RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPS1	YJL172W	PGS1	P25578	521 aa		5.11	□□□□□ -1.59
CPS1	YJL172W	DAL80	P26343	269 aa		5.11	□□□□□ -1.59
CPS1	YJL172W	BMH1	P29311	267 aa	Known RBP	5.11	□□□□□ -1.59
CPS1	YJL172W	SET3	P36124	751 aa		5.11	□□□□□ -1.59
CPS1	YJL172W	APE3	P37302	537 aa	Known RBP	5.11	□□□□□ -1.59
CPS1	YJL172W	SAK1	P38990	1142 aa		5.11	□□□□□ -1.59
CPS1	YJL172W	CCT3	P39077	534 aa	Known RBP	5.11	□□□□□ -1.59
CPS1	YJL172W	CAJ1	P39101	391 aa		5.11	□□□□□ -1.59
CPS1	YJL172W	PCI8	P40512	444 aa		5.11	□□□□□ -1.59
CPS1	YJL172W	ATG1	P53104	897 aa		5.11	□□□□□ -1.59
CPS1	YJL172W	TUB4	P53378	473 aa		5.11	□□□□□ -1.59
CPS1	YJL172W	COP1	P53622	1201 aa	Known RBP	5.11	□□□□□ -1.59
CPS1	YJL172W	YNL144C	P53907	740 aa		5.11	□□□□□ -1.59
CPS1	YJL172W	YML037C	Q03703	340 aa		5.11	□□□□□ -1.59
CPS1	YJL172W	PLP1	Q04004	230 aa		5.11	□□□□□ -1.59
CPS1	YJL172W	EIS1	Q05050	843 aa	Known RBP	5.11	□□□□□ -1.59
CPS1	YJL172W	ADE13	Q05911	482 aa	Known RBP	5.11	□□□□□ -1.59
CPS1	YJL172W	VIP1	Q06685	1146 aa	Known RBP	5.11	□□□□□ -1.59
CPS1	YJL172W	AIR2	Q12476	344 aa	Known RBP	5.11	□□□□□ -1.59
CPS1	YJL172W	TIF6	Q12522	245 aa	Known RBP	5.11	□□□□□ -1.59
CPS1	YJL172W	YGR161W-C	Q3E744	92 aa		5.11	□□□□□ -1.59
CPS1	YJL172W	TOM70	P07213	617 aa	Known RBP	5.1	□□□□□ -1.59
CPS1	YJL172W	RAD18	P10862	487 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	PMR1	P13586	950 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	VMA2	P16140	517 aa	Known RBP	5.1	□□□□□ -1.59
CPS1	YJL172W	MCM3	P24279	971 aa	Known RBP	5.1	□□□□□ -1.59
CPS1	YJL172W	MEF1	P25039	761 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	STO1	P34160	861 aa	Known RBP	5.1	□□□□□ -1.59
CPS1	YJL172W	PSY4	P38193	441 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	SMC2	P38989	1170 aa	Known RBP	5.1	□□□□□ -1.59
CPS1	YJL172W	CCT4	P39078	528 aa	Known RBP	5.1	□□□□□ -1.59
CPS1	YJL172W	GPB2	P39717	880 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	VAC8	P39968	578 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	ILM1	P47155	203 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	YGR153W	P48238	217 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	NAF1	P53919	492 aa	Known RBP	5.1	□□□□□ -1.59
CPS1	YJL172W	ASI1	P54074	624 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	CUS1	Q02554	436 aa	Predicted RBP	5.1	□□□□□ -1.59
CPS1	YJL172W	CSM3	Q04659	317 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	STE23	Q06010	1027 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	RSC3	Q06639	885 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	TIP41	Q12199	356 aa		5.1	□□□□□ -1.59
CPS1	YJL172W	CDC19	P00549	500 aa	Known RBP	5.09	□□□□□ -1.59
CPS1	YJL172W	RPS3	P05750	240 aa	Known RBP	5.09	□□□□□ -1.59
CPS1	YJL172W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
CPS1	YJL172W	RDS2	P19541	446 aa	Known RBP	5.09	□□□□□ -1.59
CPS1	YJL172W	PMA2	P19657	947 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	RPO26	P20435	155 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	MBR1	P23493	339 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	DPB3	P27344	201 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	GCD11	P32481	527 aa	Known RBP	5.09	□□□□□ -1.59
CPS1	YJL172W	VPH1	P32563	840 aa	Known RBP	5.09	□□□□□ -1.59
CPS1	YJL172W	SFA1	P32771	386 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	SLA2	P33338	968 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	STE13	P33894	931 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	RSM22	P36056	628 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	TRZ1	P36159	838 aa	Predicted RBP	5.09	□□□□□ -1.59
CPS1	YJL172W	MAK5	P38112	773 aa	Predicted RBP	5.09	□□□□□ -1.59
CPS1	YJL172W	MAL33	P38157	468 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	YSW1	P38280	609 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	REI1	P38344	393 aa	Predicted RBP	5.09	□□□□□ -1.59
CPS1	YJL172W	HSE1	P38753	452 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	RRF1	P38771	230 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	YJL070C	P40361	888 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	MNT3	P40549	630 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	SNZ3	P43545	298 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	VTC2	P43585	828 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	SSN8	P47821	323 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	FMS1	P50264	508 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	MAL13	P53338	473 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	SNZ2	P53824	298 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	ALD6	P54115	500 aa	Known RBP	5.09	□□□□□ -1.59
CPS1	YJL172W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
CPS1	YJL172W	RSA3	Q05942	220 aa	Known RBP	5.09	□□□□□ -1.59
CPS1	YJL172W	SGD1	Q06132	899 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	TY3A-G	Q12173	290 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	MCM16	Q12262	181 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	TY3A-I	Q99219	290 aa		5.09	□□□□□ -1.59
CPS1	YJL172W	SPS1	P08458	490 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	SUI3	P09064	285 aa	Known RBP	5.09	□□□□□ -1.6
CPS1	YJL172W	CDC6	P09119	513 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	ADH4	P10127	382 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	VAN1	P23642	535 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	VPH2	P32341	215 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	EUG1	P32474	517 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	UBC6	P33296	250 aa	Predicted RBP	5.09	□□□□□ -1.6
CPS1	YJL172W	PHO88	P38264	188 aa	Predicted RBP	5.09	□□□□□ -1.6
CPS1	YJL172W	RIM11	P38615	370 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	SIP3	P38717	1229 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	ERP5	P38819	212 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	MNN1	P39106	762 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	RLP7	P40693	322 aa	Known RBP	5.09	□□□□□ -1.6
CPS1	YJL172W	APS3	P47064	194 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	YGL138C	P53122	345 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	ALF1	P53904	254 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	FDC1	Q03034	503 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	GIS4	Q04233	774 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	GET3	Q12154	354 aa	Known RBP	5.09	□□□□□ -1.6
CPS1	YJL172W	MCD1	Q12158	566 aa		5.09	□□□□□ -1.6
CPS1	YJL172W	HXK1	P04806	485 aa	Known RBP	5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms