RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP16	YDL004W	PAN2	P53010	1115 aa	Predicted RBP	4.93	□□□□□ -1.62
ATP16	YDL004W	UTP14	Q04500	899 aa	Known RBP	4.93	□□□□□ -1.62
ATP16	YDL004W	DCS2	Q12123	353 aa		4.93	□□□□□ -1.62
ATP16	YDL004W	ECM3	Q99252	613 aa		4.93	□□□□□ -1.62
ATP16	YDL004W	SSZ1	P38788	538 aa	Known RBP	4.92	□□□□□ -1.62
ATP16	YDL004W	YHR202W	P38887	602 aa		4.92	□□□□□ -1.62
ATP16	YDL004W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
ATP16	YDL004W	GPD1	Q00055	391 aa	Known RBP	4.92	□□□□□ -1.62
ATP16	YDL004W	SSL2	Q00578	843 aa		4.92	□□□□□ -1.62
ATP16	YDL004W	ISA1	Q07821	250 aa	Predicted RBP	4.92	□□□□□ -1.62
ATP16	YDL004W	IRC10	Q08118	586 aa		4.92	□□□□□ -1.62
ATP16	YDL004W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
ATP16	YDL004W	AKL1	P38080	1108 aa	Known RBP	4.91	□□□□□ -1.62
ATP16	YDL004W	GID8	P40208	455 aa		4.91	□□□□□ -1.62
ATP16	YDL004W	STU2	P46675	888 aa		4.91	□□□□□ -1.62
ATP16	YDL004W	NOP9	P47077	666 aa	Known RBP	4.91	□□□□□ -1.62
ATP16	YDL004W	YJR039W	P47107	1121 aa		4.91	□□□□□ -1.62
ATP16	YDL004W	MRH1	Q12117	320 aa	Predicted RBP	4.91	□□□□□ -1.62
ATP16	YDL004W	YKL033W-A	Q86ZR7	236 aa		4.91	□□□□□ -1.62
ATP16	YDL004W	NUG1	P40010	520 aa	Known RBP	4.9	□□□□□ -1.63
ATP16	YDL004W	YJR096W	P47137	282 aa		4.9	□□□□□ -1.63
ATP16	YDL004W	HMO1	Q03973	246 aa	Known RBP	4.9	□□□□□ -1.63
ATP16	YDL004W	THI73	Q07904	523 aa		4.9	□□□□□ -1.63
ATP16	YDL004W	YGR161W-C	Q3E744	92 aa		4.9	□□□□□ -1.63
ATP16	YDL004W	SIR3	P06701	978 aa		4.89	□□□□□ -1.63
ATP16	YDL004W	PRP19	P32523	503 aa	Known RBP	4.89	□□□□□ -1.63
ATP16	YDL004W	PHO11	P35842	467 aa		4.89	□□□□□ -1.63
ATP16	YDL004W	YKR075C	P36155	307 aa		4.89	□□□□□ -1.63
ATP16	YDL004W	TYS1	P36421	394 aa	Known RBP	4.89	□□□□□ -1.63
ATP16	YDL004W	PHO12	P38693	467 aa		4.89	□□□□□ -1.63
ATP16	YDL004W	TDA3	P38758	523 aa		4.89	□□□□□ -1.63
ATP16	YDL004W	CRP1	P38845	465 aa	Known RBP	4.89	□□□□□ -1.63
ATP16	YDL004W	RSC8	P43609	557 aa	Known RBP	4.89	□□□□□ -1.63
ATP16	YDL004W	YAP1802	P53309	568 aa		4.89	□□□□□ -1.63
ATP16	YDL004W	ZRT2	Q12436	422 aa		4.89	□□□□□ -1.63
ATP16	YDL004W	TAD3	Q9URQ3	322 aa		4.89	□□□□□ -1.63
ATP16	YDL004W	PEX1	P24004	1043 aa		4.88	□□□□□ -1.63
ATP16	YDL004W	CKB2	P38930	258 aa		4.88	□□□□□ -1.63
ATP16	YDL004W	BFA1	P47113	574 aa		4.88	□□□□□ -1.63
ATP16	YDL004W	VPS36	Q06696	566 aa		4.88	□□□□□ -1.63
ATP16	YDL004W	DIA2	Q08496	732 aa	Predicted RBP	4.88	□□□□□ -1.63
ATP16	YDL004W	MLH3	Q12083	715 aa		4.88	□□□□□ -1.63
ATP16	YDL004W	CDC43	P18898	376 aa		4.87	□□□□□ -1.63
ATP16	YDL004W	KIN3	P22209	435 aa		4.87	□□□□□ -1.63
ATP16	YDL004W	MAL31	P38156	614 aa		4.87	□□□□□ -1.63
ATP16	YDL004W	FPR3	P38911	411 aa	Known RBP	4.87	□□□□□ -1.63
ATP16	YDL004W	QRI1	P43123	477 aa	Known RBP	4.87	□□□□□ -1.63
ATP16	YDL004W	SMX3	P54999	86 aa	Predicted RBP	4.87	□□□□□ -1.63
ATP16	YDL004W	VHS3	Q08438	674 aa		4.87	□□□□□ -1.63
ATP16	YDL004W	IMG2	P25642	146 aa	Predicted RBP	4.86	□□□□□ -1.63
ATP16	YDL004W	BEM4	P39011	633 aa		4.86	□□□□□ -1.63
ATP16	YDL004W	NDC80	P40460	691 aa		4.86	□□□□□ -1.63
ATP16	YDL004W	RET2	P43621	546 aa		4.86	□□□□□ -1.63
ATP16	YDL004W	FHN1	P53279	174 aa		4.86	□□□□□ -1.63
ATP16	YDL004W	YNR029C	P53729	429 aa	Known RBP	4.86	□□□□□ -1.63
ATP16	YDL004W	UME1	Q03010	460 aa		4.86	□□□□□ -1.63
ATP16	YDL004W	MTQ2	Q03920	221 aa	Predicted RBP	4.86	□□□□□ -1.63
ATP16	YDL004W	THI22	Q06490	572 aa		4.86	□□□□□ -1.63
ATP16	YDL004W	USV1	Q12132	391 aa		4.86	□□□□□ -1.63
ATP16	YDL004W	NUP145	P49687	1317 aa		4.86	□□□□□ -1.63
ATP16	YDL004W	BCS1	P32839	456 aa		4.85	□□□□□ -1.63
ATP16	YDL004W	TDP1	P38319	544 aa		4.85	□□□□□ -1.63
ATP16	YDL004W	YJL206C	P39529	758 aa		4.85	□□□□□ -1.63
ATP16	YDL004W	YGR153W	P48238	217 aa		4.85	□□□□□ -1.63
ATP16	YDL004W	YMR210W	Q03649	449 aa		4.85	□□□□□ -1.63
ATP16	YDL004W	YLR407W	Q06070	228 aa		4.85	□□□□□ -1.63
ATP16	YDL004W	ERG20	P08524	352 aa	Known RBP	4.84	□□□□□ -1.63
ATP16	YDL004W	THR1	P17423	357 aa	Known RBP	4.84	□□□□□ -1.63
ATP16	YDL004W	YKU70	P32807	602 aa		4.84	□□□□□ -1.63
ATP16	YDL004W	PIG2	P40187	538 aa		4.84	□□□□□ -1.63
ATP16	YDL004W	PMT3	P47190	753 aa		4.84	□□□□□ -1.63
ATP16	YDL004W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
ATP16	YDL004W	RPS21B	Q3E754	87 aa	Known RBP	4.84	□□□□□ -1.63
ATP16	YDL004W	FRS1	P15624	595 aa	Known RBP	4.83	□□□□□ -1.64
ATP16	YDL004W	BRN1	P38170	754 aa		4.83	□□□□□ -1.64
ATP16	YDL004W	BIT2	P38346	545 aa		4.83	□□□□□ -1.64
ATP16	YDL004W	ARG2	P40360	574 aa		4.83	□□□□□ -1.64
ATP16	YDL004W	YIL077C	P40508	320 aa		4.83	□□□□□ -1.64
ATP16	YDL004W	CCT7	P42943	550 aa	Known RBP	4.83	□□□□□ -1.64
ATP16	YDL004W	CTR1	P49573	406 aa		4.83	□□□□□ -1.64
ATP16	YDL004W	VPS73	P53142	486 aa	Known RBP	4.83	□□□□□ -1.64
ATP16	YDL004W	ATG4	P53867	494 aa		4.83	□□□□□ -1.64
ATP16	YDL004W	CHS5	Q12114	671 aa	Known RBP	4.83	□□□□□ -1.64
ATP16	YDL004W	SUT2	Q12286	268 aa		4.83	□□□□□ -1.64
ATP16	YDL004W	CLF1	Q12309	687 aa	Predicted RBP	4.83	□□□□□ -1.64
ATP16	YDL004W	GFA1	P14742	717 aa	Known RBP	4.82	□□□□□ -1.64
ATP16	YDL004W	SEC15	P22224	910 aa		4.82	□□□□□ -1.64
ATP16	YDL004W	FEN2	P25621	512 aa	Known RBP	4.82	□□□□□ -1.64
ATP16	YDL004W	PET127	P32606	800 aa		4.82	□□□□□ -1.64
ATP16	YDL004W	SET3	P36124	751 aa		4.82	□□□□□ -1.64
ATP16	YDL004W	RFX1	P48743	811 aa		4.82	□□□□□ -1.64
ATP16	YDL004W	RCR2	Q03446	210 aa	Known RBP	4.82	□□□□□ -1.64
ATP16	YDL004W	YPS7	Q06325	596 aa		4.82	□□□□□ -1.64
ATP16	YDL004W	POM34	Q12445	299 aa		4.82	□□□□□ -1.64
ATP16	YDL004W	RPS9B	P05755	195 aa	Known RBP	4.81	□□□□□ -1.64
ATP16	YDL004W	GLG1	P36143	616 aa		4.81	□□□□□ -1.64
ATP16	YDL004W	UBS1	P38290	277 aa		4.81	□□□□□ -1.64
ATP16	YDL004W	BIT61	P47041	543 aa		4.81	□□□□□ -1.64
ATP16	YDL004W	TAH11	P47112	604 aa		4.81	□□□□□ -1.64
ATP16	YDL004W	YGR237C	P50089	785 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms