RNA–Protein interactions for RNA: YKL078W

DHR2, Transcript of Predominantly nucleolar DEAH-box ATP-dependent RNA helicase, yeast

Gene DHR2, Length 2,208 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DHR2	YKL078W	QCR6	P00127	147 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	ADP1	P25371	1049 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	COQ2	P32378	372 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	ZRG8	P40021	1076 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	YFL066C	P43538	392 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	PRY1	P47032	299 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	TCB2	P48231	1178 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	GRX3	Q03835	250 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	RIB2	Q12362	591 aa	Known RBP	4.57	□□□□□ -1.68
DHR2	YKL078W	HIF1	Q12373	385 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	RPS21B	Q3E754	87 aa	Known RBP	4.57	□□□□□ -1.68
DHR2	YKL078W	SPO14	P36126	1683 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	ULS1	Q08562	1619 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	SWI6	P09959	803 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	SSH4	P32343	579 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	RPD3	P32561	433 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	PGM1	P33401	570 aa	Known RBP	4.57	□□□□□ -1.68
DHR2	YKL078W	ABZ1	P37254	787 aa	Predicted RBP	4.57	□□□□□ -1.68
DHR2	YKL078W	ACA1	P39970	489 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	SAP185	P40856	1058 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	SVL3	Q03088	825 aa	Known RBP	4.57	□□□□□ -1.68
DHR2	YKL078W	YDR215C	Q12240	137 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	Q0142	Q9ZZW4	58 aa		4.57	□□□□□ -1.68
DHR2	YKL078W	MLP2	P40457	1679 aa		4.56	□□□□□ -1.68
DHR2	YKL078W	TAT1	P38085	619 aa		4.56	□□□□□ -1.68
DHR2	YKL078W	MIP6	P38760	659 aa	Known RBP	4.56	□□□□□ -1.68
DHR2	YKL078W	FUN12	P39730	1002 aa	Known RBP	4.56	□□□□□ -1.68
DHR2	YKL078W	ENP2	P48234	707 aa	Known RBP	4.56	□□□□□ -1.68
DHR2	YKL078W	NUP157	P40064	1391 aa	Known RBP	4.56	□□□□□ -1.68
DHR2	YKL078W	IQG1	Q12280	1495 aa		4.56	□□□□□ -1.68
DHR2	YKL078W	GDB1	Q06625	1536 aa		4.56	□□□□□ -1.68
DHR2	YKL078W	HOP1	P20050	605 aa		4.56	□□□□□ -1.68
DHR2	YKL078W	SSY1	Q03770	852 aa		4.56	□□□□□ -1.68
DHR2	YKL078W	SSL1	Q04673	461 aa	Predicted RBP	4.56	□□□□□ -1.68
DHR2	YKL078W	IRC20	Q06554	1556 aa		4.56	□□□□□ -1.68
DHR2	YKL078W	TRM3	Q07527	1436 aa		4.55	□□□□□ -1.68
DHR2	YKL078W	RPS0A	P32905	252 aa	Known RBP	4.55	□□□□□ -1.68
DHR2	YKL078W	SER1	P33330	395 aa	Known RBP	4.55	□□□□□ -1.68
DHR2	YKL078W	CTF8	P38877	133 aa		4.55	□□□□□ -1.68
DHR2	YKL078W	BEM4	P39011	633 aa		4.55	□□□□□ -1.68
DHR2	YKL078W	ERP2	P39704	215 aa		4.55	□□□□□ -1.68
DHR2	YKL078W	QRI7	P43122	407 aa		4.55	□□□□□ -1.68
DHR2	YKL078W	ORC4	P54791	529 aa		4.55	□□□□□ -1.68
DHR2	YKL078W	YMR187C	Q03236	431 aa		4.55	□□□□□ -1.68
DHR2	YKL078W	ECM38	Q05902	660 aa	Predicted RBP	4.55	□□□□□ -1.68
DHR2	YKL078W	SPE1	P08432	466 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	MSS18	P08593	268 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	DBF20	P32328	564 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	PET309	P32522	965 aa	Predicted RBP	4.54	□□□□□ -1.68
DHR2	YKL078W	FAT1	P38225	669 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	SRP68	P38687	599 aa	Known RBP	4.54	□□□□□ -1.68
DHR2	YKL078W	SDP1	P40479	209 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	MND2	P40577	368 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	SSY5	P47002	699 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	NSG2	P53898	299 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	COG4	Q06096	861 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	PHM7	Q12252	991 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	BUD3	P25558	1636 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	SDS22	P36047	338 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	YHR078W	P38799	552 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	SAW1	P39735	261 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	TAF1	P46677	1066 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	ORC3	P54790	616 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	KCS1	Q12494	1050 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	PDR15	Q04182	1529 aa	Known RBP	4.54	□□□□□ -1.68
DHR2	YKL078W	DNF2	Q12675	1612 aa		4.54	□□□□□ -1.68
DHR2	YKL078W	HSP82	P02829	709 aa	Known RBP	4.53	□□□□□ -1.68
DHR2	YKL078W	KAE1	P36132	386 aa		4.53	□□□□□ -1.68
DHR2	YKL078W	KTR4	P38131	464 aa		4.53	□□□□□ -1.68
DHR2	YKL078W	VID27	P40157	782 aa		4.53	□□□□□ -1.68
DHR2	YKL078W	VPS27	P40343	622 aa	Known RBP	4.53	□□□□□ -1.68
DHR2	YKL078W	MTR3	P48240	250 aa	Predicted RBP	4.53	□□□□□ -1.68
DHR2	YKL078W	BRE5	P53741	515 aa	Known RBP	4.53	□□□□□ -1.68
DHR2	YKL078W	ARP4	P80428	489 aa		4.53	□□□□□ -1.68
DHR2	YKL078W	YOL114C	Q12322	202 aa		4.53	□□□□□ -1.68
DHR2	YKL078W	AKL1	P38080	1108 aa	Known RBP	4.53	□□□□□ -1.68
DHR2	YKL078W	PZF1	P39933	429 aa		4.53	□□□□□ -1.68
DHR2	YKL078W	ASK10	P48361	1146 aa		4.53	□□□□□ -1.68
DHR2	YKL078W	NOP15	P53927	220 aa	Predicted RBP	4.53	□□□□□ -1.68
DHR2	YKL078W	YMR210W	Q03649	449 aa		4.53	□□□□□ -1.68
DHR2	YKL078W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
DHR2	YKL078W	YLR122C	Q12312	125 aa		4.53	□□□□□ -1.68
DHR2	YKL078W	CMP2	P14747	604 aa		4.52	□□□□□ -1.69
DHR2	YKL078W	MSM1	P22438	575 aa		4.52	□□□□□ -1.69
DHR2	YKL078W	YCK2	P23292	546 aa	Known RBP	4.52	□□□□□ -1.69
DHR2	YKL078W	NGG1	P32494	702 aa		4.52	□□□□□ -1.69
DHR2	YKL078W	RPN12	P32496	274 aa		4.52	□□□□□ -1.69
DHR2	YKL078W	EXO84	P38261	753 aa		4.52	□□□□□ -1.69
DHR2	YKL078W	SLN1	P39928	1220 aa	Predicted RBP	4.52	□□□□□ -1.69
DHR2	YKL078W	URM1	P40554	99 aa	Predicted RBP	4.52	□□□□□ -1.69
DHR2	YKL078W	SET2	P46995	733 aa	Known RBP	4.52	□□□□□ -1.69
DHR2	YKL078W	PUS4	P48567	403 aa	Known RBP	4.52	□□□□□ -1.69
DHR2	YKL078W	YBP2	P53169	641 aa		4.52	□□□□□ -1.69
DHR2	YKL078W	TEP1	P53916	434 aa		4.52	□□□□□ -1.69
DHR2	YKL078W	YML131W	Q03102	365 aa		4.52	□□□□□ -1.69
DHR2	YKL078W	HLR1	Q04429	423 aa		4.52	□□□□□ -1.69
DHR2	YKL078W	YLR407W	Q06070	228 aa		4.52	□□□□□ -1.69
DHR2	YKL078W	BRE1	Q07457	700 aa	Known RBP	4.52	□□□□□ -1.69
DHR2	YKL078W	PSF3	Q12146	194 aa		4.52	□□□□□ -1.69
DHR2	YKL078W	ARP7	Q12406	477 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms