RNA–Protein interactions for RNA: YIL072W

HOP1, Transcript of Meiosis-specific protein required for chromosome synapsis, yeast

Gene HOP1, Length 1,818 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOP1	YIL072W	ECM38	Q05902	660 aa	Predicted RBP	3.59	□□□□□ -1.83
HOP1	YIL072W	RPN7	Q06103	429 aa	Known RBP	3.59	□□□□□ -1.83
HOP1	YIL072W	PRC1	P00729	532 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	PFK1	P16861	987 aa	Known RBP	3.58	□□□□□ -1.84
HOP1	YIL072W	PRP4	P20053	465 aa	Known RBP	3.58	□□□□□ -1.84
HOP1	YIL072W	CTF13	P35203	478 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	ECM1	P39715	212 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	SHR5	P41912	237 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	PUS2	P53167	370 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	LEE1	Q02799	301 aa	Known RBP	3.58	□□□□□ -1.84
HOP1	YIL072W	RRP6	Q12149	733 aa	Known RBP	3.58	□□□□□ -1.84
HOP1	YIL072W	NGG1	P32494	702 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	SAP190	P36123	1033 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	KTR4	P38131	464 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	YHL041W	P38730	149 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	SSZ1	P38788	538 aa	Known RBP	3.58	□□□□□ -1.84
HOP1	YIL072W	YHM2	Q04013	314 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	ASM4	Q05166	528 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	MLC2	Q06580	163 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	PUS9	Q12069	462 aa		3.58	□□□□□ -1.84
HOP1	YIL072W	MSS18	P08593	268 aa		3.57	□□□□□ -1.84
HOP1	YIL072W	MAL31	P38156	614 aa		3.57	□□□□□ -1.84
HOP1	YIL072W	CHS7	P38843	316 aa		3.57	□□□□□ -1.84
HOP1	YIL072W	SLD3	P53135	668 aa		3.57	□□□□□ -1.84
HOP1	YIL072W	BRE5	P53741	515 aa	Known RBP	3.57	□□□□□ -1.84
HOP1	YIL072W	VMS1	Q04311	632 aa	Known RBP	3.57	□□□□□ -1.84
HOP1	YIL072W	YPR027C	Q12079	277 aa		3.57	□□□□□ -1.84
HOP1	YIL072W	SWM1	Q12379	170 aa		3.57	□□□□□ -1.84
HOP1	YIL072W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
HOP1	YIL072W	TUB2	P02557	457 aa	Known RBP	3.56	□□□□□ -1.84
HOP1	YIL072W	SWI6	P09959	803 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	SEC65	P29478	273 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
HOP1	YIL072W	HIS6	P40545	261 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	YFL052W	P43551	465 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	YJR039W	P47107	1121 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	MSE1	P48525	536 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	PCL10	P53124	433 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	CEG1	Q01159	459 aa	Predicted RBP	3.56	□□□□□ -1.84
HOP1	YIL072W	PEX19	Q07418	342 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	PEX15	Q08215	383 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	ATG11	Q12527	1178 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	CDC26	P14724	124 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	EFT1	P32324	842 aa	Known RBP	3.56	□□□□□ -1.84
HOP1	YIL072W	YKU70	P32807	602 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	YKL133C	P36066	463 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	EXO84	P38261	753 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	MSS4	P38994	779 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	BEM4	P39011	633 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	EMP65	P40085	556 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	RPT2	P40327	437 aa	Known RBP	3.56	□□□□□ -1.84
HOP1	YIL072W	PTA1	Q01329	785 aa	Predicted RBP	3.56	□□□□□ -1.84
HOP1	YIL072W	NKP1	Q12493	238 aa		3.56	□□□□□ -1.84
HOP1	YIL072W	MIP6	P38760	659 aa	Known RBP	3.55	□□□□□ -1.84
HOP1	YIL072W	AIM21	P40563	679 aa		3.55	□□□□□ -1.84
HOP1	YIL072W	QRI7	P43122	407 aa		3.55	□□□□□ -1.84
HOP1	YIL072W	PHO23	P50947	330 aa		3.55	□□□□□ -1.84
HOP1	YIL072W	CNM67	P53865	581 aa	Known RBP	3.55	□□□□□ -1.84
HOP1	YIL072W	MUS81	Q04149	632 aa	Predicted RBP	3.55	□□□□□ -1.84
HOP1	YIL072W	AIM39	Q08223	395 aa		3.55	□□□□□ -1.84
HOP1	YIL072W	YLR415C	O13578	112 aa		3.54	□□□□□ -1.84
HOP1	YIL072W	GLN4	P13188	809 aa	Known RBP	3.54	□□□□□ -1.84
HOP1	YIL072W	HRR25	P29295	494 aa	Known RBP	3.54	□□□□□ -1.84
HOP1	YIL072W	DBF20	P32328	564 aa		3.54	□□□□□ -1.84
HOP1	YIL072W	AKL1	P38080	1108 aa	Known RBP	3.54	□□□□□ -1.84
HOP1	YIL072W	PZF1	P39933	429 aa		3.54	□□□□□ -1.84
HOP1	YIL072W	SSY5	P47002	699 aa		3.54	□□□□□ -1.84
HOP1	YIL072W	MRPS35	P53292	345 aa		3.54	□□□□□ -1.84
HOP1	YIL072W	RPA135	P22138	1203 aa	Known RBP	3.54	□□□□□ -1.84
HOP1	YIL072W	YBR259W	P38338	688 aa		3.54	□□□□□ -1.84
HOP1	YIL072W	RIM4	P38741	713 aa		3.54	□□□□□ -1.84
HOP1	YIL072W	PFA3	P42836	336 aa		3.54	□□□□□ -1.84
HOP1	YIL072W	AMA1	P50082	593 aa		3.54	□□□□□ -1.84
HOP1	YIL072W	MOT3	P54785	490 aa	Known RBP	3.54	□□□□□ -1.84
HOP1	YIL072W	PKH1	Q03407	766 aa		3.54	□□□□□ -1.84
HOP1	YIL072W	CIA1	Q05583	330 aa		3.54	□□□□□ -1.84
HOP1	YIL072W	YLR407W	Q06070	228 aa		3.54	□□□□□ -1.84
HOP1	YIL072W	BRE1	Q07457	700 aa	Known RBP	3.54	□□□□□ -1.84
HOP1	YIL072W	MET3	P08536	511 aa		3.53	□□□□□ -1.84
HOP1	YIL072W	HOP1	P20050	605 aa		3.53	□□□□□ -1.84
HOP1	YIL072W	HCA4	P20448	770 aa	Known RBP	3.53	□□□□□ -1.84
HOP1	YIL072W	DPB3	P27344	201 aa		3.53	□□□□□ -1.84
HOP1	YIL072W	RPP1	P38786	293 aa		3.53	□□□□□ -1.84
HOP1	YIL072W	ACA1	P39970	489 aa		3.53	□□□□□ -1.84
HOP1	YIL072W	EAF5	P39995	279 aa		3.53	□□□□□ -1.84
HOP1	YIL072W	VID27	P40157	782 aa		3.53	□□□□□ -1.84
HOP1	YIL072W	GID8	P40208	455 aa		3.53	□□□□□ -1.84
HOP1	YIL072W	VHR1	P40522	640 aa		3.53	□□□□□ -1.84
HOP1	YIL072W	VID28	P40547	921 aa		3.53	□□□□□ -1.84
HOP1	YIL072W	NOP15	P53927	220 aa	Predicted RBP	3.53	□□□□□ -1.84
HOP1	YIL072W	OMS1	Q06668	471 aa		3.53	□□□□□ -1.84
HOP1	YIL072W	YOL114C	Q12322	202 aa		3.53	□□□□□ -1.84
HOP1	YIL072W	ERG4	P25340	473 aa		3.52	□□□□□ -1.85
HOP1	YIL072W	HXT4	P32467	576 aa		3.52	□□□□□ -1.85
HOP1	YIL072W	YHR202W	P38887	602 aa		3.52	□□□□□ -1.85
HOP1	YIL072W	IES1	P43579	692 aa		3.52	□□□□□ -1.85
HOP1	YIL072W	IRC5	P43610	853 aa		3.52	□□□□□ -1.85
HOP1	YIL072W	RNR4	P49723	345 aa	Known RBP	3.52	□□□□□ -1.85
HOP1	YIL072W	CTF4	Q01454	927 aa		3.52	□□□□□ -1.85
HOP1	YIL072W	KIN4	Q01919	800 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms