RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeastyeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP30YCR021C AZR1P50080 613 aa4.4□□□□□ -1.71
HSP30YCR021C MNP1P53163 194 aaPredicted RBP4.4□□□□□ -1.71
HSP30YCR021C BUD9P53226 547 aa4.4□□□□□ -1.71
HSP30YCR021C CEF1Q03654 590 aaPredicted RBP4.4□□□□□ -1.71
HSP30YCR021C TRS130Q03660 1102 aa4.4□□□□□ -1.71
HSP30YCR021C GFD1Q04839 188 aaKnown RBP4.4□□□□□ -1.71
HSP30YCR021C SHS1Q07657 551 aa4.4□□□□□ -1.71
HSP30YCR021C MLH2Q07980 695 aa4.4□□□□□ -1.71
HSP30YCR021C SMC5Q08204 1093 aa4.4□□□□□ -1.71
HSP30YCR021C ETT1Q08421 412 aaKnown RBP4.4□□□□□ -1.71
HSP30YCR021C RTP1Q12751 981 aa4.4□□□□□ -1.71
HSP30YCR021C PCK1P10963 549 aa4.39□□□□□ -1.71
HSP30YCR021C PHO8P11491 566 aa4.39□□□□□ -1.71
HSP30YCR021C MUD1P32605 298 aaKnown RBP4.39□□□□□ -1.71
HSP30YCR021C TMT1P32643 299 aa4.39□□□□□ -1.71
HSP30YCR021C COT1P32798 439 aa4.39□□□□□ -1.71
HSP30YCR021C XRS2P33301 854 aa4.39□□□□□ -1.71
HSP30YCR021C MFT1P33441 392 aaKnown RBP4.39□□□□□ -1.71
HSP30YCR021C MIC60P36112 540 aa4.39□□□□□ -1.71
HSP30YCR021C DRE2P36152 348 aa4.39□□□□□ -1.71
HSP30YCR021C PCH2P38126 564 aa4.39□□□□□ -1.71
HSP30YCR021C DYS1P38791 387 aa4.39□□□□□ -1.71
HSP30YCR021C CTM1P38818 585 aa4.39□□□□□ -1.71
HSP30YCR021C ZAP1P47043 880 aa4.39□□□□□ -1.71
HSP30YCR021C SGM1P47166 707 aa4.39□□□□□ -1.71
HSP30YCR021C HSH155P49955 971 aaKnown RBP4.39□□□□□ -1.71
HSP30YCR021C CUL3P53202 744 aa4.39□□□□□ -1.71
HSP30YCR021C TIM8P57744 87 aa4.39□□□□□ -1.71
HSP30YCR021C VTC3Q02725 835 aa4.39□□□□□ -1.71
HSP30YCR021C MUK1Q02866 612 aa4.39□□□□□ -1.71
HSP30YCR021C UME1Q03010 460 aa4.39□□□□□ -1.71
HSP30YCR021C UTP14Q04500 899 aaKnown RBP4.39□□□□□ -1.71
HSP30YCR021C HCR1Q05775 265 aaKnown RBP4.39□□□□□ -1.71
HSP30YCR021C CDC53Q12018 815 aaKnown RBP4.39□□□□□ -1.71
HSP30YCR021C VPS13Q07878 3144 aa4.38□□□□□ -1.71
HSP30YCR021C RPL22AP05749 121 aaKnown RBP4.38□□□□□ -1.71
HSP30YCR021C TAF13P11747 167 aa4.38□□□□□ -1.71
HSP30YCR021C CHS2P14180 963 aa4.38□□□□□ -1.71
HSP30YCR021C SPO12P17123 173 aa4.38□□□□□ -1.71
HSP30YCR021C POT1P27796 417 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
HSP30YCR021C PRR1P28708 518 aa4.38□□□□□ -1.71
HSP30YCR021C GPT2P36148 743 aa4.38□□□□□ -1.71
HSP30YCR021C UBP13P38187 747 aa4.38□□□□□ -1.71
HSP30YCR021C IES1P43579 692 aa4.38□□□□□ -1.71
HSP30YCR021C ASN1P49089 572 aaKnown RBP4.38□□□□□ -1.71
HSP30YCR021C NRD1P53617 575 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
HSP30YCR021C YPL034WQ03083 165 aa4.38□□□□□ -1.71
HSP30YCR021C SNU56Q03782 492 aaKnown RBP4.38□□□□□ -1.71
HSP30YCR021C MED1Q12321 566 aa4.38□□□□□ -1.71
HSP30YCR021C FKS1P38631 1876 aaKnown RBP4.38□□□□□ -1.71
HSP30YCR021C ECM29P38737 1868 aa4.38□□□□□ -1.71
HSP30YCR021C AI3P03877 415 aa4.37□□□□□ -1.71
HSP30YCR021C PHO13P19881 312 aa4.37□□□□□ -1.71
HSP30YCR021C SPO11P23179 398 aa4.37□□□□□ -1.71
HSP30YCR021C RPC53P25441 422 aa4.37□□□□□ -1.71
HSP30YCR021C MSS51P32335 436 aa4.37□□□□□ -1.71
HSP30YCR021C CBF2P32504 956 aa4.37□□□□□ -1.71
HSP30YCR021C PEX2P32800 271 aa4.37□□□□□ -1.71
HSP30YCR021C PIN4P34217 668 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71 RIP-Chip
HSP30YCR021C MPE1P35728 441 aaKnown RBP4.37□□□□□ -1.71
HSP30YCR021C GIP1P38229 639 aa4.37□□□□□ -1.71
HSP30YCR021C MMM1P41800 426 aa4.37□□□□□ -1.71
HSP30YCR021C STB4P50104 949 aa4.37□□□□□ -1.71
HSP30YCR021C VPS75P53853 264 aa4.37□□□□□ -1.71
HSP30YCR021C SEC5P89102 971 aa4.37□□□□□ -1.71
HSP30YCR021C YDR278CQ05612 105 aa4.37□□□□□ -1.71
HSP30YCR021C CDD1Q06549 142 aa4.37□□□□□ -1.71
HSP30YCR021C YLR001CQ07895 862 aa4.37□□□□□ -1.71
HSP30YCR021C ATG9Q12142 997 aa4.37□□□□□ -1.71
HSP30YCR021C RRP6Q12149 733 aaKnown RBP4.37□□□□□ -1.71
HSP30YCR021C SLP1Q12232 587 aa4.37□□□□□ -1.71
HSP30YCR021C PPR1P07272 904 aaPredicted RBP4.36□□□□□ -1.71
HSP30YCR021C SSB1P11484 613 aaKnown RBP4.36□□□□□ -1.71
HSP30YCR021C WHI2P12611 486 aa4.36□□□□□ -1.71
HSP30YCR021C GLN3P18494 730 aa4.36□□□□□ -1.71
HSP30YCR021C ADE2P21264 571 aaKnown RBP4.36□□□□□ -1.71
HSP30YCR021C RRT12P25381 491 aa4.36□□□□□ -1.71
HSP30YCR021C RME1P32338 300 aaKnown RBP4.36□□□□□ -1.71
HSP30YCR021C SMC1P32908 1225 aa4.36□□□□□ -1.71
HSP30YCR021C AGP2P38090 596 aa4.36□□□□□ -1.71
HSP30YCR021C MRX3P38172 270 aa4.36□□□□□ -1.71
HSP30YCR021C VFA1P40080 203 aa4.36□□□□□ -1.71
HSP30YCR021C SSB2P40150 613 aaKnown RBP4.36□□□□□ -1.71
HSP30YCR021C AIM21P40563 679 aa4.36□□□□□ -1.71
HSP30YCR021C ASG7P46993 209 aa4.36□□□□□ -1.71
HSP30YCR021C MDR1P53258 950 aa4.36□□□□□ -1.71
HSP30YCR021C DOT1Q04089 582 aaKnown RBP4.36□□□□□ -1.71
HSP30YCR021C CUR1Q06469 252 aa4.36□□□□□ -1.71
HSP30YCR021C QCR6P00127 147 aa4.35□□□□□ -1.71
HSP30YCR021C CIT2P08679 460 aa4.35□□□□□ -1.71
HSP30YCR021C ASP3-2P0CX77 362 aa4.35□□□□□ -1.71
HSP30YCR021C ASP3-3P0CX78 362 aa4.35□□□□□ -1.71
HSP30YCR021C ASP3-4P0CX79 362 aa4.35□□□□□ -1.71
HSP30YCR021C ASP3-1P0CZ17 362 aa4.35□□□□□ -1.71
HSP30YCR021C SNA3P14359 133 aa4.35□□□□□ -1.71
HSP30YCR021C CYC8P14922 966 aa4.35□□□□□ -1.71
HSP30YCR021C CDC42P19073 191 aa4.35□□□□□ -1.71
HSP30YCR021C MSN1P22148 382 aa4.35□□□□□ -1.71
HSP30YCR021C DAL2P25335 343 aa4.35□□□□□ -1.71
HSP30YCR021C DPH2P32461 534 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms