RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	YLR464W	P0CX17	216 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	MSM1	P22438	575 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	ATG19	P35193	415 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	SDS22	P36047	338 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	SRP68	P38687	599 aa	Known RBP	5.28	□□□□□ -1.56
SNL1	YIL016W	MSS4	P38994	779 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	STL1	P39932	569 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	YEL076C	P39971	216 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	VHR1	P40522	640 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	PFA3	P42836	336 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	IRC5	P43610	853 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	EXG2	P52911	562 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	YBP2	P53169	641 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	PLB2	Q03674	706 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	ENT2	Q05785	613 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	VHS3	Q08438	674 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	SSP2	Q08646	371 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	UPC2	Q12151	913 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	YPR053C	Q6Q5F3	151 aa		5.28	□□□□□ -1.56
SNL1	YIL016W	ETP1	P38748	585 aa	Known RBP	5.27	□□□□□ -1.57
SNL1	YIL016W	BLS1	Q06071	122 aa		5.27	□□□□□ -1.57
SNL1	YIL016W	MCH5	Q08777	521 aa		5.27	□□□□□ -1.57
SNL1	YIL016W	GPR1	Q12361	961 aa		5.27	□□□□□ -1.57
SNL1	YIL016W	ADH4	P10127	382 aa		5.26	□□□□□ -1.57
SNL1	YIL016W	TGL1	P34163	548 aa		5.26	□□□□□ -1.57
SNL1	YIL016W	SHM2	P37291	469 aa	Known RBP	5.26	□□□□□ -1.57
SNL1	YIL016W	APM3	P38153	483 aa		5.26	□□□□□ -1.57
SNL1	YIL016W	IES1	P43579	692 aa		5.26	□□□□□ -1.57
SNL1	YIL016W	MAD3	P47074	515 aa		5.26	□□□□□ -1.57
SNL1	YIL016W	PRP31	P49704	494 aa	Predicted RBP	5.26	□□□□□ -1.57
SNL1	YIL016W	MTD1	Q02046	320 aa	Known RBP	5.26	□□□□□ -1.57
SNL1	YIL016W	CIA1	Q05583	330 aa		5.26	□□□□□ -1.57
SNL1	YIL016W	SWM1	Q12379	170 aa		5.26	□□□□□ -1.57
SNL1	YIL016W	ARP7	Q12406	477 aa		5.26	□□□□□ -1.57
SNL1	YIL016W	MCM10	P32354	571 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	MF(ALPHA)2	P32435	120 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	STE14	P32584	239 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	NOC2	P39744	710 aa	Known RBP	5.25	□□□□□ -1.57
SNL1	YIL016W	YNL195C	P40168	261 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	AIM21	P40563	679 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	GTR1	Q00582	310 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	PKH1	Q03407	766 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	TRS130	Q03660	1102 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	HLR1	Q04429	423 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	STP4	Q07351	490 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	ADY3	Q07732	790 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	YOR352W	Q08816	343 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	YOL087C	Q99247	1116 aa		5.25	□□□□□ -1.57
SNL1	YIL016W	SSM4	P40318	1319 aa		5.24	□□□□□ -1.57
SNL1	YIL016W	TRP3	P00937	484 aa		5.24	□□□□□ -1.57
SNL1	YIL016W	PYC1	P11154	1178 aa	Known RBP	5.24	□□□□□ -1.57
SNL1	YIL016W	PRP4	P20053	465 aa	Known RBP	5.24	□□□□□ -1.57
SNL1	YIL016W	ADE2	P21264	571 aa	Known RBP	5.24	□□□□□ -1.57
SNL1	YIL016W	CBP3	P21560	335 aa		5.24	□□□□□ -1.57
SNL1	YIL016W	LRG1	P35688	1017 aa		5.24	□□□□□ -1.57
SNL1	YIL016W	YHR033W	P38690	423 aa		5.24	□□□□□ -1.57
SNL1	YIL016W	SKN7	P38889	622 aa		5.24	□□□□□ -1.57
SNL1	YIL016W	URM1	P40554	99 aa	Predicted RBP	5.24	□□□□□ -1.57
SNL1	YIL016W	MET12	P46151	657 aa		5.24	□□□□□ -1.57
SNL1	YIL016W	COX18	P53239	316 aa		5.24	□□□□□ -1.57
SNL1	YIL016W	ASI2	P53895	289 aa		5.24	□□□□□ -1.57
SNL1	YIL016W	SGO1	Q08490	590 aa		5.24	□□□□□ -1.57
SNL1	YIL016W	RTK1	Q12100	620 aa	Predicted RBP	5.24	□□□□□ -1.57
SNL1	YIL016W	PSF3	Q12146	194 aa		5.24	□□□□□ -1.57
SNL1	YIL016W	KCS1	Q12494	1050 aa		5.24	□□□□□ -1.57
SNL1	YIL016W	VAS1	P07806	1104 aa	Known RBP	5.23	□□□□□ -1.57
SNL1	YIL016W	FRS1	P15624	595 aa	Known RBP	5.23	□□□□□ -1.57
SNL1	YIL016W	MPE1	P35728	441 aa	Known RBP	5.23	□□□□□ -1.57
SNL1	YIL016W	SWD1	P39706	426 aa		5.23	□□□□□ -1.57
SNL1	YIL016W	SPC72	P39723	622 aa		5.23	□□□□□ -1.57
SNL1	YIL016W	MNT3	P40549	630 aa		5.23	□□□□□ -1.57
SNL1	YIL016W	ARG5,6	Q01217	863 aa		5.23	□□□□□ -1.57
SNL1	YIL016W	RCR2	Q03446	210 aa	Known RBP	5.23	□□□□□ -1.57
SNL1	YIL016W	YLR415C	O13578	112 aa		5.22	□□□□□ -1.57
SNL1	YIL016W	HIS5	P07172	385 aa		5.22	□□□□□ -1.57
SNL1	YIL016W	NUC1	P08466	329 aa		5.22	□□□□□ -1.57
SNL1	YIL016W	TUB3	P09734	445 aa	Known RBP	5.22	□□□□□ -1.57
SNL1	YIL016W	GFA1	P14742	717 aa	Known RBP	5.22	□□□□□ -1.57
SNL1	YIL016W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	not detected
SNL1	YIL016W	CHS3	P29465	1165 aa		5.22	□□□□□ -1.57
SNL1	YIL016W	SEC21	P32074	935 aa	Known RBP	5.22	□□□□□ -1.57
SNL1	YIL016W	NGG1	P32494	702 aa		5.22	□□□□□ -1.57
SNL1	YIL016W	PET127	P32606	800 aa		5.22	□□□□□ -1.57
SNL1	YIL016W	PSY4	P38193	441 aa		5.22	□□□□□ -1.57
SNL1	YIL016W	PPE1	P38796	400 aa		5.22	□□□□□ -1.57
SNL1	YIL016W	ENP2	P48234	707 aa	Known RBP	5.22	□□□□□ -1.57
SNL1	YIL016W	YMR018W	Q04364	514 aa		5.22	□□□□□ -1.57
SNL1	YIL016W	SGD1	Q06132	899 aa		5.22	□□□□□ -1.57
SNL1	YIL016W	VPS36	Q06696	566 aa		5.22	□□□□□ -1.57
SNL1	YIL016W	NEW1	Q08972	1196 aa	Known RBP	5.22	□□□□□ -1.57
SNL1	YIL016W	YDR056C	Q12025	205 aa		5.22	□□□□□ -1.57
SNL1	YIL016W	IME1	P21190	360 aa		5.21	□□□□□ -1.58
SNL1	YIL016W	YHR112C	P38716	378 aa		5.21	□□□□□ -1.58
SNL1	YIL016W	LAM1	P38851	1228 aa		5.21	□□□□□ -1.58
SNL1	YIL016W	GID8	P40208	455 aa		5.21	□□□□□ -1.58
SNL1	YIL016W	IMA5	P40884	581 aa		5.21	□□□□□ -1.58
SNL1	YIL016W	MAD2	P40958	196 aa		5.21	□□□□□ -1.58
SNL1	YIL016W	BUD8	P41698	603 aa		5.21	□□□□□ -1.58
SNL1	YIL016W	SMK1	P41808	388 aa		5.21	□□□□□ -1.58
SNL1	YIL016W	PXA1	P41909	870 aa		5.21	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms