RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W STP1Q00947 519 aa2.06□□□□□ -2.08
CUL3YGR003W YLR125WQ12138 136 aa2.06□□□□□ -2.08
CUL3YGR003W SRD1P09007 221 aa2.05□□□□□ -2.08
CUL3YGR003W ALY2P47029 1046 aa2.05□□□□□ -2.08
CUL3YGR003W AIM14P53109 570 aa2.05□□□□□ -2.08
CUL3YGR003W YLR001CQ07895 862 aa2.05□□□□□ -2.08
CUL3YGR003W NEW1Q08972 1196 aaKnown RBP2.05□□□□□ -2.08
CUL3YGR003W TGL5Q12043 749 aa2.05□□□□□ -2.08
CUL3YGR003W YLR415CO13578 112 aa2.05□□□□□ -2.08
CUL3YGR003W RAD18P10862 487 aa2.05□□□□□ -2.08
CUL3YGR003W PYC1P11154 1178 aaKnown RBP2.05□□□□□ -2.08
CUL3YGR003W ERG6P25087 383 aaKnown RBP2.05□□□□□ -2.08
CUL3YGR003W PCL2P25693 308 aa2.05□□□□□ -2.08
CUL3YGR003W MUP3P38734 546 aa2.05□□□□□ -2.08
CUL3YGR003W CAF16P43569 289 aa2.05□□□□□ -2.08
CUL3YGR003W FMP30Q02883 468 aa2.05□□□□□ -2.08
CUL3YGR003W REH1Q06709 432 aa2.05□□□□□ -2.08
CUL3YGR003W ATG11Q12527 1178 aa2.05□□□□□ -2.08
CUL3YGR003W DIF1O13577 133 aa2.04□□□□□ -2.08
CUL3YGR003W HMG1P12683 1054 aa2.04□□□□□ -2.08
CUL3YGR003W RPA135P22138 1203 aaKnown RBP2.04□□□□□ -2.08
CUL3YGR003W CCR4P31384 837 aaKnown RBP2.04□□□□□ -2.08
CUL3YGR003W PEX6P33760 1030 aa2.04□□□□□ -2.08
CUL3YGR003W CCT4P39078 528 aaKnown RBP2.04□□□□□ -2.08
CUL3YGR003W SHR5P41912 237 aa2.04□□□□□ -2.08
CUL3YGR003W YKL033W-AQ86ZR7 236 aa2.04□□□□□ -2.08
CUL3YGR003W SIR3P06701 978 aa2.03□□□□□ -2.08
CUL3YGR003W SIC1P38634 284 aa2.03□□□□□ -2.08
CUL3YGR003W TEX1P53851 422 aaKnown RBP2.03□□□□□ -2.08
CUL3YGR003W ADE2P21264 571 aaKnown RBP2.03□□□□□ -2.08
CUL3YGR003W STO1P34160 861 aaKnown RBP2.03□□□□□ -2.08
CUL3YGR003W YHR112CP38716 378 aa2.03□□□□□ -2.08
CUL3YGR003W LYS9P38999 446 aa2.03□□□□□ -2.08
CUL3YGR003W IRC8P47046 822 aa2.03□□□□□ -2.08
CUL3YGR003W ATG33Q06485 197 aa2.03□□□□□ -2.08
CUL3YGR003W RPL8AP17076 256 aaKnown RBP2.02□□□□□ -2.09
CUL3YGR003W HOG1P32485 435 aa2.02□□□□□ -2.09
CUL3YGR003W PCM1P38628 557 aaKnown RBP2.02□□□□□ -2.09
CUL3YGR003W MTR3P48240 250 aaPredicted RBP2.02□□□□□ -2.09
CUL3YGR003W BRE5P53741 515 aaKnown RBP2.02□□□□□ -2.09
CUL3YGR003W SNP1Q00916 300 aaPredicted RBP2.02□□□□□ -2.09
CUL3YGR003W TFB2Q02939 513 aa2.02□□□□□ -2.09
CUL3YGR003W UGO1Q03327 502 aa2.02□□□□□ -2.09
CUL3YGR003W SFL1P20134 766 aa2.02□□□□□ -2.09
CUL3YGR003W MNN4P36044 1178 aa2.02□□□□□ -2.09
CUL3YGR003W YNL195CP40168 261 aa2.02□□□□□ -2.09
CUL3YGR003W ULP2P40537 1034 aaPredicted RBP2.02□□□□□ -2.09
CUL3YGR003W BAP3P41815 604 aa2.02□□□□□ -2.09
CUL3YGR003W BNA2P47125 453 aa2.02□□□□□ -2.09
CUL3YGR003W ZDS1P50111 915 aaKnown RBP2.02□□□□□ -2.09
CUL3YGR003W MET13P53128 600 aa2.02□□□□□ -2.09
CUL3YGR003W MTL1P53214 551 aa2.02□□□□□ -2.09
CUL3YGR003W ATG4P53867 494 aa2.02□□□□□ -2.09
CUL3YGR003W DNM1P54861 757 aa2.02□□□□□ -2.09
CUL3YGR003W FPR4Q06205 392 aaPredicted RBP2.02□□□□□ -2.09
CUL3YGR003W HRP1Q99383 534 aaKnown RBP2.02□□□□□ -2.09
CUL3YGR003W PPG1P32838 368 aa2.01□□□□□ -2.09
CUL3YGR003W MIP6P38760 659 aaKnown RBP2.01□□□□□ -2.09
CUL3YGR003W MNN1P39106 762 aa2.01□□□□□ -2.09
CUL3YGR003W GET2P40056 285 aa2.01□□□□□ -2.09
CUL3YGR003W NPY1P53164 384 aa2.01□□□□□ -2.09
CUL3YGR003W NHX1Q04121 633 aa2.01□□□□□ -2.09
CUL3YGR003W RRP14P36080 434 aaKnown RBP2.01□□□□□ -2.09
CUL3YGR003W PRP31P49704 494 aaPredicted RBP2.01□□□□□ -2.09
CUL3YGR003W PAN2P53010 1115 aaPredicted RBP2.01□□□□□ -2.09
CUL3YGR003W ARG5,6Q01217 863 aa2.01□□□□□ -2.09
CUL3YGR003W RPN7Q06103 429 aaKnown RBP2.01□□□□□ -2.09
CUL3YGR003W MLH3Q12083 715 aa2.01□□□□□ -2.09
CUL3YGR003W DCS2Q12123 353 aa2.01□□□□□ -2.09
CUL3YGR003W YKR018CP36114 725 aa2□□□□□ -2.09
CUL3YGR003W FMO1P38866 432 aa2□□□□□ -2.09
CUL3YGR003W CCT3P39077 534 aaKnown RBP2□□□□□ -2.09
CUL3YGR003W PSA1P41940 361 aaKnown RBP2□□□□□ -2.09
CUL3YGR003W YFL052WP43551 465 aa2□□□□□ -2.09
CUL3YGR003W YNL193WP53870 558 aa2□□□□□ -2.09
CUL3YGR003W NOP14Q99207 810 aaKnown RBP2□□□□□ -2.09
CUL3YGR003W GSY1P23337 708 aa1.99□□□□□ -2.09
CUL3YGR003W HSL7P38274 827 aa1.99□□□□□ -2.09
CUL3YGR003W SFB3P38810 929 aa1.99□□□□□ -2.09
CUL3YGR003W MGS1P40151 587 aa1.99□□□□□ -2.09
CUL3YGR003W GID8P40208 455 aa1.99□□□□□ -2.09
CUL3YGR003W YJR142WP47173 342 aa1.99□□□□□ -2.09
CUL3YGR003W PCL10P53124 433 aa1.99□□□□□ -2.09
CUL3YGR003W HMO1Q03973 246 aaKnown RBP1.99□□□□□ -2.09
CUL3YGR003W ADR1P07248 1323 aa1.99□□□□□ -2.09
CUL3YGR003W ADE5,7P07244 802 aaKnown RBP1.99□□□□□ -2.09
CUL3YGR003W YBR259WP38338 688 aa1.99□□□□□ -2.09
CUL3YGR003W SSZ1P38788 538 aaKnown RBP1.99□□□□□ -2.09
CUL3YGR003W RPN10P38886 268 aaKnown RBP1.99□□□□□ -2.09
CUL3YGR003W NUG1P40010 520 aaKnown RBP1.99□□□□□ -2.09
CUL3YGR003W TAX4P47030 604 aa1.99□□□□□ -2.09
CUL3YGR003W GPG1P53130 126 aa1.99□□□□□ -2.09
CUL3YGR003W POB3Q04636 552 aaKnown RBP1.99□□□□□ -2.09
CUL3YGR003W GIN4Q12263 1142 aa1.99□□□□□ -2.09
CUL3YGR003W RNR1P21524 888 aaKnown RBP1.98□□□□□ -2.09
CUL3YGR003W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
CUL3YGR003W OSW7P43611 510 aa1.98□□□□□ -2.09
CUL3YGR003W NOP9P47077 666 aaKnown RBP1.98□□□□□ -2.09
CUL3YGR003W RCR2Q03446 210 aaKnown RBP1.98□□□□□ -2.09
CUL3YGR003W GAD1Q04792 585 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms