RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	AKL1	P38080	1108 aa	Known RBP	4.05	□□□□□ -1.76
PBP4	YDL053C	MAL31	P38156	614 aa		4.05	□□□□□ -1.76
PBP4	YDL053C	TDA3	P38758	523 aa		4.05	□□□□□ -1.76
PBP4	YDL053C	FMP52	P40008	231 aa		4.05	□□□□□ -1.76
PBP4	YDL053C	GET2	P40056	285 aa		4.05	□□□□□ -1.76
PBP4	YDL053C	YNL195C	P40168	261 aa		4.05	□□□□□ -1.76
PBP4	YDL053C	GPG1	P53130	126 aa		4.05	□□□□□ -1.76
PBP4	YDL053C	GPD1	Q00055	391 aa	Known RBP	4.05	□□□□□ -1.76
PBP4	YDL053C	RGC1	Q06108	1083 aa	Known RBP	4.05	□□□□□ -1.76
PBP4	YDL053C	ACF2	Q12168	779 aa		4.05	□□□□□ -1.76
PBP4	YDL053C	MVD1	P32377	396 aa	Known RBP	4.04	□□□□□ -1.76
PBP4	YDL053C	HIR1	P32479	840 aa		4.04	□□□□□ -1.76
PBP4	YDL053C	YHR202W	P38887	602 aa		4.04	□□□□□ -1.76
PBP4	YDL053C	BEM4	P39011	633 aa		4.04	□□□□□ -1.76
PBP4	YDL053C	NUP60	P39705	539 aa		4.04	□□□□□ -1.76
PBP4	YDL053C	NOP9	P47077	666 aa	Known RBP	4.04	□□□□□ -1.76
PBP4	YDL053C	YGR153W	P48238	217 aa		4.04	□□□□□ -1.76
PBP4	YDL053C	YGR237C	P50089	785 aa		4.04	□□□□□ -1.76
PBP4	YDL053C	COX18	P53239	316 aa		4.04	□□□□□ -1.76
PBP4	YDL053C	MCH5	Q08777	521 aa		4.04	□□□□□ -1.76
PBP4	YDL053C	ECM3	Q99252	613 aa		4.04	□□□□□ -1.76
PBP4	YDL053C	SIR3	P06701	978 aa		4.03	□□□□□ -1.76
PBP4	YDL053C	YKR075C	P36155	307 aa		4.03	□□□□□ -1.76
PBP4	YDL053C	YHL017W	P38745	532 aa		4.03	□□□□□ -1.76
PBP4	YDL053C	PCL5	P38794	229 aa		4.03	□□□□□ -1.76
PBP4	YDL053C	REV7	P38927	245 aa		4.03	□□□□□ -1.76
PBP4	YDL053C	TEL2	P53038	688 aa		4.03	□□□□□ -1.76
PBP4	YDL053C	YGL081W	P53156	320 aa		4.03	□□□□□ -1.76
PBP4	YDL053C	RIA1	P53893	1110 aa		4.03	□□□□□ -1.76
PBP4	YDL053C	TIM44	Q01852	431 aa		4.03	□□□□□ -1.76
PBP4	YDL053C	ISA1	Q07821	250 aa	Predicted RBP	4.03	□□□□□ -1.76
PBP4	YDL053C	SGO1	Q08490	590 aa		4.03	□□□□□ -1.76
PBP4	YDL053C	PEX1	P24004	1043 aa		4.02	□□□□□ -1.77
PBP4	YDL053C	IMG2	P25642	146 aa	Predicted RBP	4.02	□□□□□ -1.77
PBP4	YDL053C	SFB3	P38810	929 aa		4.02	□□□□□ -1.77
PBP4	YDL053C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
PBP4	YDL053C	UBP12	P39538	1254 aa		4.02	□□□□□ -1.77
PBP4	YDL053C	CCT5	P40413	562 aa	Known RBP	4.02	□□□□□ -1.77
PBP4	YDL053C	GPP1	P41277	250 aa	Known RBP	4.02	□□□□□ -1.77
PBP4	YDL053C	GZF3	P42944	551 aa	Known RBP	4.02	□□□□□ -1.77
PBP4	YDL053C	PAN2	P53010	1115 aa	Predicted RBP	4.02	□□□□□ -1.77
PBP4	YDL053C	ECM9	Q02202	377 aa		4.02	□□□□□ -1.77
PBP4	YDL053C	HBT1	Q07653	1046 aa	Known RBP	4.02	□□□□□ -1.77
PBP4	YDL053C	FAP7	Q12055	197 aa	Predicted RBP	4.02	□□□□□ -1.77
PBP4	YDL053C	YKL033W-A	Q86ZR7	236 aa		4.02	□□□□□ -1.77
PBP4	YDL053C	RSC8	P43609	557 aa	Known RBP	4.01	□□□□□ -1.77
PBP4	YDL053C	BFA1	P47113	574 aa		4.01	□□□□□ -1.77
PBP4	YDL053C	UBA2	P52488	636 aa		4.01	□□□□□ -1.77
PBP4	YDL053C	HFD1	Q04458	532 aa		4.01	□□□□□ -1.77
PBP4	YDL053C	TMN2	Q04562	672 aa		4.01	□□□□□ -1.77
PBP4	YDL053C	YLR407W	Q06070	228 aa		4.01	□□□□□ -1.77
PBP4	YDL053C	THI22	Q06490	572 aa		4.01	□□□□□ -1.77
PBP4	YDL053C	VPS36	Q06696	566 aa		4.01	□□□□□ -1.77
PBP4	YDL053C	VHS3	Q08438	674 aa		4.01	□□□□□ -1.77
PBP4	YDL053C	YTM1	Q12024	460 aa	Predicted RBP	4.01	□□□□□ -1.77
PBP4	YDL053C	RPS21B	Q3E754	87 aa	Known RBP	4.01	□□□□□ -1.77
PBP4	YDL053C	SWI6	P09959	803 aa		4	□□□□□ -1.77
PBP4	YDL053C	YKU70	P32807	602 aa		4	□□□□□ -1.77
PBP4	YDL053C	PHO11	P35842	467 aa		4	□□□□□ -1.77
PBP4	YDL053C	PHO12	P38693	467 aa		4	□□□□□ -1.77
PBP4	YDL053C	HXT6	P39003	570 aa	Known RBP	4	□□□□□ -1.77
PBP4	YDL053C	HXT7	P39004	570 aa		4	□□□□□ -1.77
PBP4	YDL053C	OAF1	P39720	1047 aa	Predicted RBP	4	□□□□□ -1.77
PBP4	YDL053C	SDS3	P40505	327 aa		4	□□□□□ -1.77
PBP4	YDL053C	FHN1	P53279	174 aa		4	□□□□□ -1.77
PBP4	YDL053C	YAP1802	P53309	568 aa		4	□□□□□ -1.77
PBP4	YDL053C	GND2	P53319	492 aa		4	□□□□□ -1.77
PBP4	YDL053C	SSL2	Q00578	843 aa		4	□□□□□ -1.77
PBP4	YDL053C	ERG20	P08524	352 aa	Known RBP	3.99	□□□□□ -1.77
PBP4	YDL053C	FRS1	P15624	595 aa	Known RBP	3.99	□□□□□ -1.77
PBP4	YDL053C	SEC65	P29478	273 aa		3.99	□□□□□ -1.77
PBP4	YDL053C	PET127	P32606	800 aa		3.99	□□□□□ -1.77
PBP4	YDL053C	YEN1	P40028	759 aa		3.99	□□□□□ -1.77
PBP4	YDL053C	MNN11	P46985	422 aa	Known RBP	3.99	□□□□□ -1.77
PBP4	YDL053C	RCR2	Q03446	210 aa	Known RBP	3.99	□□□□□ -1.77
PBP4	YDL053C	YMR210W	Q03649	449 aa		3.99	□□□□□ -1.77
PBP4	YDL053C	YPS7	Q06325	596 aa		3.99	□□□□□ -1.77
PBP4	YDL053C	DIA2	Q08496	732 aa	Predicted RBP	3.99	□□□□□ -1.77
PBP4	YDL053C	ZRT2	Q12436	422 aa		3.99	□□□□□ -1.77
PBP4	YDL053C	GRX4	P32642	244 aa		3.98	□□□□□ -1.77
PBP4	YDL053C	BCS1	P32839	456 aa		3.98	□□□□□ -1.77
PBP4	YDL053C	SEC6	P32844	805 aa		3.98	□□□□□ -1.77
PBP4	YDL053C	YPT7	P32939	208 aa		3.98	□□□□□ -1.77
PBP4	YDL053C	MTH1	P35198	433 aa		3.98	□□□□□ -1.77
PBP4	YDL053C	OAF3	P36023	863 aa		3.98	□□□□□ -1.77
PBP4	YDL053C	CBR1	P38626	284 aa	Known RBP	3.98	□□□□□ -1.77
PBP4	YDL053C	BIT61	P47041	543 aa		3.98	□□□□□ -1.77
PBP4	YDL053C	SMX3	P54999	86 aa	Predicted RBP	3.98	□□□□□ -1.77
PBP4	YDL053C	YHM2	Q04013	314 aa		3.98	□□□□□ -1.77
PBP4	YDL053C	HFI1	Q12060	488 aa		3.98	□□□□□ -1.77
PBP4	YDL053C	MLH3	Q12083	715 aa		3.98	□□□□□ -1.77
PBP4	YDL053C	CLF1	Q12309	687 aa	Predicted RBP	3.98	□□□□□ -1.77
PBP4	YDL053C	POM34	Q12445	299 aa		3.98	□□□□□ -1.77
PBP4	YDL053C	RPS17A	P02407	136 aa	Known RBP	3.97	□□□□□ -1.77
PBP4	YDL053C	RPS21A	P0C0V8	87 aa	Known RBP	3.97	□□□□□ -1.77
PBP4	YDL053C	RPS17B	P14127	136 aa	Known RBP	3.97	□□□□□ -1.77
PBP4	YDL053C	THR1	P17423	357 aa	Known RBP	3.97	□□□□□ -1.77
PBP4	YDL053C	IME1	P21190	360 aa		3.97	□□□□□ -1.77
PBP4	YDL053C	DID4	P36108	232 aa		3.97	□□□□□ -1.77
PBP4	YDL053C	FAT1	P38225	669 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms