RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W YJR054WP47114 497 aa10.06□□□□□ -0.8
SED1YDR077W ALT2P52892 507 aa10.06□□□□□ -0.8
SED1YDR077W ALT1P52893 592 aa10.06□□□□□ -0.8
SED1YDR077W NOP13P53883 403 aaKnown RBP RIP-Chip data10.06□□□□□ -0.8not detected
SED1YDR077W MUK1Q02866 612 aa10.06□□□□□ -0.8
SED1YDR077W YBL055CP34220 418 aaPredicted RBP10.05□□□□□ -0.8
SED1YDR077W NOP4P37838 685 aaKnown RBP10.05□□□□□ -0.8
SED1YDR077W TBS1P38114 1094 aa10.05□□□□□ -0.8
SED1YDR077W YER186CP40101 306 aa10.05□□□□□ -0.8
SED1YDR077W RIM8P53179 542 aa10.05□□□□□ -0.8
SED1YDR077W GYL1Q04322 720 aa10.05□□□□□ -0.8
SED1YDR077W DNL4Q08387 944 aaPredicted RBP10.05□□□□□ -0.8
SED1YDR077W ADE3P07245 946 aaKnown RBP10.04□□□□□ -0.8
SED1YDR077W PMS1P14242 873 aa10.04□□□□□ -0.8
SED1YDR077W ABD1P32783 436 aaPredicted RBP10.04□□□□□ -0.8
SED1YDR077W YMC2P38087 329 aa10.04□□□□□ -0.8
SED1YDR077W INP51P40559 946 aaKnown RBP10.04□□□□□ -0.8
SED1YDR077W PUS2P53167 370 aa10.04□□□□□ -0.8
SED1YDR077W YGR130CP53278 816 aa10.04□□□□□ -0.8
SED1YDR077W GPD1Q00055 391 aaKnown RBP10.04□□□□□ -0.8
SED1YDR077W YMR187CQ03236 431 aa10.04□□□□□ -0.8
SED1YDR077W IVY1Q04934 453 aa10.04□□□□□ -0.8
SED1YDR077W YPR027CQ12079 277 aa10.04□□□□□ -0.8
SED1YDR077W JIP3O13555 125 aa10.03□□□□□ -0.8
SED1YDR077W BI2P03873 423 aa10.03□□□□□ -0.8
SED1YDR077W BI4P03879 638 aa10.03□□□□□ -0.8
SED1YDR077W FUB1P25659 250 aa10.03□□□□□ -0.8
SED1YDR077W TIF5P38431 405 aaKnown RBP10.03□□□□□ -0.8
SED1YDR077W END3P39013 349 aa10.03□□□□□ -0.8
SED1YDR077W GEM1P39722 662 aa10.03□□□□□ -0.8
SED1YDR077W ASG1P40467 964 aa10.03□□□□□ -0.8
SED1YDR077W MVP1P40959 511 aaKnown RBP10.03□□□□□ -0.8
SED1YDR077W ZAP1P47043 880 aa10.03□□□□□ -0.8
SED1YDR077W GCV2P49095 1034 aa10.03□□□□□ -0.8
SED1YDR077W YGL036WP53185 909 aaPredicted RBP10.03□□□□□ -0.8
SED1YDR077W MTG1Q03151 367 aaPredicted RBP10.03□□□□□ -0.8
SED1YDR077W MZM1Q03429 123 aaPredicted RBP10.03□□□□□ -0.8
SED1YDR077W SNU56Q03782 492 aaKnown RBP10.03□□□□□ -0.8
SED1YDR077W UFO1Q04511 668 aa10.03□□□□□ -0.8
SED1YDR077W TDA9Q04545 1251 aa10.03□□□□□ -0.8
SED1YDR077W CTF3Q12748 733 aa10.03□□□□□ -0.8
SED1YDR077W YKL068W-AQ3E826 78 aa10.03□□□□□ -0.8
SED1YDR077W BI3Q9ZZW7 517 aa10.03□□□□□ -0.8
SED1YDR077W PDR1P12383 1068 aa10.02□□□□□ -0.81
SED1YDR077W KAR3P17119 729 aa10.02□□□□□ -0.81
SED1YDR077W UIP5P36137 443 aa10.02□□□□□ -0.81
SED1YDR077W LDH1P38139 375 aa10.02□□□□□ -0.81
SED1YDR077W SPP381P38282 291 aaPredicted RBP10.02□□□□□ -0.81
SED1YDR077W UBX7P38349 436 aa10.02□□□□□ -0.81
SED1YDR077W MMS21P38632 267 aa10.02□□□□□ -0.81
SED1YDR077W APM2P38700 605 aa10.02□□□□□ -0.81
SED1YDR077W TMN3P40071 706 aa10.02□□□□□ -0.81
SED1YDR077W MND1P53102 219 aa10.02□□□□□ -0.81
SED1YDR077W NOG2P53742 486 aaKnown RBP10.02□□□□□ -0.81
SED1YDR077W UTP6Q02354 440 aaKnown RBP10.02□□□□□ -0.81
SED1YDR077W SXM1Q04175 944 aaKnown RBP10.02□□□□□ -0.81
SED1YDR077W YOR059CQ08448 450 aaKnown RBP10.02□□□□□ -0.81
SED1YDR077W CHS1P08004 1131 aa10.01□□□□□ -0.81
SED1YDR077W HEM1P09950 548 aaPredicted RBP10.01□□□□□ -0.81
SED1YDR077W VBA3P25594 458 aa10.01□□□□□ -0.81
SED1YDR077W SEC1P30619 724 aaKnown RBP10.01□□□□□ -0.81
SED1YDR077W VBA5P36172 582 aa10.01□□□□□ -0.81
SED1YDR077W PCA1P38360 1216 aa10.01□□□□□ -0.81
SED1YDR077W PCM1P38628 557 aaKnown RBP10.01□□□□□ -0.81
SED1YDR077W YHL026CP38740 315 aa10.01□□□□□ -0.81
SED1YDR077W TVP23P38962 199 aa10.01□□□□□ -0.81
SED1YDR077W CIN4P39110 191 aa10.01□□□□□ -0.81
SED1YDR077W SNZ3P43545 298 aa10.01□□□□□ -0.81
SED1YDR077W INP52P50942 1183 aa10.01□□□□□ -0.81
SED1YDR077W SNZ2P53824 298 aa10.01□□□□□ -0.81
SED1YDR077W RNT1Q02555 471 aa10.01□□□□□ -0.81
SED1YDR077W ARO80Q04052 950 aa10.01□□□□□ -0.81
SED1YDR077W TIF35Q04067 274 aaKnown RBP10.01□□□□□ -0.81
SED1YDR077W YDR278CQ05612 105 aa10.01□□□□□ -0.81
SED1YDR077W CDD1Q06549 142 aa10.01□□□□□ -0.81
SED1YDR077W VPS3P23643 1011 aa10□□□□□ -0.81
SED1YDR077W SAT4P25333 603 aaKnown RBP10□□□□□ -0.81
SED1YDR077W RSA4P25382 515 aaKnown RBP10□□□□□ -0.81
SED1YDR077W CAP1P28495 268 aaKnown RBP10□□□□□ -0.81
SED1YDR077W MRP4P32902 394 aa10□□□□□ -0.81
SED1YDR077W KDX1P36005 433 aa10□□□□□ -0.81
SED1YDR077W CAB3P36076 571 aa10□□□□□ -0.81
SED1YDR077W MUD2P36084 527 aaKnown RBP10□□□□□ -0.81
SED1YDR077W HEL1P36113 551 aa10□□□□□ -0.81
SED1YDR077W LAS1P36146 502 aaPredicted RBP10□□□□□ -0.81
SED1YDR077W ECM2P38241 364 aaKnown RBP10□□□□□ -0.81
SED1YDR077W QNS1P38795 714 aaKnown RBP10□□□□□ -0.81
SED1YDR077W ESL1P40456 1118 aa10□□□□□ -0.81
SED1YDR077W YNL320WP42840 284 aa10□□□□□ -0.81
SED1YDR077W RPL22BP56628 122 aaKnown RBP10□□□□□ -0.81
SED1YDR077W SDH5Q08230 162 aa10□□□□□ -0.81
SED1YDR077W YOR022CQ12204 715 aa10□□□□□ -0.81
SED1YDR077W RUD3Q12234 484 aaKnown RBP10□□□□□ -0.81
SED1YDR077W RAD1P06777 1100 aa9.99□□□□□ -0.81
SED1YDR077W EST1P17214 699 aaPredicted RBP9.99□□□□□ -0.81
SED1YDR077W PRP9P19736 530 aaKnown RBP9.99□□□□□ -0.81
SED1YDR077W SFL1P20134 766 aa9.99□□□□□ -0.81
SED1YDR077W SIS1P25294 352 aaKnown RBP9.99□□□□□ -0.81
SED1YDR077W POT1P27796 417 aaKnown RBP RIP-Chip data9.99□□□□□ -0.81not detected
SED1YDR077W CYS3P31373 394 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 150.6 ms