RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C REV7P38927 245 aa4.47□□□□□ -1.69
PGD1YGL025C QRI1P43123 477 aaKnown RBP4.47□□□□□ -1.69
PGD1YGL025C NOP9P47077 666 aaKnown RBP4.47□□□□□ -1.69
PGD1YGL025C PAN2P53010 1115 aaPredicted RBP4.47□□□□□ -1.69
PGD1YGL025C MVD1P32377 396 aaKnown RBP4.46□□□□□ -1.7
PGD1YGL025C SFB3P38810 929 aa4.46□□□□□ -1.7
PGD1YGL025C YNL195CP40168 261 aa4.46□□□□□ -1.7
PGD1YGL025C SDA1P53313 767 aaKnown RBP4.46□□□□□ -1.7
PGD1YGL025C UTP14Q04500 899 aaKnown RBP4.46□□□□□ -1.7
PGD1YGL025C MRH1Q12117 320 aaPredicted RBP4.46□□□□□ -1.7
PGD1YGL025C YKL033W-AQ86ZR7 236 aa4.46□□□□□ -1.7
PGD1YGL025C PYC1P11154 1178 aaKnown RBP4.45□□□□□ -1.7
PGD1YGL025C PEX1P24004 1043 aa4.45□□□□□ -1.7
PGD1YGL025C BEM4P39011 633 aa4.45□□□□□ -1.7
PGD1YGL025C NUG1P40010 520 aaKnown RBP4.45□□□□□ -1.7
PGD1YGL025C YJR142WP47173 342 aa4.45□□□□□ -1.7
PGD1YGL025C FHN1P53279 174 aa4.45□□□□□ -1.7
PGD1YGL025C YAP1802P53309 568 aa4.45□□□□□ -1.7
PGD1YGL025C SMX3P54999 86 aaPredicted RBP4.45□□□□□ -1.7
PGD1YGL025C SSL2Q00578 843 aa4.45□□□□□ -1.7
PGD1YGL025C MLH3Q12083 715 aa4.45□□□□□ -1.7
PGD1YGL025C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
PGD1YGL025C ECM3Q99252 613 aa4.45□□□□□ -1.7
PGD1YGL025C YPT7P32939 208 aa4.44□□□□□ -1.7
PGD1YGL025C PHO11P35842 467 aa4.44□□□□□ -1.7
PGD1YGL025C UBS1P38290 277 aa4.44□□□□□ -1.7
PGD1YGL025C CBR1P38626 284 aaKnown RBP4.44□□□□□ -1.7
PGD1YGL025C PHO12P38693 467 aa4.44□□□□□ -1.7
PGD1YGL025C CRP1P38845 465 aaKnown RBP4.44□□□□□ -1.7
PGD1YGL025C YHR202WP38887 602 aa4.44□□□□□ -1.7
PGD1YGL025C RSC8P43609 557 aaKnown RBP4.44□□□□□ -1.7
PGD1YGL025C STU2P46675 888 aa4.44□□□□□ -1.7
PGD1YGL025C YJR096WP47137 282 aa4.44□□□□□ -1.7
PGD1YGL025C COX18P53239 316 aa4.44□□□□□ -1.7
PGD1YGL025C SEC6P32844 805 aa4.43□□□□□ -1.7
PGD1YGL025C CKB2P38930 258 aa4.43□□□□□ -1.7
PGD1YGL025C GPD1Q00055 391 aaKnown RBP4.43□□□□□ -1.7
PGD1YGL025C THI22Q06490 572 aa4.43□□□□□ -1.7
PGD1YGL025C ISA1Q07821 250 aaPredicted RBP4.43□□□□□ -1.7
PGD1YGL025C THI73Q07904 523 aa4.43□□□□□ -1.7
PGD1YGL025C SUT2Q12286 268 aa4.43□□□□□ -1.7
PGD1YGL025C ZRT2Q12436 422 aa4.43□□□□□ -1.7
PGD1YGL025C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
PGD1YGL025C MAL31P38156 614 aa4.42□□□□□ -1.7
PGD1YGL025C NDC80P40460 691 aa4.42□□□□□ -1.7
PGD1YGL025C CCT7P42943 550 aaKnown RBP4.42□□□□□ -1.7
PGD1YGL025C HLJ1P48353 224 aa4.42□□□□□ -1.7
PGD1YGL025C YNR029CP53729 429 aaKnown RBP4.42□□□□□ -1.7
PGD1YGL025C VPS36Q06696 566 aa4.42□□□□□ -1.7
PGD1YGL025C THR1P17423 357 aaKnown RBP4.41□□□□□ -1.7
PGD1YGL025C IMG2P25642 146 aaPredicted RBP4.41□□□□□ -1.7
PGD1YGL025C BCS1P32839 456 aa4.41□□□□□ -1.7
PGD1YGL025C TYS1P36421 394 aaKnown RBP4.41□□□□□ -1.7
PGD1YGL025C RET2P43621 546 aa4.41□□□□□ -1.7
PGD1YGL025C MTQ2Q03920 221 aaPredicted RBP4.41□□□□□ -1.7
PGD1YGL025C TAF3Q12297 353 aa4.41□□□□□ -1.7
PGD1YGL025C KIN3P22209 435 aa4.4□□□□□ -1.71
PGD1YGL025C PRP19P32523 503 aaKnown RBP4.4□□□□□ -1.71
PGD1YGL025C BIT2P38346 545 aa4.4□□□□□ -1.71
PGD1YGL025C TDA3P38758 523 aa4.4□□□□□ -1.71
PGD1YGL025C FPR3P38911 411 aaKnown RBP4.4□□□□□ -1.71
PGD1YGL025C VPS73P53142 486 aaKnown RBP4.4□□□□□ -1.71
PGD1YGL025C ATG4P53867 494 aa4.4□□□□□ -1.71
PGD1YGL025C YLR407WQ06070 228 aa4.4□□□□□ -1.71
PGD1YGL025C VHS3Q08438 674 aa4.4□□□□□ -1.71
PGD1YGL025C DIA2Q08496 732 aaPredicted RBP4.4□□□□□ -1.71
PGD1YGL025C YKU70P32807 602 aa4.39□□□□□ -1.71
PGD1YGL025C TDP1P38319 544 aa4.39□□□□□ -1.71
PGD1YGL025C YJL206CP39529 758 aa4.39□□□□□ -1.71
PGD1YGL025C CCT5P40413 562 aaKnown RBP4.39□□□□□ -1.71
PGD1YGL025C TAH11P47112 604 aa4.39□□□□□ -1.71
PGD1YGL025C GPG1P53130 126 aa4.39□□□□□ -1.71
PGD1YGL025C GIS1Q03833 894 aa4.39□□□□□ -1.71
PGD1YGL025C CLF1Q12309 687 aaPredicted RBP4.39□□□□□ -1.71
PGD1YGL025C YGR161W-CQ3E744 92 aa4.39□□□□□ -1.71
PGD1YGL025C RPS21BQ3E754 87 aaKnown RBP4.39□□□□□ -1.71
PGD1YGL025C SWI6P09959 803 aa4.38□□□□□ -1.71
PGD1YGL025C FRS1P15624 595 aaKnown RBP4.38□□□□□ -1.71
PGD1YGL025C CDC43P18898 376 aa4.38□□□□□ -1.71
PGD1YGL025C FEN2P25621 512 aaKnown RBP4.38□□□□□ -1.71
PGD1YGL025C PET127P32606 800 aa4.38□□□□□ -1.71
PGD1YGL025C SET3P36124 751 aa4.38□□□□□ -1.71
PGD1YGL025C HXT6P39003 570 aaKnown RBP4.38□□□□□ -1.71
PGD1YGL025C HXT7P39004 570 aa4.38□□□□□ -1.71
PGD1YGL025C PIG2P40187 538 aa4.38□□□□□ -1.71
PGD1YGL025C ARG2P40360 574 aa4.38□□□□□ -1.71
PGD1YGL025C BIT61P47041 543 aa4.38□□□□□ -1.71
PGD1YGL025C PMT3P47190 753 aa4.38□□□□□ -1.71
PGD1YGL025C CTR1P49573 406 aa4.38□□□□□ -1.71
PGD1YGL025C DOS2P54858 310 aa4.38□□□□□ -1.71
PGD1YGL025C ECM9Q02202 377 aa4.38□□□□□ -1.71
PGD1YGL025C UME1Q03010 460 aa4.38□□□□□ -1.71
PGD1YGL025C RCR2Q03446 210 aaKnown RBP4.38□□□□□ -1.71
PGD1YGL025C YMR210WQ03649 449 aa4.38□□□□□ -1.71
PGD1YGL025C YPS7Q06325 596 aa4.38□□□□□ -1.71
PGD1YGL025C USV1Q12132 391 aa4.38□□□□□ -1.71
PGD1YGL025C POM34Q12445 299 aa4.38□□□□□ -1.71
PGD1YGL025C IME1P21190 360 aa4.37□□□□□ -1.71
PGD1YGL025C PRP28P23394 588 aa4.37□□□□□ -1.71
PGD1YGL025C GLG1P36143 616 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms