RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	not detected
URM1	YIL008W	GET2	P40056	285 aa		3.04	□□□□□ -1.92
URM1	YIL008W	NDC80	P40460	691 aa		3.04	□□□□□ -1.92
URM1	YIL008W	SET2	P46995	733 aa	Known RBP	3.04	□□□□□ -1.92
URM1	YIL008W	TAH11	P47112	604 aa		3.04	□□□□□ -1.92
URM1	YIL008W	ALG12	P53730	551 aa		3.04	□□□□□ -1.92
URM1	YIL008W	YNL193W	P53870	558 aa		3.04	□□□□□ -1.92
URM1	YIL008W	LEE1	Q02799	301 aa	Known RBP	3.04	□□□□□ -1.92
URM1	YIL008W	TFB2	Q02939	513 aa		3.04	□□□□□ -1.92
URM1	YIL008W	YLR001C	Q07895	862 aa		3.04	□□□□□ -1.92
URM1	YIL008W	SUT2	Q12286	268 aa		3.04	□□□□□ -1.92
URM1	YIL008W	ZRT2	Q12436	422 aa		3.04	□□□□□ -1.92
URM1	YIL008W	HCA4	P20448	770 aa	Known RBP	3.03	□□□□□ -1.92
URM1	YIL008W	PHO11	P35842	467 aa		3.03	□□□□□ -1.92
URM1	YIL008W	GLG1	P36143	616 aa		3.03	□□□□□ -1.92
URM1	YIL008W	AKL1	P38080	1108 aa	Known RBP	3.03	□□□□□ -1.92
URM1	YIL008W	PHO12	P38693	467 aa		3.03	□□□□□ -1.92
URM1	YIL008W	SSZ1	P38788	538 aa	Known RBP	3.03	□□□□□ -1.92
URM1	YIL008W	YJL206C	P39529	758 aa		3.03	□□□□□ -1.92
URM1	YIL008W	ARG2	P40360	574 aa		3.03	□□□□□ -1.92
URM1	YIL008W	NOP9	P47077	666 aa	Known RBP	3.03	□□□□□ -1.92
URM1	YIL008W	CTR1	P49573	406 aa		3.03	□□□□□ -1.92
URM1	YIL008W	MET13	P53128	600 aa		3.03	□□□□□ -1.92
URM1	YIL008W	COX18	P53239	316 aa		3.03	□□□□□ -1.92
URM1	YIL008W	FHN1	P53279	174 aa		3.03	□□□□□ -1.92
URM1	YIL008W	BRE5	P53741	515 aa	Known RBP	3.03	□□□□□ -1.92
URM1	YIL008W	ATG4	P53867	494 aa		3.03	□□□□□ -1.92
URM1	YIL008W	GPD1	Q00055	391 aa	Known RBP	3.03	□□□□□ -1.92
URM1	YIL008W	RGC1	Q06108	1083 aa	Known RBP	3.03	□□□□□ -1.92
URM1	YIL008W	DIA2	Q08496	732 aa	Predicted RBP	3.03	□□□□□ -1.92
URM1	YIL008W	MLH3	Q12083	715 aa		3.03	□□□□□ -1.92
URM1	YIL008W	TAF3	Q12297	353 aa		3.03	□□□□□ -1.92
URM1	YIL008W	CLF1	Q12309	687 aa	Predicted RBP	3.03	□□□□□ -1.92
URM1	YIL008W	UBS1	P38290	277 aa		3.02	□□□□□ -1.93
URM1	YIL008W	ATF1	P40353	525 aa		3.02	□□□□□ -1.93
URM1	YIL008W	CCT7	P42943	550 aa	Known RBP	3.02	□□□□□ -1.93
URM1	YIL008W	RSC8	P43609	557 aa	Known RBP	3.02	□□□□□ -1.93
URM1	YIL008W	YJR039W	P47107	1121 aa		3.02	□□□□□ -1.93
URM1	YIL008W	YML122C	Q03207	126 aa		3.02	□□□□□ -1.93
URM1	YIL008W	GUD1	Q07729	489 aa		3.02	□□□□□ -1.93
URM1	YIL008W	NOP14	Q99207	810 aa	Known RBP	3.02	□□□□□ -1.93
URM1	YIL008W	RPL8A	P17076	256 aa	Known RBP	3.01	□□□□□ -1.93
URM1	YIL008W	SFP1	P32432	683 aa		3.01	□□□□□ -1.93
URM1	YIL008W	PPZ2	P33329	710 aa		3.01	□□□□□ -1.93
URM1	YIL008W	CUE2	P36075	443 aa	Known RBP	3.01	□□□□□ -1.93
URM1	YIL008W	MAL31	P38156	614 aa		3.01	□□□□□ -1.93
URM1	YIL008W	YHR202W	P38887	602 aa		3.01	□□□□□ -1.93
URM1	YIL008W	MGS1	P40151	587 aa		3.01	□□□□□ -1.93
URM1	YIL008W	YNL195C	P40168	261 aa		3.01	□□□□□ -1.93
URM1	YIL008W	YIL166C	P40445	542 aa		3.01	□□□□□ -1.93
URM1	YIL008W	THI22	Q06490	572 aa		3.01	□□□□□ -1.93
URM1	YIL008W	ISA1	Q07821	250 aa	Predicted RBP	3.01	□□□□□ -1.93
URM1	YIL008W	DCS2	Q12123	353 aa		3.01	□□□□□ -1.93
URM1	YIL008W	ECM3	Q99252	613 aa		3.01	□□□□□ -1.93
URM1	YIL008W	THR1	P17423	357 aa	Known RBP	3	□□□□□ -1.93
URM1	YIL008W	PRP28	P23394	588 aa		3	□□□□□ -1.93
URM1	YIL008W	ILV6	P25605	309 aa	Known RBP	3	□□□□□ -1.93
URM1	YIL008W	BCS1	P32839	456 aa		3	□□□□□ -1.93
URM1	YIL008W	BIT2	P38346	545 aa		3	□□□□□ -1.93
URM1	YIL008W	NMD2	P38798	1089 aa	Known RBP	3	□□□□□ -1.93
URM1	YIL008W	MNN1	P39106	762 aa		3	□□□□□ -1.93
URM1	YIL008W	BDH2	P39713	417 aa		3	□□□□□ -1.93
URM1	YIL008W	PIG2	P40187	538 aa		3	□□□□□ -1.93
URM1	YIL008W	USV1	Q12132	391 aa		3	□□□□□ -1.93
URM1	YIL008W	NDJ1	Q12366	352 aa		3	□□□□□ -1.93
URM1	YIL008W	TUB1	P09733	447 aa	Known RBP	2.99	□□□□□ -1.93
URM1	YIL008W	SEC6	P32844	805 aa		2.99	□□□□□ -1.93
URM1	YIL008W	YKR075C	P36155	307 aa		2.99	□□□□□ -1.93
URM1	YIL008W	BEM4	P39011	633 aa		2.99	□□□□□ -1.93
URM1	YIL008W	NUG1	P40010	520 aa	Known RBP	2.99	□□□□□ -1.93
URM1	YIL008W	BFA1	P47113	574 aa		2.99	□□□□□ -1.93
URM1	YIL008W	SDA1	P53313	767 aa	Known RBP	2.99	□□□□□ -1.93
URM1	YIL008W	DNM1	P54861	757 aa		2.99	□□□□□ -1.93
URM1	YIL008W	APM1	Q00776	475 aa	Predicted RBP	2.99	□□□□□ -1.93
URM1	YIL008W	UTP14	Q04500	899 aa	Known RBP	2.99	□□□□□ -1.93
URM1	YIL008W	VHS3	Q08438	674 aa		2.99	□□□□□ -1.93
URM1	YIL008W	CHS5	Q12114	671 aa	Known RBP	2.99	□□□□□ -1.93
URM1	YIL008W	BNR1	P40450	1375 aa		2.99	□□□□□ -1.93
URM1	YIL008W	RPN13	O13563	156 aa		2.98	□□□□□ -1.93
URM1	YIL008W	ERG20	P08524	352 aa	Known RBP	2.98	□□□□□ -1.93
URM1	YIL008W	ABF1	P14164	731 aa		2.98	□□□□□ -1.93
URM1	YIL008W	FEN2	P25621	512 aa	Known RBP	2.98	□□□□□ -1.93
URM1	YIL008W	FUB1	P25659	250 aa		2.98	□□□□□ -1.93
URM1	YIL008W	EMP70	P32802	667 aa		2.98	□□□□□ -1.93
URM1	YIL008W	YPT7	P32939	208 aa		2.98	□□□□□ -1.93
URM1	YIL008W	SET3	P36124	751 aa		2.98	□□□□□ -1.93
URM1	YIL008W	GMH1	P36125	273 aa		2.98	□□□□□ -1.93
URM1	YIL008W	RIX1	P38883	763 aa	Predicted RBP	2.98	□□□□□ -1.93
URM1	YIL008W	YEL020C	P39994	560 aa		2.98	□□□□□ -1.93
URM1	YIL008W	YGR151C	P53287	111 aa		2.98	□□□□□ -1.93
URM1	YIL008W	LGE1	Q02796	332 aa	Known RBP	2.98	□□□□□ -1.93
URM1	YIL008W	VPS36	Q06696	566 aa		2.98	□□□□□ -1.93
URM1	YIL008W	POM34	Q12445	299 aa		2.98	□□□□□ -1.93
URM1	YIL008W	ADR1	P07248	1323 aa		2.97	□□□□□ -1.93
URM1	YIL008W	FRS1	P15624	595 aa	Known RBP	2.97	□□□□□ -1.93
URM1	YIL008W	SEC15	P22224	910 aa		2.97	□□□□□ -1.93
URM1	YIL008W	SPO11	P23179	398 aa		2.97	□□□□□ -1.93
URM1	YIL008W	ADY2	P25613	283 aa		2.97	□□□□□ -1.93
URM1	YIL008W	PET127	P32606	800 aa		2.97	□□□□□ -1.93
URM1	YIL008W	PEX2	P32800	271 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms