RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C KIP2P28743 706 aa12.56□□□□□ -0.4
SCC4YER147C TPS2P31688 896 aaKnown RBP12.56□□□□□ -0.4
SCC4YER147C MVD1P32377 396 aaKnown RBP12.56□□□□□ -0.4
SCC4YER147C YBR032WP38223 100 aa12.56□□□□□ -0.4
SCC4YER147C YEL025CP39991 1188 aa12.56□□□□□ -0.4
SCC4YER147C EAF5P39995 279 aa12.56□□□□□ -0.4
SCC4YER147C PUS2P53167 370 aa12.56□□□□□ -0.4
SCC4YER147C CUL3P53202 744 aa12.56□□□□□ -0.4
SCC4YER147C YDR090CQ03193 310 aa12.56□□□□□ -0.4
SCC4YER147C YLR278CQ05854 1341 aa12.56□□□□□ -0.4
SCC4YER147C VMA2P16140 517 aaKnown RBP12.55□□□□□ -0.4
SCC4YER147C MGT1P26188 188 aa12.55□□□□□ -0.4
SCC4YER147C RIM101P33400 625 aa12.55□□□□□ -0.4
SCC4YER147C SCD6P45978 349 aaKnown RBP RIP-Chip data12.55□□□□□ -0.4not detected
SCC4YER147C VPS72Q03388 795 aa12.55□□□□□ -0.4
SCC4YER147C YER152CP10356 443 aa12.55□□□□□ -0.4
SCC4YER147C PDR1P12383 1068 aa12.55□□□□□ -0.4
SCC4YER147C TMT1P32643 299 aa12.55□□□□□ -0.4
SCC4YER147C DUG2P38149 878 aa12.55□□□□□ -0.4
SCC4YER147C APM2P38700 605 aa12.55□□□□□ -0.4
SCC4YER147C ALA1P40825 983 aaKnown RBP12.55□□□□□ -0.4
SCC4YER147C RGD2P43556 714 aa12.55□□□□□ -0.4
SCC4YER147C TFB2Q02939 513 aa12.55□□□□□ -0.4
SCC4YER147C ALR1Q08269 859 aa12.55□□□□□ -0.4
SCC4YER147C ABP140Q08641 628 aaKnown RBP12.55□□□□□ -0.4
SCC4YER147C YDR018CQ12185 396 aa12.55□□□□□ -0.4
SCC4YER147C EST1P17214 699 aaPredicted RBP12.54□□□□□ -0.4
SCC4YER147C RRT12P25381 491 aa12.54□□□□□ -0.4
SCC4YER147C RTG2P32608 588 aaKnown RBP12.54□□□□□ -0.4
SCC4YER147C SPC97P38863 823 aa12.54□□□□□ -0.4
SCC4YER147C GPB2P39717 880 aa12.54□□□□□ -0.4
SCC4YER147C RSM26P47141 266 aa12.54□□□□□ -0.4
SCC4YER147C GPI13Q07830 1017 aa12.54□□□□□ -0.4
SCC4YER147C VHS3Q08438 674 aa12.54□□□□□ -0.4
SCC4YER147C YOR059CQ08448 450 aaKnown RBP12.54□□□□□ -0.4
SCC4YER147C CDC19P00549 500 aaKnown RBP12.53□□□□□ -0.4
SCC4YER147C KIN82P25341 720 aa12.53□□□□□ -0.4
SCC4YER147C CBR1P38626 284 aaKnown RBP12.53□□□□□ -0.4
SCC4YER147C RIO2P40160 425 aaKnown RBP12.53□□□□□ -0.4
SCC4YER147C EMW1P42842 904 aaKnown RBP12.53□□□□□ -0.4
SCC4YER147C YGR125WP53273 1036 aa12.53□□□□□ -0.4
SCC4YER147C YNL040WP53960 456 aaPredicted RBP12.53□□□□□ -0.4
SCC4YER147C KAR4P25583 335 aa12.53□□□□□ -0.4
SCC4YER147C PEX2P32800 271 aa12.53□□□□□ -0.4
SCC4YER147C SET3P36124 751 aa12.53□□□□□ -0.4
SCC4YER147C PAM1P37304 830 aaKnown RBP12.53□□□□□ -0.4
SCC4YER147C HSM3P38348 480 aa12.53□□□□□ -0.4
SCC4YER147C PRM6Q04705 352 aa12.53□□□□□ -0.4
SCC4YER147C VAN1P23642 535 aa12.52□□□□□ -0.41
SCC4YER147C VPS29P38759 282 aa12.52□□□□□ -0.41
SCC4YER147C YAF9P53930 226 aa12.52□□□□□ -0.41
SCC4YER147C HOT1Q03213 719 aa12.52□□□□□ -0.41
SCC4YER147C SLD5Q03406 294 aa12.52□□□□□ -0.41
SCC4YER147C DPH2P32461 534 aa12.51□□□□□ -0.41
SCC4YER147C STE13P33894 931 aa12.51□□□□□ -0.41
SCC4YER147C YBP1P38315 674 aa12.51□□□□□ -0.41
SCC4YER147C ARG2P40360 574 aa12.51□□□□□ -0.41
SCC4YER147C MKT1P40850 830 aaKnown RBP12.51□□□□□ -0.41
SCC4YER147C HOP2P53187 214 aa12.51□□□□□ -0.41
SCC4YER147C TRS130Q03660 1102 aa12.51□□□□□ -0.41
SCC4YER147C CDC73Q06697 393 aa12.51□□□□□ -0.41
SCC4YER147C TY4A-HQ6Q5P6 413 aa12.51□□□□□ -0.41
SCC4YER147C TRX1P22217 103 aaKnown RBP12.51□□□□□ -0.41
SCC4YER147C EFT1P32324 842 aaKnown RBP12.51□□□□□ -0.41
SCC4YER147C IRE1P32361 1115 aa12.51□□□□□ -0.41
SCC4YER147C MRE11P32829 692 aa12.51□□□□□ -0.41
SCC4YER147C TMA108P40462 946 aa12.51□□□□□ -0.41
SCC4YER147C HLJ1P48353 224 aa12.51□□□□□ -0.41
SCC4YER147C TAF6P53040 516 aa12.51□□□□□ -0.41
SCC4YER147C KTR5P53966 522 aaPredicted RBP12.51□□□□□ -0.41
SCC4YER147C MSH6Q03834 1242 aa12.51□□□□□ -0.41
SCC4YER147C SXM1Q04175 944 aaKnown RBP12.51□□□□□ -0.41
SCC4YER147C GNT1Q12096 491 aa12.51□□□□□ -0.41
SCC4YER147C CDC24P11433 854 aaPredicted RBP12.5□□□□□ -0.41
SCC4YER147C VID24P38263 362 aa12.5□□□□□ -0.41
SCC4YER147C PCM1P38628 557 aaKnown RBP12.5□□□□□ -0.41
SCC4YER147C KHA1P40309 873 aa12.5□□□□□ -0.41
SCC4YER147C ECM7Q06200 448 aa12.5□□□□□ -0.41
SCC4YER147C OSW1Q08692 278 aa12.5□□□□□ -0.41
SCC4YER147C FAP7Q12055 197 aaPredicted RBP12.5□□□□□ -0.41
SCC4YER147C EFB1P32471 206 aaKnown RBP12.49□□□□□ -0.41
SCC4YER147C DBP7P36120 742 aaKnown RBP12.49□□□□□ -0.41
SCC4YER147C MSR1P38714 643 aa12.49□□□□□ -0.41
SCC4YER147C YJL045WP47052 634 aa12.49□□□□□ -0.41
SCC4YER147C NNF2P53253 936 aa12.49□□□□□ -0.41
SCC4YER147C THI7Q05998 598 aa12.49□□□□□ -0.41
SCC4YER147C KAP95Q06142 861 aaKnown RBP12.49□□□□□ -0.41
SCC4YER147C SHS1Q07657 551 aa12.49□□□□□ -0.41
SCC4YER147C PUS1Q12211 544 aaKnown RBP12.49□□□□□ -0.41
SCC4YER147C RAD3P06839 778 aa12.48□□□□□ -0.41
SCC4YER147C YMR085WP0CF18 432 aa12.48□□□□□ -0.41
SCC4YER147C MMS4P38257 691 aa12.48□□□□□ -0.41
SCC4YER147C LIN1P38852 340 aaPredicted RBP12.48□□□□□ -0.41
SCC4YER147C SNZ3P43545 298 aa12.48□□□□□ -0.41
SCC4YER147C SAE2P46946 345 aa12.48□□□□□ -0.41
SCC4YER147C YJR142WP47173 342 aa12.48□□□□□ -0.41
SCC4YER147C SNZ2P53824 298 aa12.48□□□□□ -0.41
SCC4YER147C GPD1Q00055 391 aaKnown RBP12.48□□□□□ -0.41
SCC4YER147C LCB5Q06147 687 aaKnown RBP12.48□□□□□ -0.41
SCC4YER147C ILS1P09436 1072 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 97.7 ms