5.37	□□□□□ -1.55
EBP2	YKL172W	ENP2	P48234	707 aa	Known RBP	5.37	□□□□□ -1.55
EBP2	YKL172W	NOP15	P53927	220 aa	Predicted RBP	5.37	□□□□□ -1.55
EBP2	YKL172W	CTF4	Q01454	927 aa		5.37	□□□□□ -1.55
EBP2	YKL172W	PPN1	Q04119	674 aa		5.37	□□□□□ -1.55
EBP2	YKL172W	ACF2	Q12168	779 aa		5.37	□□□□□ -1.55
EBP2	YKL172W	RPS17A	P02407	136 aa	Known RBP	5.36	□□□□□ -1.55
EBP2	YKL172W	RPS17B	P14127	136 aa	Known RBP	5.36	□□□□□ -1.55
EBP2	YKL172W	SEC15	P22224	910 aa		5.36	□□□□□ -1.55
EBP2	YKL172W	ERG6	P25087	383 aa	Known RBP	5.36	□□□□□ -1.55
EBP2	YKL172W	KIN82	P25341	720 aa		5.36	□□□□□ -1.55
EBP2	YKL172W	GET2	P40056	285 aa		5.36	□□□□□ -1.55
EBP2	YKL172W	RNR4	P49723	345 aa	Known RBP	5.36	□□□□□ -1.55
EBP2	YKL172W	TEL2	P53038	688 aa		5.36	□□□□□ -1.55
EBP2	YKL172W	POM34	Q12445	299 aa		5.36	□□□□□ -1.55
EBP2	YKL172W	YKL033W-A	Q86ZR7	236 aa		5.36	□□□□□ -1.55
EBP2	YKL172W	ECM3	Q99252	613 aa		5.36	□□□□□ -1.55
EBP2	YKL172W	SIR3	P06701	978 aa		5.35	□□□□□ -1.55
EBP2	YKL172W	PPS1	P38148	807 aa		5.35	□□□□□ -1.55
EBP2	YKL172W	DUN1	P39009	513 aa		5.35	□□□□□ -1.55
EBP2	YKL172W	GPP2	P40106	250 aa	Known RBP	5.35	□□□□□ -1.55
EBP2	YKL172W	SKY1	Q03656	742 aa		5.35	□□□□□ -1.55
EBP2	YKL172W	THI22	Q06490	572 aa		5.35	□□□□□ -1.55
EBP2	YKL172W	HIR1	P32479	840 aa		5.34	□□□□□ -1.55
EBP2	YKL172W	YNL195C	P40168	261 aa		5.34	□□□□□ -1.55
EBP2	YKL172W	PIG2	P40187	538 aa		5.34	□□□□□ -1.55
EBP2	YKL172W	PXA1	P41909	870 aa		5.34	□□□□□ -1.55
EBP2	YKL172W	NIT2	P47016	307 aa		5.34	□□□□□ -1.55
EBP2	YKL172W	BIT61	P47041	543 aa		5.34	□□□□□ -1.55
EBP2	YKL172W	PAN2	P53010	1115 aa	Predicted RBP	5.34	□□□□□ -1.55
EBP2	YKL172W	SSL2	Q00578	843 aa		5.34	□□□□□ -1.55
EBP2	YKL172W	NSE5	Q03718	556 aa		5.34	□□□□□ -1.55
EBP2	YKL172W	HBT1	Q07653	1046 aa	Known RBP	5.34	□□□□□ -1.55
EBP2	YKL172W	YPR027C	Q12079	277 aa		5.34	□□□□□ -1.55
EBP2	YKL172W	RPS9B	P05755	195 aa	Known RBP	5.33	□□□□□ -1.56
EBP2	YKL172W	RPS21A	P0C0V8	87 aa	Known RBP	5.33	□□□□□ -1.56
EBP2	YKL172W	PRP28	P23394	588 aa		5.33	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms