RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C SLX5P32828 619 aaKnown RBP8.07□□□□□ -1.12
SNP1YIL061C TRM2P33753 639 aa8.07□□□□□ -1.12
SNP1YIL061C SMX2P40204 77 aaKnown RBP8.07□□□□□ -1.12
SNP1YIL061C RPL4BP49626 362 aaKnown RBP8.07□□□□□ -1.12
SNP1YIL061C YGL140CP53120 1219 aa8.07□□□□□ -1.12
SNP1YIL061C HOP2P53187 214 aa8.07□□□□□ -1.12
SNP1YIL061C MSC2Q03455 724 aa8.07□□□□□ -1.12
SNP1YIL061C SXM1Q04175 944 aaKnown RBP8.07□□□□□ -1.12
SNP1YIL061C YLR225CQ05948 407 aaKnown RBP8.07□□□□□ -1.12
SNP1YIL061C ATG11Q12527 1178 aa8.07□□□□□ -1.12
SNP1YIL061C GAL10P04397 699 aa8.06□□□□□ -1.12
SNP1YIL061C TUB3P09734 445 aaKnown RBP8.06□□□□□ -1.12
SNP1YIL061C YML002WP0CF17 737 aa8.06□□□□□ -1.12
SNP1YIL061C AFT1P22149 690 aa8.06□□□□□ -1.12
SNP1YIL061C GYP6P32806 458 aa8.06□□□□□ -1.12
SNP1YIL061C MRP4P32902 394 aa8.06□□□□□ -1.12
SNP1YIL061C YMC2P38087 329 aa8.06□□□□□ -1.12
SNP1YIL061C PBP2P38151 413 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
SNP1YIL061C YHR054CP38780 354 aa8.06□□□□□ -1.12
SNP1YIL061C CCT2P39076 527 aaKnown RBP8.06□□□□□ -1.12
SNP1YIL061C TMN3P40071 706 aa8.06□□□□□ -1.12
SNP1YIL061C YMR134WP40207 237 aa8.06□□□□□ -1.12
SNP1YIL061C INA22P40576 216 aa8.06□□□□□ -1.12
SNP1YIL061C SAD1P43589 448 aa8.06□□□□□ -1.12
SNP1YIL061C TPO2P53283 614 aa8.06□□□□□ -1.12
SNP1YIL061C IVY1Q04934 453 aa8.06□□□□□ -1.12
SNP1YIL061C FRA1Q07825 749 aa8.06□□□□□ -1.12
SNP1YIL061C SEY1Q99287 776 aa8.06□□□□□ -1.12
SNP1YIL061C RAD10P06838 210 aa8.05□□□□□ -1.12
SNP1YIL061C SNA3P14359 133 aa8.05□□□□□ -1.12
SNP1YIL061C GLN3P18494 730 aa8.05□□□□□ -1.12
SNP1YIL061C ILV6P25605 309 aaKnown RBP8.05□□□□□ -1.12
SNP1YIL061C SPT5P27692 1063 aaKnown RBP8.05□□□□□ -1.12
SNP1YIL061C MSS51P32335 436 aa8.05□□□□□ -1.12
SNP1YIL061C RPT1P33299 467 aaKnown RBP8.05□□□□□ -1.12
SNP1YIL061C SEG2P34250 1132 aa8.05□□□□□ -1.12
SNP1YIL061C OAF3P36023 863 aa8.05□□□□□ -1.12
SNP1YIL061C GPT2P36148 743 aa8.05□□□□□ -1.12
SNP1YIL061C VHC1P38329 1120 aa8.05□□□□□ -1.12
SNP1YIL061C PCA1P38360 1216 aa8.05□□□□□ -1.12
SNP1YIL061C SNZ3P43545 298 aa8.05□□□□□ -1.12
SNP1YIL061C YGL036WP53185 909 aaPredicted RBP8.05□□□□□ -1.12
SNP1YIL061C NOG2P53742 486 aaKnown RBP8.05□□□□□ -1.12
SNP1YIL061C SNZ2P53824 298 aa8.05□□□□□ -1.12
SNP1YIL061C GPD1Q00055 391 aaKnown RBP8.05□□□□□ -1.12
SNP1YIL061C USA1Q03714 838 aa8.05□□□□□ -1.12
SNP1YIL061C PNP1Q05788 311 aa8.05□□□□□ -1.12
SNP1YIL061C ACM1Q08981 209 aa8.05□□□□□ -1.12
SNP1YIL061C GCR1P07261 785 aa8.04□□□□□ -1.12
SNP1YIL061C SPO16P17122 198 aa8.04□□□□□ -1.12
SNP1YIL061C AEP2P22136 580 aa8.04□□□□□ -1.12
SNP1YIL061C VMA4P22203 233 aaKnown RBP8.04□□□□□ -1.12
SNP1YIL061C PRR1P28708 518 aa8.04□□□□□ -1.12
SNP1YIL061C RPC37P36121 282 aa8.04□□□□□ -1.12
SNP1YIL061C APM2P38700 605 aa8.04□□□□□ -1.12
SNP1YIL061C ETP1P38748 585 aaKnown RBP8.04□□□□□ -1.12
SNP1YIL061C QNS1P38795 714 aaKnown RBP8.04□□□□□ -1.12
SNP1YIL061C SSP1P38871 571 aa8.04□□□□□ -1.12
SNP1YIL061C TRS85P46944 698 aa8.04□□□□□ -1.12
SNP1YIL061C URB2P47108 1174 aa8.04□□□□□ -1.12
SNP1YIL061C ISM1P48526 1002 aa8.04□□□□□ -1.12
SNP1YIL061C INP52P50942 1183 aa8.04□□□□□ -1.12
SNP1YIL061C MND1P53102 219 aa8.04□□□□□ -1.12
SNP1YIL061C DOT1Q04089 582 aaKnown RBP8.04□□□□□ -1.12
SNP1YIL061C ICL2Q12031 575 aa8.04□□□□□ -1.12
SNP1YIL061C ECM29P38737 1868 aa8.03□□□□□ -1.12
SNP1YIL061C RPB2P08518 1224 aaKnown RBP8.03□□□□□ -1.12
SNP1YIL061C HEM15P16622 393 aa8.03□□□□□ -1.12
SNP1YIL061C CBF1P17106 351 aa8.03□□□□□ -1.12
SNP1YIL061C ADE2P21264 571 aaKnown RBP8.03□□□□□ -1.12
SNP1YIL061C TRX1P22217 103 aaKnown RBP8.03□□□□□ -1.12
SNP1YIL061C DBP1P24784 617 aaKnown RBP8.03□□□□□ -1.12
SNP1YIL061C YCR051WP25631 222 aa8.03□□□□□ -1.12
SNP1YIL061C GPI10P30777 616 aa8.03□□□□□ -1.12
SNP1YIL061C BCS1P32839 456 aa8.03□□□□□ -1.12
SNP1YIL061C NOP4P37838 685 aaKnown RBP8.03□□□□□ -1.12
SNP1YIL061C GDT1P38301 280 aaPredicted RBP8.03□□□□□ -1.12
SNP1YIL061C CBR1P38626 284 aaKnown RBP8.03□□□□□ -1.12
SNP1YIL061C PCM1P38628 557 aaKnown RBP8.03□□□□□ -1.12
SNP1YIL061C ARG2P40360 574 aa8.03□□□□□ -1.12
SNP1YIL061C TMA108P40462 946 aa8.03□□□□□ -1.12
SNP1YIL061C SKP2P42843 763 aa8.03□□□□□ -1.12
SNP1YIL061C YJL045WP47052 634 aa8.03□□□□□ -1.12
SNP1YIL061C YML6P51998 286 aa8.03□□□□□ -1.12
SNP1YIL061C ALT1P52893 592 aa8.03□□□□□ -1.12
SNP1YIL061C CPR6P53691 371 aaKnown RBP8.03□□□□□ -1.12
SNP1YIL061C DAK1P54838 584 aaKnown RBP8.03□□□□□ -1.12
SNP1YIL061C SHR3Q02774 210 aa8.03□□□□□ -1.12
SNP1YIL061C YMR102CQ03177 834 aa8.03□□□□□ -1.12
SNP1YIL061C KAP95Q06142 861 aaKnown RBP8.03□□□□□ -1.12
SNP1YIL061C YLR455WQ06188 304 aa8.03□□□□□ -1.12
SNP1YIL061C PIG1Q06216 648 aa8.03□□□□□ -1.12
SNP1YIL061C YOR059CQ08448 450 aaKnown RBP8.03□□□□□ -1.12
SNP1YIL061C YPR027CQ12079 277 aa8.03□□□□□ -1.12
SNP1YIL061C YDR018CQ12185 396 aa8.03□□□□□ -1.12
SNP1YIL061C PCD1Q12524 340 aa8.03□□□□□ -1.12
SNP1YIL061C LAA1P39526 2014 aa8.02□□□□□ -1.13
SNP1YIL061C CHS1P08004 1131 aa8.02□□□□□ -1.13
SNP1YIL061C PUT4P15380 627 aa8.02□□□□□ -1.13
SNP1YIL061C KAR3P17119 729 aa8.02□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms